RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 ADCYAP1R1P41586 468 aa26.87■■□□□ 1.89
VAPA-205ENST00000578314 IFIT1BQ5T764 474 aaKnown RBP26.87■■□□□ 1.89
VAPA-205ENST00000578314 SLC39A5Q6ZMH5 540 aa26.87■■□□□ 1.89
VAPA-205ENST00000578314 CLEC4DQ8WXI8 215 aa26.87■■□□□ 1.89
VAPA-205ENST00000578314 TAF6LQ9Y6J9 622 aa26.87■■□□□ 1.89
VAPA-205ENST00000578314 ASTN1O14525 1302 aa26.87■■□□□ 1.89
VAPA-205ENST00000578314 E7EWF7 191 aa26.86■■□□□ 1.89
VAPA-205ENST00000578314 NFIBO00712 420 aa26.86■■□□□ 1.89
VAPA-205ENST00000578314 BMP8BP34820 402 aa26.86■■□□□ 1.89
VAPA-205ENST00000578314 BAATQ14032 418 aaPredicted RBP26.86■■□□□ 1.89
VAPA-205ENST00000578314 CCDC144BQ3MJ40 725 aa26.86■■□□□ 1.89
VAPA-205ENST00000578314 BMP2KLQ5H9B9 411 aa26.86■■□□□ 1.89
VAPA-205ENST00000578314 LENG1Q96BZ8 264 aaPredicted RBP26.86■■□□□ 1.89
VAPA-205ENST00000578314 CPVLQ9H3G5 476 aa26.86■■□□□ 1.89
VAPA-205ENST00000578314 PARP1P09874 1014 aaKnown RBP26.85■■□□□ 1.89
VAPA-205ENST00000578314 SNX17Q15036 470 aa26.85■■□□□ 1.89
VAPA-205ENST00000578314 C1orf53Q5VUE5 145 aa26.85■■□□□ 1.89
VAPA-205ENST00000578314 ADGRF4Q8IZF3 695 aa26.85■■□□□ 1.89
VAPA-205ENST00000578314 KLHDC9Q8NEP7 349 aa26.85■■□□□ 1.89
VAPA-205ENST00000578314 NCOA7Q8NI08 942 aa26.85■■□□□ 1.89
VAPA-205ENST00000578314 MORC4Q8TE76 937 aa26.85■■□□□ 1.89
VAPA-205ENST00000578314 TSEN34Q9BSV6 310 aaKnown RBP26.85■■□□□ 1.89
VAPA-205ENST00000578314 RBM8AQ9Y5S9 174 aaKnown RBP26.85■■□□□ 1.89
VAPA-205ENST00000578314 SMCHD1A6NHR9 2005 aa26.85■■□□□ 1.89
VAPA-205ENST00000578314 RTP1P59025 263 aa26.84■■□□□ 1.89
VAPA-205ENST00000578314 KIAA1211Q6ZU35 1233 aa26.84■■□□□ 1.89
VAPA-205ENST00000578314 STOX1Q6ZVD7 989 aa26.84■■□□□ 1.89
VAPA-205ENST00000578314 SKAP1Q86WV1 359 aa26.84■■□□□ 1.89
VAPA-205ENST00000578314 ESYT1Q9BSJ8 1104 aa26.84■■□□□ 1.89
VAPA-205ENST00000578314 LSG1Q9H089 658 aaKnown RBP26.84■■□□□ 1.89
VAPA-205ENST00000578314 SYNRGQ9UMZ2 1314 aa26.84■■□□□ 1.89
VAPA-205ENST00000578314 ADCY6O43306 1168 aa26.83■■□□□ 1.89
VAPA-205ENST00000578314 MAGEA10P43363 369 aaPredicted RBP26.83■■□□□ 1.89
VAPA-205ENST00000578314 RALYLQ86SE5 291 aaKnown RBP26.83■■□□□ 1.89
VAPA-205ENST00000578314 RGS22Q8NE09 1264 aa26.83■■□□□ 1.89
VAPA-205ENST00000578314 FERMT2Q96AC1 680 aa26.83■■□□□ 1.89
VAPA-205ENST00000578314 PURBQ96QR8 312 aaKnown RBP26.83■■□□□ 1.89
VAPA-205ENST00000578314 ADD3Q9UEY8 706 aaKnown RBP26.83■■□□□ 1.89
VAPA-205ENST00000578314 LOC102724159A0A0B4J2E5 919 aa26.82■■□□□ 1.88
VAPA-205ENST00000578314 CST5P28325 142 aaPredicted RBP26.82■■□□□ 1.88
VAPA-205ENST00000578314 PWP2Q15269 919 aaKnown RBP26.82■■□□□ 1.88
VAPA-205ENST00000578314 CDC37Q16543 378 aaPredicted RBP26.82■■□□□ 1.88
VAPA-205ENST00000578314 CCSAPQ6IQ19 270 aaPredicted RBP26.82■■□□□ 1.88
VAPA-205ENST00000578314 MAF1Q9H063 256 aa26.82■■□□□ 1.88
VAPA-205ENST00000578314 UPF3AQ9H1J1 476 aaKnown RBP26.82■■□□□ 1.88
VAPA-205ENST00000578314 LAMA3Q16787 3333 aa26.82■■□□□ 1.88
VAPA-205ENST00000578314 PTPDC1A2A3K4 754 aa26.81■■□□□ 1.88
VAPA-205ENST00000578314 IFIT3O14879 490 aaKnown RBP26.81■■□□□ 1.88
VAPA-205ENST00000578314 GJA9P57773 515 aa26.81■■□□□ 1.88
VAPA-205ENST00000578314 NKX3-2P78367 333 aa26.81■■□□□ 1.88
VAPA-205ENST00000578314 RNF207Q6ZRF8 634 aa26.81■■□□□ 1.88
VAPA-205ENST00000578314 JMJD4Q9H9V9 463 aa26.81■■□□□ 1.88
VAPA-205ENST00000578314 ERICH2A1L162 156 aa26.8■■□□□ 1.88
VAPA-205ENST00000578314 MOXD2PA6NHM9 499 aa26.8■■□□□ 1.88
VAPA-205ENST00000578314 ACLYP53396 1101 aa26.8■■□□□ 1.88
VAPA-205ENST00000578314 STAG2Q8N3U4 1231 aa26.8■■□□□ 1.88
VAPA-205ENST00000578314 SPC25Q9HBM1 224 aa26.8■■□□□ 1.88
VAPA-205ENST00000578314 MAD2L2Q9UI95 211 aa26.8■■□□□ 1.88
VAPA-205ENST00000578314 ATP11BQ9Y2G3 1177 aa26.8■■□□□ 1.88
VAPA-205ENST00000578314 DDX49Q9Y6V7 483 aaKnown RBP26.8■■□□□ 1.88
VAPA-205ENST00000578314 A0A1W2PQ45 241 aaPredicted RBP26.79■■□□□ 1.88
VAPA-205ENST00000578314 A0A1W2PQY0 241 aa26.79■■□□□ 1.88
VAPA-205ENST00000578314 PALM3A6NDB9 673 aaPredicted RBP26.79■■□□□ 1.88
VAPA-205ENST00000578314 CALML3P27482 149 aa26.79■■□□□ 1.88
VAPA-205ENST00000578314 ALDH5A1P51649 535 aaPredicted RBP26.79■■□□□ 1.88
VAPA-205ENST00000578314 RPS6P62753 249 aaKnown RBP26.79■■□□□ 1.88
VAPA-205ENST00000578314 TNFAIP2Q03169 654 aa26.79■■□□□ 1.88
VAPA-205ENST00000578314 SART3Q15020 963 aaKnown RBP26.79■■□□□ 1.88
VAPA-205ENST00000578314 KCNA10Q16322 511 aa26.79■■□□□ 1.88
VAPA-205ENST00000578314 USH1GQ495M9 461 aa26.79■■□□□ 1.88
VAPA-205ENST00000578314 TAPT1Q6NXT6 567 aa26.79■■□□□ 1.88
VAPA-205ENST00000578314 SLC30A10Q6XR72 485 aa26.79■■□□□ 1.88
VAPA-205ENST00000578314 MB21D2Q8IYB1 491 aaPredicted RBP26.79■■□□□ 1.88
VAPA-205ENST00000578314 VTA1Q9NP79 307 aa26.79■■□□□ 1.88
VAPA-205ENST00000578314 GNEQ9Y223 722 aaKnown RBP26.79■■□□□ 1.88
VAPA-205ENST00000578314 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.78■■□□□ 1.88
VAPA-205ENST00000578314 MYADML2A6NDP7 307 aa26.78■■□□□ 1.88
VAPA-205ENST00000578314 KLRF2D3W0D1 207 aa26.78■■□□□ 1.88
VAPA-205ENST00000578314 SOX1O00570 391 aaPredicted RBP26.78■■□□□ 1.88
VAPA-205ENST00000578314 ANTXR2P58335 489 aa26.78■■□□□ 1.88
VAPA-205ENST00000578314 WTAPQ15007 396 aa26.78■■□□□ 1.88
VAPA-205ENST00000578314 QRICH1Q2TAL8 776 aa26.78■■□□□ 1.88
VAPA-205ENST00000578314 TRIM60Q495X7 471 aa26.78■■□□□ 1.88
VAPA-205ENST00000578314 IQSEC1Q6DN90 963 aa26.78■■□□□ 1.88
VAPA-205ENST00000578314 CHST3Q7LGC8 479 aa26.78■■□□□ 1.88
VAPA-205ENST00000578314 PCSK9Q8NBP7 692 aaKnown RBP26.78■■□□□ 1.88
VAPA-205ENST00000578314 IGDCC4Q8TDY8 1250 aa26.78■■□□□ 1.88
VAPA-205ENST00000578314 SENP2Q9HC62 589 aa26.78■■□□□ 1.88
VAPA-205ENST00000578314 VAT1LQ9HCJ6 419 aa26.78■■□□□ 1.88
VAPA-205ENST00000578314 ABCB11O95342 1321 aa26.78■■□□□ 1.88
VAPA-205ENST00000578314 CTAGE5O15320 804 aa26.77■■□□□ 1.88
VAPA-205ENST00000578314 C6orf222P0C671 652 aaPredicted RBP26.77■■□□□ 1.88
VAPA-205ENST00000578314 NECTIN1Q15223 517 aa26.77■■□□□ 1.88
VAPA-205ENST00000578314 DNERQ8NFT8 737 aa26.77■■□□□ 1.88
VAPA-205ENST00000578314 NUP133Q8WUM0 1156 aa26.77■■□□□ 1.88
VAPA-205ENST00000578314 MTMR8Q96EF0 704 aa26.77■■□□□ 1.88
VAPA-205ENST00000578314 MTA3Q9BTC8 594 aa26.77■■□□□ 1.88
VAPA-205ENST00000578314 PDGFCQ9NRA1 345 aa26.77■■□□□ 1.88
VAPA-205ENST00000578314 DHX16O60231 1041 aaKnown RBP26.76■■□□□ 1.87
VAPA-205ENST00000578314 IRX5P78411 483 aaPredicted RBP26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms