RNA–Protein interactions for RNA: ENST00000503682.5

COPS4-202, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5 BASIC

Gene COPS4, Length 1,702 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-202ENST00000503682 ARRDC4Q8NCT1 418 aa11.97□□□□□ -0.49
COPS4-202ENST00000503682 PNMA1Q8ND90 353 aa11.97□□□□□ -0.49
COPS4-202ENST00000503682 ZSCAN10Q96SZ4 725 aaPredicted RBP11.97□□□□□ -0.49
COPS4-202ENST00000503682 CTNNA3Q9UI47 895 aa11.97□□□□□ -0.49
COPS4-202ENST00000503682 CNPY2Q9Y2B0 182 aa11.97□□□□□ -0.49
COPS4-202ENST00000503682 LAMA2P24043 3122 aaKnown RBP11.96□□□□□ -0.49
COPS4-202ENST00000503682 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.96□□□□□ -0.49
COPS4-202ENST00000503682 KBTBD13C9JR72 458 aa11.96□□□□□ -0.49
COPS4-202ENST00000503682 ICAM1P05362 532 aa11.96□□□□□ -0.49
COPS4-202ENST00000503682 SNHG28P0DPA3 235 aa11.96□□□□□ -0.49
COPS4-202ENST00000503682 AKR1A1P14550 325 aa11.96□□□□□ -0.49
COPS4-202ENST00000503682 MDM2Q00987 491 aaPredicted RBP11.96□□□□□ -0.49
COPS4-202ENST00000503682 ACVR2BQ13705 512 aa11.96□□□□□ -0.49
COPS4-202ENST00000503682 TMEM63BQ5T3F8 832 aa11.96□□□□□ -0.49
COPS4-202ENST00000503682 CHST3Q7LGC8 479 aa11.96□□□□□ -0.49
COPS4-202ENST00000503682 ATP11BQ9Y2G3 1177 aa11.96□□□□□ -0.49
COPS4-202ENST00000503682 SGSM2O43147 1006 aa11.95□□□□□ -0.5
COPS4-202ENST00000503682 MAGEA10P43363 369 aaPredicted RBP11.95□□□□□ -0.5
COPS4-202ENST00000503682 RTP1P59025 263 aa11.95□□□□□ -0.5
COPS4-202ENST00000503682 BAATQ14032 418 aaPredicted RBP11.95□□□□□ -0.5
COPS4-202ENST00000503682 CCDC144BQ3MJ40 725 aa11.95□□□□□ -0.5
COPS4-202ENST00000503682 USH1GQ495M9 461 aa11.95□□□□□ -0.5
COPS4-202ENST00000503682 SLC39A5Q6ZMH5 540 aa11.95□□□□□ -0.5
COPS4-202ENST00000503682 STOX1Q6ZVD7 989 aa11.95□□□□□ -0.5
COPS4-202ENST00000503682 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.95□□□□□ -0.5
COPS4-202ENST00000503682 DGKHQ86XP1 1220 aa11.95□□□□□ -0.5
COPS4-202ENST00000503682 RUFY2Q8WXA3 655 aa11.95□□□□□ -0.5
COPS4-202ENST00000503682 KRT23Q9C075 422 aa11.95□□□□□ -0.5
COPS4-202ENST00000503682 KATNBL1Q9H079 304 aa11.95□□□□□ -0.5
COPS4-202ENST00000503682 KAT14Q9H8E8 782 aa11.95□□□□□ -0.5
COPS4-202ENST00000503682 SENP2Q9HC62 589 aa11.95□□□□□ -0.5
COPS4-202ENST00000503682 VAT1LQ9HCJ6 419 aa11.95□□□□□ -0.5
COPS4-202ENST00000503682 CYP39A1Q9NYL5 469 aa11.95□□□□□ -0.5
COPS4-202ENST00000503682 RAD50Q92878 1312 aa11.95□□□□□ -0.5
COPS4-202ENST00000503682 SYNGAP1Q96PV0 1343 aa11.95□□□□□ -0.5
COPS4-202ENST00000503682 SYNRGQ9UMZ2 1314 aa11.95□□□□□ -0.5
COPS4-202ENST00000503682 ADAMTS4O75173 837 aa11.94□□□□□ -0.5
COPS4-202ENST00000503682 COL9A3Q14050 684 aaPredicted RBP11.94□□□□□ -0.5
COPS4-202ENST00000503682 TKFCQ3LXA3 575 aa11.94□□□□□ -0.5
COPS4-202ENST00000503682 TRIM60Q495X7 471 aa11.94□□□□□ -0.5
COPS4-202ENST00000503682 SLC30A10Q6XR72 485 aa11.94□□□□□ -0.5
COPS4-202ENST00000503682 ZNF467Q7Z7K2 595 aaPredicted RBP11.94□□□□□ -0.5
COPS4-202ENST00000503682 STAG2Q8N3U4 1231 aa11.94□□□□□ -0.5
COPS4-202ENST00000503682 CLEC4DQ8WXI8 215 aa11.94□□□□□ -0.5
COPS4-202ENST00000503682 GDF15Q99988 308 aa11.94□□□□□ -0.5
COPS4-202ENST00000503682 PDGFCQ9NRA1 345 aa11.94□□□□□ -0.5
COPS4-202ENST00000503682 NRBP1Q9UHY1 535 aa11.94□□□□□ -0.5
COPS4-202ENST00000503682 FAM184BQ9ULE4 1060 aa11.94□□□□□ -0.5
COPS4-202ENST00000503682 LTBP2Q14767 1821 aa11.94□□□□□ -0.5
COPS4-202ENST00000503682 PTPDC1A2A3K4 754 aa11.94□□□□□ -0.5
COPS4-202ENST00000503682 CALML3P27482 149 aa11.94□□□□□ -0.5
COPS4-202ENST00000503682 NUBP1P53384 320 aa11.94□□□□□ -0.5
COPS4-202ENST00000503682 SEC23AQ15436 765 aa11.94□□□□□ -0.5
COPS4-202ENST00000503682 FBXO16Q8IX29 292 aaPredicted RBP11.94□□□□□ -0.5
COPS4-202ENST00000503682 MSL3Q8N5Y2 521 aaKnown RBP11.94□□□□□ -0.5
COPS4-202ENST00000503682 TBC1D5Q92609 795 aa11.94□□□□□ -0.5
COPS4-202ENST00000503682 UBAC1Q9BSL1 405 aa11.94□□□□□ -0.5
COPS4-202ENST00000503682 ABHD16BQ9H3Z7 469 aa11.94□□□□□ -0.5
COPS4-202ENST00000503682 E7EWF7 191 aa11.93□□□□□ -0.5
COPS4-202ENST00000503682 SOX1O00570 391 aaPredicted RBP11.93□□□□□ -0.5
COPS4-202ENST00000503682 BEX3Q00994 111 aa11.93□□□□□ -0.5
COPS4-202ENST00000503682 IFIT1BQ5T764 474 aaKnown RBP11.93□□□□□ -0.5
COPS4-202ENST00000503682 SH3RF1Q7Z6J0 888 aa11.93□□□□□ -0.5
COPS4-202ENST00000503682 RNF180Q86T96 592 aa11.93□□□□□ -0.5
COPS4-202ENST00000503682 ADGRF4Q8IZF3 695 aa11.93□□□□□ -0.5
COPS4-202ENST00000503682 ANKS1AQ92625 1134 aa11.93□□□□□ -0.5
COPS4-202ENST00000503682 CNNM2Q9H8M5 875 aa11.93□□□□□ -0.5
COPS4-202ENST00000503682 PRDM5Q9NQX1 630 aaPredicted RBP11.93□□□□□ -0.5
COPS4-202ENST00000503682 RBM8AQ9Y5S9 174 aaKnown RBP11.93□□□□□ -0.5
COPS4-202ENST00000503682 A0A1W2PQ45 241 aaPredicted RBP11.92□□□□□ -0.5
COPS4-202ENST00000503682 A0A1W2PQY0 241 aa11.92□□□□□ -0.5
COPS4-202ENST00000503682 DHX16O60231 1041 aaKnown RBP11.92□□□□□ -0.5
COPS4-202ENST00000503682 C6orf222P0C671 652 aaPredicted RBP11.92□□□□□ -0.5
COPS4-202ENST00000503682 KCNA10Q16322 511 aa11.92□□□□□ -0.5
COPS4-202ENST00000503682 CDC37Q16543 378 aaPredicted RBP11.92□□□□□ -0.5
COPS4-202ENST00000503682 NOL8Q76FK4 1167 aaKnown RBP11.92□□□□□ -0.5
COPS4-202ENST00000503682 KLHDC9Q8NEP7 349 aa11.92□□□□□ -0.5
COPS4-202ENST00000503682 MAP4K1Q92918 833 aa11.92□□□□□ -0.5
COPS4-202ENST00000503682 LRCH3Q96II8 777 aa11.92□□□□□ -0.5
COPS4-202ENST00000503682 GPHNQ9NQX3 736 aaPredicted RBP11.92□□□□□ -0.5
COPS4-202ENST00000503682 PHF24Q9UPV7 400 aa11.92□□□□□ -0.5
COPS4-202ENST00000503682 DUSP11O75319 330 aaKnown RBP11.91□□□□□ -0.5
COPS4-202ENST00000503682 PARP1P09874 1014 aaKnown RBP11.91□□□□□ -0.5
COPS4-202ENST00000503682 ACLYP53396 1101 aa11.91□□□□□ -0.5
COPS4-202ENST00000503682 RPS6P62753 249 aaKnown RBP11.91□□□□□ -0.5
COPS4-202ENST00000503682 TRDNQ13061 729 aa11.91□□□□□ -0.5
COPS4-202ENST00000503682 GPATCH4Q5T3I0 446 aaKnown RBP11.91□□□□□ -0.5
COPS4-202ENST00000503682 RNF207Q6ZRF8 634 aa11.91□□□□□ -0.5
COPS4-202ENST00000503682 JMJD4Q9H9V9 463 aa11.91□□□□□ -0.5
COPS4-202ENST00000503682 ASB14A6NK59 587 aa11.91□□□□□ -0.5
COPS4-202ENST00000503682 IFIT3O14879 490 aaKnown RBP11.91□□□□□ -0.5
COPS4-202ENST00000503682 CTAGE5O15320 804 aa11.91□□□□□ -0.5
COPS4-202ENST00000503682 SMPD1P17405 629 aa11.91□□□□□ -0.5
COPS4-202ENST00000503682 ALDH5A1P51649 535 aaPredicted RBP11.91□□□□□ -0.5
COPS4-202ENST00000503682 ANTXR2P58335 489 aa11.91□□□□□ -0.5
COPS4-202ENST00000503682 TNFAIP2Q03169 654 aa11.91□□□□□ -0.5
COPS4-202ENST00000503682 TLE2Q04725 743 aa11.91□□□□□ -0.5
COPS4-202ENST00000503682 SLC35G1Q2M3R5 365 aa11.91□□□□□ -0.5
COPS4-202ENST00000503682 QRICH1Q2TAL8 776 aa11.91□□□□□ -0.5
COPS4-202ENST00000503682 CCDC178Q5BJE1 867 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms