RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 ZNF236Q9UL36 1845 aa13.53□□□□□ -0.24
RFX1-204ENST00000588885 ICAM1P05362 532 aa13.53□□□□□ -0.24
RFX1-204ENST00000588885 AKR1A1P14550 325 aa13.53□□□□□ -0.24
RFX1-204ENST00000588885 ACVR2BQ13705 512 aa13.53□□□□□ -0.24
RFX1-204ENST00000588885 CCDC178Q5BJE1 867 aa13.53□□□□□ -0.24
RFX1-204ENST00000588885 MAMDC4Q6UXC1 1216 aa13.53□□□□□ -0.24
RFX1-204ENST00000588885 CYB5R4Q7L1T6 521 aa13.53□□□□□ -0.24
RFX1-204ENST00000588885 ARMCX2Q7L311 632 aa13.53□□□□□ -0.24
RFX1-204ENST00000588885 CCDC144CPQ8IYA2 1237 aa13.53□□□□□ -0.24
RFX1-204ENST00000588885 MSL3Q8N5Y2 521 aaKnown RBP13.53□□□□□ -0.24
RFX1-204ENST00000588885 UBAC1Q9BSL1 405 aa13.53□□□□□ -0.24
RFX1-204ENST00000588885 CNNM2Q9H8M5 875 aa13.53□□□□□ -0.24
RFX1-204ENST00000588885 VAT1LQ9HCJ6 419 aa13.53□□□□□ -0.24
RFX1-204ENST00000588885 FAM184BQ9ULE4 1060 aa13.53□□□□□ -0.24
RFX1-204ENST00000588885 ATP11BQ9Y2G3 1177 aa13.53□□□□□ -0.24
RFX1-204ENST00000588885 TNKSO95271 1327 aa13.53□□□□□ -0.24
RFX1-204ENST00000588885 RAD50Q92878 1312 aa13.53□□□□□ -0.24
RFX1-204ENST00000588885 SYNGAP1Q96PV0 1343 aa13.53□□□□□ -0.24
RFX1-204ENST00000588885 SMCHD1A6NHR9 2005 aa13.52□□□□□ -0.24
RFX1-204ENST00000588885 NFIBO00712 420 aa13.52□□□□□ -0.25
RFX1-204ENST00000588885 SGSM2O43147 1006 aa13.52□□□□□ -0.25
RFX1-204ENST00000588885 CYP21A2P08686 494 aa13.52□□□□□ -0.25
RFX1-204ENST00000588885 SNHG28P0DPA3 235 aa13.52□□□□□ -0.25
RFX1-204ENST00000588885 IRX5P78411 483 aaPredicted RBP13.52□□□□□ -0.25
RFX1-204ENST00000588885 BAATQ14032 418 aaPredicted RBP13.52□□□□□ -0.25
RFX1-204ENST00000588885 CCDC144BQ3MJ40 725 aa13.52□□□□□ -0.25
RFX1-204ENST00000588885 NOL8Q76FK4 1167 aaKnown RBP13.52□□□□□ -0.25
RFX1-204ENST00000588885 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.52□□□□□ -0.25
RFX1-204ENST00000588885 EEPD1Q7L9B9 569 aa13.52□□□□□ -0.25
RFX1-204ENST00000588885 ZNF467Q7Z7K2 595 aaPredicted RBP13.52□□□□□ -0.25
RFX1-204ENST00000588885 FAM133AQ8N9E0 248 aa13.52□□□□□ -0.25
RFX1-204ENST00000588885 ANKS1AQ92625 1134 aa13.52□□□□□ -0.25
RFX1-204ENST00000588885 CYP39A1Q9NYL5 469 aa13.52□□□□□ -0.25
RFX1-204ENST00000588885 LAMA3Q16787 3333 aa13.52□□□□□ -0.25
RFX1-204ENST00000588885 A0A1W2PPC1 479 aa13.51□□□□□ -0.25
RFX1-204ENST00000588885 PTPDC1A2A3K4 754 aa13.51□□□□□ -0.25
RFX1-204ENST00000588885 DHX16O60231 1041 aaKnown RBP13.51□□□□□ -0.25
RFX1-204ENST00000588885 CALML3P27482 149 aa13.51□□□□□ -0.25
RFX1-204ENST00000588885 MAGEA10P43363 369 aaPredicted RBP13.51□□□□□ -0.25
RFX1-204ENST00000588885 RTP1P59025 263 aa13.51□□□□□ -0.25
RFX1-204ENST00000588885 TRDNQ13061 729 aa13.51□□□□□ -0.25
RFX1-204ENST00000588885 USH1GQ495M9 461 aa13.51□□□□□ -0.25
RFX1-204ENST00000588885 IFIT1BQ5T764 474 aaKnown RBP13.51□□□□□ -0.25
RFX1-204ENST00000588885 POTEGQ6S5H5 508 aa13.51□□□□□ -0.25
RFX1-204ENST00000588885 SLC39A5Q6ZMH5 540 aa13.51□□□□□ -0.25
RFX1-204ENST00000588885 CHST3Q7LGC8 479 aa13.51□□□□□ -0.25
RFX1-204ENST00000588885 RNF180Q86T96 592 aa13.51□□□□□ -0.25
RFX1-204ENST00000588885 UBE2OQ9C0C9 1292 aaKnown RBP13.51□□□□□ -0.25
RFX1-204ENST00000588885 SZT2Q5T011 3432 aa13.51□□□□□ -0.25
RFX1-204ENST00000588885 ASTN1O14525 1302 aa13.5□□□□□ -0.25
RFX1-204ENST00000588885 MYADML2A6NDP7 307 aa13.5□□□□□ -0.25
RFX1-204ENST00000588885 ADCY6O43306 1168 aa13.5□□□□□ -0.25
RFX1-204ENST00000588885 CDC45O75419 566 aa13.5□□□□□ -0.25
RFX1-204ENST00000588885 PARP1P09874 1014 aaKnown RBP13.5□□□□□ -0.25
RFX1-204ENST00000588885 PTGS1P23219 599 aa13.5□□□□□ -0.25
RFX1-204ENST00000588885 MDM2Q00987 491 aaPredicted RBP13.5□□□□□ -0.25
RFX1-204ENST00000588885 TRIM60Q495X7 471 aa13.5□□□□□ -0.25
RFX1-204ENST00000588885 GPATCH4Q5T3I0 446 aaKnown RBP13.5□□□□□ -0.25
RFX1-204ENST00000588885 KIAA1211Q6ZU35 1233 aa13.5□□□□□ -0.25
RFX1-204ENST00000588885 ADGRF4Q8IZF3 695 aa13.5□□□□□ -0.25
RFX1-204ENST00000588885 CLEC4DQ8WXI8 215 aa13.5□□□□□ -0.25
RFX1-204ENST00000588885 PRO3102Q9H379 93 aa13.5□□□□□ -0.25
RFX1-204ENST00000588885 ABHD16BQ9H3Z7 469 aa13.5□□□□□ -0.25
RFX1-204ENST00000588885 SENP2Q9HC62 589 aa13.5□□□□□ -0.25
RFX1-204ENST00000588885 PRKAG2Q9UGJ0 569 aa13.5□□□□□ -0.25
RFX1-204ENST00000588885 MCM3APO60318 1980 aa13.49□□□□□ -0.25
RFX1-204ENST00000588885 SYNRGQ9UMZ2 1314 aa13.49□□□□□ -0.25
RFX1-204ENST00000588885 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.49□□□□□ -0.25
RFX1-204ENST00000588885 ASB14A6NK59 587 aa13.49□□□□□ -0.25
RFX1-204ENST00000588885 E7EWF7 191 aa13.49□□□□□ -0.25
RFX1-204ENST00000588885 IFIT3O14879 490 aaKnown RBP13.49□□□□□ -0.25
RFX1-204ENST00000588885 C6orf222P0C671 652 aaPredicted RBP13.49□□□□□ -0.25
RFX1-204ENST00000588885 MKRN4PQ13434 485 aaPredicted RBP13.49□□□□□ -0.25
RFX1-204ENST00000588885 SEC23AQ15436 765 aa13.49□□□□□ -0.25
RFX1-204ENST00000588885 KCNA10Q16322 511 aa13.49□□□□□ -0.25
RFX1-204ENST00000588885 CDC37Q16543 378 aaPredicted RBP13.49□□□□□ -0.25
RFX1-204ENST00000588885 SLC30A10Q6XR72 485 aa13.49□□□□□ -0.25
RFX1-204ENST00000588885 STOX1Q6ZVD7 989 aa13.49□□□□□ -0.25
RFX1-204ENST00000588885 STAG2Q8N3U4 1231 aa13.49□□□□□ -0.25
RFX1-204ENST00000588885 MAP4K1Q92918 833 aa13.49□□□□□ -0.25
RFX1-204ENST00000588885 GDF15Q99988 308 aa13.49□□□□□ -0.25
RFX1-204ENST00000588885 LBHD1Q9BQE6 289 aaPredicted RBP13.49□□□□□ -0.25
RFX1-204ENST00000588885 KATNBL1Q9H079 304 aa13.49□□□□□ -0.25
RFX1-204ENST00000588885 PRDM5Q9NQX1 630 aaPredicted RBP13.49□□□□□ -0.25
RFX1-204ENST00000588885 PDGFCQ9NRA1 345 aa13.49□□□□□ -0.25
RFX1-204ENST00000588885 PHF24Q9UPV7 400 aa13.49□□□□□ -0.25
RFX1-204ENST00000588885 RBM8AQ9Y5S9 174 aaKnown RBP13.49□□□□□ -0.25
RFX1-204ENST00000588885 LAMA2P24043 3122 aaKnown RBP13.48□□□□□ -0.25
RFX1-204ENST00000588885 ADAMTS4O75173 837 aa13.48□□□□□ -0.25
RFX1-204ENST00000588885 DUSP11O75319 330 aaKnown RBP13.48□□□□□ -0.25
RFX1-204ENST00000588885 NT5C2P49902 561 aa13.48□□□□□ -0.25
RFX1-204ENST00000588885 TNFAIP2Q03169 654 aa13.48□□□□□ -0.25
RFX1-204ENST00000588885 ASPRV1Q53RT3 343 aa13.48□□□□□ -0.25
RFX1-204ENST00000588885 TMEM63BQ5T3F8 832 aa13.48□□□□□ -0.25
RFX1-204ENST00000588885 RNF207Q6ZRF8 634 aa13.48□□□□□ -0.25
RFX1-204ENST00000588885 RALYLQ86SE5 291 aaKnown RBP13.48□□□□□ -0.25
RFX1-204ENST00000588885 FBXO16Q8IX29 292 aaPredicted RBP13.48□□□□□ -0.25
RFX1-204ENST00000588885 TBC1D5Q92609 795 aa13.48□□□□□ -0.25
RFX1-204ENST00000588885 VTI1AQ96AJ9 217 aa13.48□□□□□ -0.25
RFX1-204ENST00000588885 ESYT1Q9BSJ8 1104 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms