RNA–Protein interactions for RNA: YBL006C

LDB7, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene LDB7, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB7YBL006C LEU9Q12166 604 aaKnown RBP6.67□□□□□ -1.34
LDB7YBL006C YOR114WQ12219 294 aa6.67□□□□□ -1.34
LDB7YBL006C YMR030W-AQ3E760 96 aa6.67□□□□□ -1.34
LDB7YBL006C FAS1P07149 2051 aaKnown RBP6.67□□□□□ -1.34
LDB7YBL006C UTP20P35194 2493 aaKnown RBP6.66□□□□□ -1.34
LDB7YBL006C TRX2P22803 104 aaKnown RBP6.66□□□□□ -1.34
LDB7YBL006C GCD11P32481 527 aaKnown RBP6.66□□□□□ -1.34
LDB7YBL006C MRPL15P36523 253 aa6.66□□□□□ -1.34
LDB7YBL006C INM1P38710 295 aa6.66□□□□□ -1.34
LDB7YBL006C GIC1P38785 314 aa6.66□□□□□ -1.34
LDB7YBL006C PTI1P39927 425 aaPredicted RBP6.66□□□□□ -1.34
LDB7YBL006C SEC28P40509 296 aaKnown RBP6.66□□□□□ -1.34
LDB7YBL006C ASK10P48361 1146 aa6.66□□□□□ -1.34
LDB7YBL006C MAL13P53338 473 aa6.66□□□□□ -1.34
LDB7YBL006C HOS3Q02959 697 aaKnown RBP6.66□□□□□ -1.34
LDB7YBL006C IRC13Q08630 104 aa6.66□□□□□ -1.34
LDB7YBL006C UBX3Q12229 455 aa6.66□□□□□ -1.34
LDB7YBL006C AI4P03878 556 aa6.65□□□□□ -1.34
LDB7YBL006C LAT1P12695 482 aaKnown RBP6.65□□□□□ -1.34
LDB7YBL006C KIN2P13186 1147 aaKnown RBP6.65□□□□□ -1.34
LDB7YBL006C PRO1P32264 428 aa6.65□□□□□ -1.34
LDB7YBL006C SFA1P32771 386 aa6.65□□□□□ -1.34
LDB7YBL006C PTM1P32857 523 aa6.65□□□□□ -1.34
LDB7YBL006C CYM1P32898 989 aa6.65□□□□□ -1.34
LDB7YBL006C FTH1P38310 465 aa6.65□□□□□ -1.34
LDB7YBL006C NPT1P39683 429 aaKnown RBP6.65□□□□□ -1.34
LDB7YBL006C YJR149WP47177 404 aa6.65□□□□□ -1.34
LDB7YBL006C CLD1P53264 445 aa6.65□□□□□ -1.34
LDB7YBL006C SUR7P54003 302 aa6.65□□□□□ -1.34
LDB7YBL006C PEX25Q02969 394 aa6.65□□□□□ -1.34
LDB7YBL006C SPO20Q04359 397 aa6.65□□□□□ -1.34
LDB7YBL006C BCH1Q05029 724 aa6.65□□□□□ -1.34
LDB7YBL006C YMR034CQ05131 434 aaPredicted RBP6.65□□□□□ -1.34
LDB7YBL006C ENT2Q05785 613 aa6.65□□□□□ -1.34
LDB7YBL006C CRN1Q06440 651 aa6.65□□□□□ -1.34
LDB7YBL006C HAL9Q12180 1030 aa6.65□□□□□ -1.34
LDB7YBL006C HSP42Q12329 375 aa6.65□□□□□ -1.34
LDB7YBL006C PNO1Q99216 274 aaKnown RBP6.65□□□□□ -1.34
LDB7YBL006C AMD2P22580 549 aa6.64□□□□□ -1.35
LDB7YBL006C AAD3P25612 363 aa6.64□□□□□ -1.35
LDB7YBL006C LYP1P32487 611 aa6.64□□□□□ -1.35
LDB7YBL006C ETR1P38071 380 aa6.64□□□□□ -1.35
LDB7YBL006C EHT1P38295 451 aa6.64□□□□□ -1.35
LDB7YBL006C YHR210CP38893 341 aa6.64□□□□□ -1.35
LDB7YBL006C AXL2P38928 823 aa6.64□□□□□ -1.35
LDB7YBL006C GGC1P38988 300 aa6.64□□□□□ -1.35
LDB7YBL006C VRG4P40107 337 aa6.64□□□□□ -1.35
LDB7YBL006C NDE1P40215 560 aa6.64□□□□□ -1.35
LDB7YBL006C GCD14P46959 383 aaPredicted RBP6.64□□□□□ -1.35
LDB7YBL006C KTR5P53966 522 aaPredicted RBP6.64□□□□□ -1.35
LDB7YBL006C ELP4Q02884 456 aaKnown RBP6.64□□□□□ -1.35
LDB7YBL006C TAF12Q03761 539 aa6.64□□□□□ -1.35
LDB7YBL006C RSF1Q05043 376 aa6.64□□□□□ -1.35
LDB7YBL006C PNP1Q05788 311 aa6.64□□□□□ -1.35
LDB7YBL006C VAM6Q07468 1049 aa6.64□□□□□ -1.35
LDB7YBL006C YOL024WQ08172 172 aa6.64□□□□□ -1.35
LDB7YBL006C YPR022CQ12139 1133 aa6.64□□□□□ -1.35
LDB7YBL006C MSL5Q12186 476 aaKnown RBP RIP-Chip data6.64□□□□□ -1.35not detected
LDB7YBL006C RSR1P13856 272 aa6.63□□□□□ -1.35
LDB7YBL006C URA4P20051 364 aa6.63□□□□□ -1.35
LDB7YBL006C AGP1P25376 633 aa6.63□□□□□ -1.35
LDB7YBL006C RPC37P36121 282 aa6.63□□□□□ -1.35
LDB7YBL006C YRO2P38079 344 aa6.63□□□□□ -1.35
LDB7YBL006C OLA1P38219 394 aaKnown RBP6.63□□□□□ -1.35
LDB7YBL006C HOS4P40480 1083 aa6.63□□□□□ -1.35
LDB7YBL006C YJR030CP47101 745 aa6.63□□□□□ -1.35
LDB7YBL006C TRM9P49957 279 aa6.63□□□□□ -1.35
LDB7YBL006C MDM34P53083 459 aa6.63□□□□□ -1.35
LDB7YBL006C SED5Q01590 340 aa6.63□□□□□ -1.35
LDB7YBL006C MRS2Q01926 470 aa6.63□□□□□ -1.35
LDB7YBL006C SHR3Q02774 210 aa6.63□□□□□ -1.35
LDB7YBL006C BUD22Q04347 519 aaKnown RBP6.63□□□□□ -1.35
LDB7YBL006C ROY1Q04847 553 aa6.63□□□□□ -1.35
LDB7YBL006C YLR177WQ06251 628 aa6.63□□□□□ -1.35
LDB7YBL006C YET3Q07451 203 aa6.63□□□□□ -1.35
LDB7YBL006C YPL066WQ12194 479 aa6.63□□□□□ -1.35
LDB7YBL006C RRP42Q12277 265 aaPredicted RBP6.63□□□□□ -1.35
LDB7YBL006C KCS1Q12494 1050 aa6.63□□□□□ -1.35
LDB7YBL006C TY4A-HQ6Q5P6 413 aa6.63□□□□□ -1.35
LDB7YBL006C STE3P06783 470 aa6.62□□□□□ -1.35
LDB7YBL006C GCY1P14065 312 aaKnown RBP RIP-Chip data6.62□□□□□ -1.35not detected
LDB7YBL006C VAC17P25591 423 aa6.62□□□□□ -1.35
LDB7YBL006C ADE1P27616 306 aa6.62□□□□□ -1.35
LDB7YBL006C SRB5P32585 307 aa6.62□□□□□ -1.35
LDB7YBL006C SEF1P34228 1148 aa6.62□□□□□ -1.35
LDB7YBL006C YKL100CP34248 587 aa6.62□□□□□ -1.35
LDB7YBL006C NUP120P35729 1037 aa6.62□□□□□ -1.35
LDB7YBL006C LAS1P36146 502 aaPredicted RBP6.62□□□□□ -1.35
LDB7YBL006C CTP1P38152 299 aa6.62□□□□□ -1.35
LDB7YBL006C SAP30P38429 201 aa6.62□□□□□ -1.35
LDB7YBL006C MNL1P38888 796 aa6.62□□□□□ -1.35
LDB7YBL006C DHH1P39517 506 aaKnown RBP6.62□□□□□ -1.35
LDB7YBL006C EMP65P40085 556 aa6.62□□□□□ -1.35
LDB7YBL006C IKS1P47042 667 aa6.62□□□□□ -1.35
LDB7YBL006C IBA57P47158 497 aa6.62□□□□□ -1.35
LDB7YBL006C PRO2P54885 456 aaKnown RBP6.62□□□□□ -1.35
LDB7YBL006C NHP10Q03435 203 aa6.62□□□□□ -1.35
LDB7YBL006C CSN9Q03981 162 aa6.62□□□□□ -1.35
LDB7YBL006C GIC2Q06648 383 aa6.62□□□□□ -1.35
LDB7YBL006C NOP6Q07623 225 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 39.6 ms