RNA–Protein interactions for RNA: ENST00000559889.5

IDH3A-217, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,461 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-217ENST00000559889 FRMPD2Q68DX3 1309 aaPredicted RBP10.64□□□□□ -0.71
IDH3A-217ENST00000559889 SOX1O00570 391 aaPredicted RBP10.64□□□□□ -0.71
IDH3A-217ENST00000559889 ADAMTS4O75173 837 aa10.64□□□□□ -0.71
IDH3A-217ENST00000559889 MYCNP04198 464 aaPredicted RBP10.64□□□□□ -0.71
IDH3A-217ENST00000559889 CCDC96Q2M329 555 aa10.64□□□□□ -0.71
IDH3A-217ENST00000559889 RUFY2Q8WXA3 655 aa10.64□□□□□ -0.71
IDH3A-217ENST00000559889 ESR2Q92731 530 aa10.64□□□□□ -0.71
IDH3A-217ENST00000559889 TRERF1Q96PN7 1200 aa10.64□□□□□ -0.71
IDH3A-217ENST00000559889 ZKSCAN3Q9BRR0 538 aa10.64□□□□□ -0.71
IDH3A-217ENST00000559889 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.64□□□□□ -0.71
IDH3A-217ENST00000559889 SMCHD1A6NHR9 2005 aa10.64□□□□□ -0.71
IDH3A-217ENST00000559889 SOWAHBA6NEL2 793 aa10.63□□□□□ -0.71
IDH3A-217ENST00000559889 ICAM1P05362 532 aa10.63□□□□□ -0.71
IDH3A-217ENST00000559889 ALAS1P13196 640 aa10.63□□□□□ -0.71
IDH3A-217ENST00000559889 RTP1P59025 263 aa10.63□□□□□ -0.71
IDH3A-217ENST00000559889 ACVR2BQ13705 512 aa10.63□□□□□ -0.71
IDH3A-217ENST00000559889 TKFCQ3LXA3 575 aa10.63□□□□□ -0.71
IDH3A-217ENST00000559889 ARMCX2Q7L311 632 aa10.63□□□□□ -0.71
IDH3A-217ENST00000559889 CCDC144CPQ8IYA2 1237 aa10.63□□□□□ -0.71
IDH3A-217ENST00000559889 FERMT2Q96AC1 680 aa10.63□□□□□ -0.71
IDH3A-217ENST00000559889 PHF24Q9UPV7 400 aa10.63□□□□□ -0.71
IDH3A-217ENST00000559889 SYNRGQ9UMZ2 1314 aa10.63□□□□□ -0.71
IDH3A-217ENST00000559889 MCM4P33991 863 aa10.63□□□□□ -0.71
IDH3A-217ENST00000559889 DDIT3P35638 169 aa10.63□□□□□ -0.71
IDH3A-217ENST00000559889 ZNF543Q08ER8 600 aa10.63□□□□□ -0.71
IDH3A-217ENST00000559889 SYDE2Q5VT97 1194 aa10.63□□□□□ -0.71
IDH3A-217ENST00000559889 C1orf53Q5VUE5 145 aa10.63□□□□□ -0.71
IDH3A-217ENST00000559889 CCSAPQ6IQ19 270 aaPredicted RBP10.63□□□□□ -0.71
IDH3A-217ENST00000559889 DGKHQ86XP1 1220 aa10.63□□□□□ -0.71
IDH3A-217ENST00000559889 TNPO1Q92973 898 aaKnown RBP10.63□□□□□ -0.71
IDH3A-217ENST00000559889 ABHD16BQ9H3Z7 469 aa10.63□□□□□ -0.71
IDH3A-217ENST00000559889 GPCPD1Q9NPB8 672 aa10.63□□□□□ -0.71
IDH3A-217ENST00000559889 CYP39A1Q9NYL5 469 aa10.63□□□□□ -0.71
IDH3A-217ENST00000559889 ZHX1Q9UKY1 873 aaPredicted RBP10.63□□□□□ -0.71
IDH3A-217ENST00000559889 FAM184BQ9ULE4 1060 aa10.63□□□□□ -0.71
IDH3A-217ENST00000559889 DDX49Q9Y6V7 483 aaKnown RBP10.63□□□□□ -0.71
IDH3A-217ENST00000559889 POTEB2H3BUK9 544 aa10.62□□□□□ -0.71
IDH3A-217ENST00000559889 KDM4AO75164 1064 aa10.62□□□□□ -0.71
IDH3A-217ENST00000559889 HSPA4P34932 840 aa10.62□□□□□ -0.71
IDH3A-217ENST00000559889 ANAPC15P60006 121 aa10.62□□□□□ -0.71
IDH3A-217ENST00000559889 IRX5P78411 483 aaPredicted RBP10.62□□□□□ -0.71
IDH3A-217ENST00000559889 RNF180Q86T96 592 aa10.62□□□□□ -0.71
IDH3A-217ENST00000559889 KLHDC9Q8NEP7 349 aa10.62□□□□□ -0.71
IDH3A-217ENST00000559889 ZSWIM5Q9P217 1185 aa10.62□□□□□ -0.71
IDH3A-217ENST00000559889 CCPG1Q9ULG6 757 aa10.62□□□□□ -0.71
IDH3A-217ENST00000559889 CIZ1Q9ULV3 898 aaPredicted RBP10.62□□□□□ -0.71
IDH3A-217ENST00000559889 LAMA4Q16363 1823 aa10.62□□□□□ -0.71
IDH3A-217ENST00000559889 RAD50Q92878 1312 aa10.62□□□□□ -0.71
IDH3A-217ENST00000559889 MYADML2A6NDP7 307 aa10.62□□□□□ -0.71
IDH3A-217ENST00000559889 B4E1Z4 1266 aa10.62□□□□□ -0.71
IDH3A-217ENST00000559889 DUSP11O75319 330 aaKnown RBP10.62□□□□□ -0.71
IDH3A-217ENST00000559889 NT5C2P49902 561 aa10.62□□□□□ -0.71
IDH3A-217ENST00000559889 MDM2Q00987 491 aaPredicted RBP10.62□□□□□ -0.71
IDH3A-217ENST00000559889 CCDC144BQ3MJ40 725 aa10.62□□□□□ -0.71
IDH3A-217ENST00000559889 TRIM60Q495X7 471 aa10.62□□□□□ -0.71
IDH3A-217ENST00000559889 ANKS1AQ92625 1134 aa10.62□□□□□ -0.71
IDH3A-217ENST00000559889 PURBQ96QR8 312 aaKnown RBP10.62□□□□□ -0.71
IDH3A-217ENST00000559889 LSG1Q9H089 658 aaKnown RBP10.62□□□□□ -0.71
IDH3A-217ENST00000559889 ATP11BQ9Y2G3 1177 aa10.62□□□□□ -0.71
IDH3A-217ENST00000559889 A0A1W2PQ45 241 aaPredicted RBP10.61□□□□□ -0.71
IDH3A-217ENST00000559889 A0A1W2PQY0 241 aa10.61□□□□□ -0.71
IDH3A-217ENST00000559889 IMMTQ16891 758 aaKnown RBP10.61□□□□□ -0.71
IDH3A-217ENST00000559889 TDHQ8IZJ6 230 aa10.61□□□□□ -0.71
IDH3A-217ENST00000559889 LRCH3Q96II8 777 aa10.61□□□□□ -0.71
IDH3A-217ENST00000559889 NFIBO00712 420 aa10.61□□□□□ -0.71
IDH3A-217ENST00000559889 CTAGE5O15320 804 aa10.61□□□□□ -0.71
IDH3A-217ENST00000559889 ENAHQ8N8S7 591 aaPredicted RBP10.61□□□□□ -0.71
IDH3A-217ENST00000559889 CLEC4DQ8WXI8 215 aa10.61□□□□□ -0.71
IDH3A-217ENST00000559889 TMX3Q96JJ7 454 aa10.61□□□□□ -0.71
IDH3A-217ENST00000559889 ZSCAN10Q96SZ4 725 aaPredicted RBP10.61□□□□□ -0.71
IDH3A-217ENST00000559889 TSEN34Q9BSV6 310 aaKnown RBP10.61□□□□□ -0.71
IDH3A-217ENST00000559889 UBE2OQ9C0C9 1292 aaKnown RBP10.61□□□□□ -0.71
IDH3A-217ENST00000559889 CTNNA3Q9UI47 895 aa10.61□□□□□ -0.71
IDH3A-217ENST00000559889 GOLGA8HP0CJ92 632 aa10.6□□□□□ -0.71
IDH3A-217ENST00000559889 ACLYP53396 1101 aa10.6□□□□□ -0.71
IDH3A-217ENST00000559889 PTH1RQ03431 593 aa10.6□□□□□ -0.71
IDH3A-217ENST00000559889 KCNA10Q16322 511 aa10.6□□□□□ -0.71
IDH3A-217ENST00000559889 LRIT3Q3SXY7 679 aa10.6□□□□□ -0.71
IDH3A-217ENST00000559889 SH3RF1Q7Z6J0 888 aa10.6□□□□□ -0.71
IDH3A-217ENST00000559889 IQCA1Q86XH1 822 aa10.6□□□□□ -0.71
IDH3A-217ENST00000559889 PNMA1Q8ND90 353 aa10.6□□□□□ -0.71
IDH3A-217ENST00000559889 UPF3AQ9H1J1 476 aaKnown RBP10.6□□□□□ -0.71
IDH3A-217ENST00000559889 CPVLQ9H3G5 476 aa10.6□□□□□ -0.71
IDH3A-217ENST00000559889 PDLIM7Q9NR12 457 aa10.6□□□□□ -0.71
IDH3A-217ENST00000559889 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.6□□□□□ -0.71
IDH3A-217ENST00000559889 TRIM43BA6NCK2 446 aa10.6□□□□□ -0.71
IDH3A-217ENST00000559889 CST5P28325 142 aaPredicted RBP10.6□□□□□ -0.71
IDH3A-217ENST00000559889 GJA9P57773 515 aa10.6□□□□□ -0.71
IDH3A-217ENST00000559889 NKX3-2P78367 333 aa10.6□□□□□ -0.71
IDH3A-217ENST00000559889 TLE2Q04725 743 aa10.6□□□□□ -0.71
IDH3A-217ENST00000559889 GPATCH4Q5T3I0 446 aaKnown RBP10.6□□□□□ -0.71
IDH3A-217ENST00000559889 NSMFQ6X4W1 530 aa10.6□□□□□ -0.71
IDH3A-217ENST00000559889 RASEFQ8IZ41 740 aa10.6□□□□□ -0.71
IDH3A-217ENST00000559889 MORC4Q8TE76 937 aa10.6□□□□□ -0.71
IDH3A-217ENST00000559889 TRIM43Q96BQ3 446 aaPredicted RBP10.6□□□□□ -0.71
IDH3A-217ENST00000559889 GBP4Q96PP9 640 aa10.6□□□□□ -0.71
IDH3A-217ENST00000559889 GZF1Q9H116 711 aaPredicted RBP10.6□□□□□ -0.71
IDH3A-217ENST00000559889 SNX14Q9Y5W7 946 aa10.6□□□□□ -0.71
IDH3A-217ENST00000559889 TNKSO95271 1327 aa10.59□□□□□ -0.71
IDH3A-217ENST00000559889 CDH23Q9H251 3354 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms