RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 PARP1P09874 1014 aaKnown RBP20.98■□□□□ 0.95
CCDC61-201ENST00000536603 ADCYAP1R1P41586 468 aa20.98■□□□□ 0.95
CCDC61-201ENST00000536603 ABRAQ8N0Z2 381 aa20.98■□□□□ 0.95
CCDC61-201ENST00000536603 FERMT2Q96AC1 680 aa20.98■□□□□ 0.95
CCDC61-201ENST00000536603 AGBL1Q96MI9 1066 aa20.98■□□□□ 0.95
CCDC61-201ENST00000536603 GUCD1Q96NT3 240 aa20.98■□□□□ 0.95
CCDC61-201ENST00000536603 MMP19Q99542 508 aa20.98■□□□□ 0.95
CCDC61-201ENST00000536603 UBA5Q9GZZ9 404 aa20.98■□□□□ 0.95
CCDC61-201ENST00000536603 CPVLQ9H3G5 476 aa20.98■□□□□ 0.95
CCDC61-201ENST00000536603 ZNF536O15090 1300 aa20.98■□□□□ 0.95
CCDC61-201ENST00000536603 KCTD2Q14681 263 aa20.97■□□□□ 0.95
CCDC61-201ENST00000536603 TSGA10IPQ3SY00 556 aa20.97■□□□□ 0.95
CCDC61-201ENST00000536603 TRIM60Q495X7 471 aa20.97■□□□□ 0.95
CCDC61-201ENST00000536603 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.97■□□□□ 0.95
CCDC61-201ENST00000536603 NEK1Q96PY6 1258 aa20.97■□□□□ 0.95
CCDC61-201ENST00000536603 RANBP17Q9H2T7 1088 aaKnown RBP20.97■□□□□ 0.95
CCDC61-201ENST00000536603 GPHNQ9NQX3 736 aaPredicted RBP20.97■□□□□ 0.95
CCDC61-201ENST00000536603 HSPA4P34932 840 aa20.96■□□□□ 0.95
CCDC61-201ENST00000536603 SHHQ15465 462 aa20.96■□□□□ 0.95
CCDC61-201ENST00000536603 ADCK5Q3MIX3 580 aa20.96■□□□□ 0.95
CCDC61-201ENST00000536603 ASPRV1Q53RT3 343 aa20.96■□□□□ 0.95
CCDC61-201ENST00000536603 BADQ92934 168 aa20.96■□□□□ 0.95
CCDC61-201ENST00000536603 MAML3Q96JK9 1138 aa20.96■□□□□ 0.95
CCDC61-201ENST00000536603 LY9Q9HBG7 655 aa20.96■□□□□ 0.95
CCDC61-201ENST00000536603 HOMER2Q9NSB8 354 aa20.96■□□□□ 0.95
CCDC61-201ENST00000536603 ZNFX1Q9P2E3 1918 aaKnown RBP20.96■□□□□ 0.95
CCDC61-201ENST00000536603 IGHA2P01877 340 aa20.95■□□□□ 0.94
CCDC61-201ENST00000536603 PGK2P07205 417 aa20.95■□□□□ 0.94
CCDC61-201ENST00000536603 KRT32Q14532 448 aa20.95■□□□□ 0.94
CCDC61-201ENST00000536603 LRRC41Q15345 812 aa20.95■□□□□ 0.94
CCDC61-201ENST00000536603 STAG2Q8N3U4 1231 aa20.95■□□□□ 0.94
CCDC61-201ENST00000536603 CHST13Q8NET6 341 aa20.95■□□□□ 0.94
CCDC61-201ENST00000536603 TMEM87BQ96K49 555 aa20.95■□□□□ 0.94
CCDC61-201ENST00000536603 MTA3Q9BTC8 594 aa20.95■□□□□ 0.94
CCDC61-201ENST00000536603 LRRC2Q9BYS8 371 aa20.95■□□□□ 0.94
CCDC61-201ENST00000536603 FBXO40Q9UH90 709 aa20.95■□□□□ 0.94
CCDC61-201ENST00000536603 SH2B2O14492 632 aaPredicted RBP20.94■□□□□ 0.94
CCDC61-201ENST00000536603 ICAM1P05362 532 aa20.94■□□□□ 0.94
CCDC61-201ENST00000536603 ALAS1P13196 640 aa20.94■□□□□ 0.94
CCDC61-201ENST00000536603 CATIPQ7Z7H3 387 aa20.94■□□□□ 0.94
CCDC61-201ENST00000536603 KCNB2Q92953 911 aa20.94■□□□□ 0.94
CCDC61-201ENST00000536603 DDX11Q96FC9 970 aa20.94■□□□□ 0.94
CCDC61-201ENST00000536603 TRERF1Q96PN7 1200 aa20.94■□□□□ 0.94
CCDC61-201ENST00000536603 COL25A1Q9BXS0 654 aaPredicted RBP20.94■□□□□ 0.94
CCDC61-201ENST00000536603 MAD2L2Q9UI95 211 aa20.94■□□□□ 0.94
CCDC61-201ENST00000536603 CCPG1Q9ULG6 757 aa20.94■□□□□ 0.94
CCDC61-201ENST00000536603 RARBP10826 455 aa20.93■□□□□ 0.94
CCDC61-201ENST00000536603 TAL1P17542 331 aaPredicted RBP20.93■□□□□ 0.94
CCDC61-201ENST00000536603 TROAPQ12815 778 aa20.93■□□□□ 0.94
CCDC61-201ENST00000536603 TKFCQ3LXA3 575 aa20.93■□□□□ 0.94
CCDC61-201ENST00000536603 C9orf50Q5SZB4 431 aa20.93■□□□□ 0.94
CCDC61-201ENST00000536603 NFXL1Q6ZNB6 911 aa20.93■□□□□ 0.94
CCDC61-201ENST00000536603 ADGRF4Q8IZF3 695 aa20.93■□□□□ 0.94
CCDC61-201ENST00000536603 ANKRD35Q8N283 1001 aa20.93■□□□□ 0.94
CCDC61-201ENST00000536603 TMTC2Q8N394 836 aa20.93■□□□□ 0.94
CCDC61-201ENST00000536603 NUP133Q8WUM0 1156 aa20.93■□□□□ 0.94
CCDC61-201ENST00000536603 USP26Q9BXU7 913 aa20.93■□□□□ 0.94
CCDC61-201ENST00000536603 ACAD9Q9H845 621 aa20.93■□□□□ 0.94
CCDC61-201ENST00000536603 VAT1LQ9HCJ6 419 aa20.93■□□□□ 0.94
CCDC61-201ENST00000536603 XPNPEP3Q9NQH7 507 aa20.93■□□□□ 0.94
CCDC61-201ENST00000536603 RNF146Q9NTX7 359 aa20.93■□□□□ 0.94
CCDC61-201ENST00000536603 SNX14Q9Y5W7 946 aa20.93■□□□□ 0.94
CCDC61-201ENST00000536603 CCDC69A6NI79 296 aa20.92■□□□□ 0.94
CCDC61-201ENST00000536603 KLRF2D3W0D1 207 aa20.92■□□□□ 0.94
CCDC61-201ENST00000536603 EPB41L2O43491 1005 aaKnown RBP20.92■□□□□ 0.94
CCDC61-201ENST00000536603 DHX16O60231 1041 aaKnown RBP20.92■□□□□ 0.94
CCDC61-201ENST00000536603 LIFRP42702 1097 aa20.92■□□□□ 0.94
CCDC61-201ENST00000536603 EXOSC10Q01780 885 aaKnown RBP20.92■□□□□ 0.94
CCDC61-201ENST00000536603 GRM4Q14833 912 aa20.92■□□□□ 0.94
CCDC61-201ENST00000536603 ZNF792Q3KQV3 632 aa20.92■□□□□ 0.94
CCDC61-201ENST00000536603 C8orf34Q49A92 452 aa20.92■□□□□ 0.94
CCDC61-201ENST00000536603 DHX32Q7L7V1 743 aaKnown RBP20.92■□□□□ 0.94
CCDC61-201ENST00000536603 ZNF654Q8IZM8 581 aa20.92■□□□□ 0.94
CCDC61-201ENST00000536603 TCEANC2Q96MN5 208 aa20.92■□□□□ 0.94
CCDC61-201ENST00000536603 PDLIM7Q9NR12 457 aa20.92■□□□□ 0.94
CCDC61-201ENST00000536603 A0A0C4DFX4 3053 aa20.92■□□□□ 0.94
CCDC61-201ENST00000536603 PALM3A6NDB9 673 aaPredicted RBP20.91■□□□□ 0.94
CCDC61-201ENST00000536603 SNX17Q15036 470 aa20.91■□□□□ 0.94
CCDC61-201ENST00000536603 MUM1L1Q5H9M0 696 aa20.91■□□□□ 0.94
CCDC61-201ENST00000536603 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.91■□□□□ 0.94
CCDC61-201ENST00000536603 SH3RF1Q7Z6J0 888 aa20.91■□□□□ 0.94
CCDC61-201ENST00000536603 RNF180Q86T96 592 aa20.91■□□□□ 0.94
CCDC61-201ENST00000536603 JAKMIP1Q96N16 626 aaKnown RBP20.91■□□□□ 0.94
CCDC61-201ENST00000536603 CDX2Q99626 313 aaPredicted RBP20.91■□□□□ 0.94
CCDC61-201ENST00000536603 MYL10Q9BUA6 226 aa20.91■□□□□ 0.94
CCDC61-201ENST00000536603 PLXNA1Q9UIW2 1896 aa20.91■□□□□ 0.94
CCDC61-201ENST00000536603 TRIM43BA6NCK2 446 aa20.9■□□□□ 0.94
CCDC61-201ENST00000536603 HMGB1P09429 215 aaKnown RBP20.9■□□□□ 0.94
CCDC61-201ENST00000536603 TLE2Q04725 743 aa20.9■□□□□ 0.94
CCDC61-201ENST00000536603 CDC37Q16543 378 aaPredicted RBP20.9■□□□□ 0.94
CCDC61-201ENST00000536603 TRIM43Q96BQ3 446 aaPredicted RBP20.9■□□□□ 0.94
CCDC61-201ENST00000536603 SEMA6BQ9H3T3 888 aa20.9■□□□□ 0.94
CCDC61-201ENST00000536603 JMJD4Q9H9V9 463 aa20.9■□□□□ 0.94
CCDC61-201ENST00000536603 NRBP1Q9UHY1 535 aa20.9■□□□□ 0.94
CCDC61-201ENST00000536603 DIS3Q9Y2L1 958 aaKnown RBP20.9■□□□□ 0.94
CCDC61-201ENST00000536603 SMCHD1A6NHR9 2005 aa20.89■□□□□ 0.93
CCDC61-201ENST00000536603 WDR19Q8NEZ3 1342 aa20.89■□□□□ 0.93
CCDC61-201ENST00000536603 DNAJC25-GNG10A0A024R161 153 aa20.89■□□□□ 0.93
CCDC61-201ENST00000536603 DDAH1O94760 285 aa20.89■□□□□ 0.93
CCDC61-201ENST00000536603 PGK1P00558 417 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms