RNA–Protein interactions for RNA: ENST00000470588.1

SMARCD3-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 1,755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-206ENST00000470588 UBASH3AP57075 661 aa19.16■□□□□ 0.66
SMARCD3-206ENST00000470588 LRMPQ12912 555 aa19.16■□□□□ 0.66
SMARCD3-206ENST00000470588 TNFAIP1Q13829 316 aa19.16■□□□□ 0.66
SMARCD3-206ENST00000470588 ABCB5Q2M3G0 1257 aa19.16■□□□□ 0.66
SMARCD3-206ENST00000470588 LETM2Q2VYF4 491 aa19.16■□□□□ 0.66
SMARCD3-206ENST00000470588 JAKMIP3Q5VZ66 844 aa19.16■□□□□ 0.66
SMARCD3-206ENST00000470588 SLFN13Q68D06 897 aa19.16■□□□□ 0.66
SMARCD3-206ENST00000470588 TBCKQ8TEA7 893 aa19.16■□□□□ 0.66
SMARCD3-206ENST00000470588 ZBED3Q96IU2 234 aaPredicted RBP19.16■□□□□ 0.66
SMARCD3-206ENST00000470588 SLURP2P0DP57 97 aa19.15■□□□□ 0.66
SMARCD3-206ENST00000470588 MRPL12P52815 198 aaKnown RBP19.15■□□□□ 0.66
SMARCD3-206ENST00000470588 RRAGBQ5VZM2 374 aa19.15■□□□□ 0.66
SMARCD3-206ENST00000470588 FILIP1Q7Z7B0 1213 aa19.15■□□□□ 0.66
SMARCD3-206ENST00000470588 GLT8D2Q9H1C3 349 aa19.15■□□□□ 0.66
SMARCD3-206ENST00000470588 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.15■□□□□ 0.66
SMARCD3-206ENST00000470588 WNT10BO00744 389 aa19.14■□□□□ 0.66
SMARCD3-206ENST00000470588 ATP1A3P13637 1013 aa19.14■□□□□ 0.66
SMARCD3-206ENST00000470588 STAT6P42226 847 aa19.14■□□□□ 0.66
SMARCD3-206ENST00000470588 FMR1Q06787 632 aaKnown RBP eCLIP19.14■□□□□ 0.66
SMARCD3-206ENST00000470588 SEMA3FQ13275 785 aa19.14■□□□□ 0.66
SMARCD3-206ENST00000470588 SEPT2Q15019 361 aa19.14■□□□□ 0.66
SMARCD3-206ENST00000470588 RBM26Q5T8P6 1007 aaKnown RBP19.14■□□□□ 0.66
SMARCD3-206ENST00000470588 SIAH1Q8IUQ4 282 aa19.14■□□□□ 0.66
SMARCD3-206ENST00000470588 MICALL2Q8IY33 904 aa19.14■□□□□ 0.66
SMARCD3-206ENST00000470588 DISC1Q9NRI5 854 aa19.14■□□□□ 0.66
SMARCD3-206ENST00000470588 RMND1Q9NWS8 449 aa19.14■□□□□ 0.66
SMARCD3-206ENST00000470588 FAM196BA6NMK8 535 aa19.14■□□□□ 0.65
SMARCD3-206ENST00000470588 USP17L10C9JJH3 530 aa19.14■□□□□ 0.65
SMARCD3-206ENST00000470588 ZNF18P17022 549 aa19.14■□□□□ 0.65
SMARCD3-206ENST00000470588 KCTD1Q719H9 257 aa19.14■□□□□ 0.65
SMARCD3-206ENST00000470588 C17orf53Q8N3J3 647 aaPredicted RBP19.14■□□□□ 0.65
SMARCD3-206ENST00000470588 GMCL1P1Q8NEA9 526 aa19.14■□□□□ 0.65
SMARCD3-206ENST00000470588 CUEDC2Q9H467 287 aa19.14■□□□□ 0.65
SMARCD3-206ENST00000470588 TMEM260Q9NX78 707 aa19.14■□□□□ 0.65
SMARCD3-206ENST00000470588 NFE2L3Q9Y4A8 694 aa19.14■□□□□ 0.65
SMARCD3-206ENST00000470588 CNTNAP1P78357 1384 aa19.13■□□□□ 0.65
SMARCD3-206ENST00000470588 MYL1P05976 194 aa19.13■□□□□ 0.65
SMARCD3-206ENST00000470588 SLC16A2P36021 539 aa19.13■□□□□ 0.65
SMARCD3-206ENST00000470588 SLC1A4P43007 532 aa19.13■□□□□ 0.65
SMARCD3-206ENST00000470588 ICA1Q05084 483 aa19.13■□□□□ 0.65
SMARCD3-206ENST00000470588 KARSQ15046 597 aaKnown RBP19.13■□□□□ 0.65
SMARCD3-206ENST00000470588 SPATA1Q5VX52 437 aa19.13■□□□□ 0.65
SMARCD3-206ENST00000470588 TMC6Q7Z403 805 aa19.13■□□□□ 0.65
SMARCD3-206ENST00000470588 CCDC150Q8NCX0 1101 aa19.13■□□□□ 0.65
SMARCD3-206ENST00000470588 MAGEF1Q9HAY2 307 aa19.13■□□□□ 0.65
SMARCD3-206ENST00000470588 CNOT7Q9UIV1 285 aaKnown RBP19.13■□□□□ 0.65
SMARCD3-206ENST00000470588 SYNPO2Q9UMS6 1093 aa19.13■□□□□ 0.65
SMARCD3-206ENST00000470588 PPP1R3GB7ZBB8 358 aa19.12■□□□□ 0.65
SMARCD3-206ENST00000470588 H7C1D1 291 aa19.12■□□□□ 0.65
SMARCD3-206ENST00000470588 PPP1R11O60927 126 aaPredicted RBP19.12■□□□□ 0.65
SMARCD3-206ENST00000470588 CDK11BP21127 795 aaKnown RBP19.12■□□□□ 0.65
SMARCD3-206ENST00000470588 CASP1P29466 404 aa19.12■□□□□ 0.65
SMARCD3-206ENST00000470588 PRELPP51888 382 aa19.12■□□□□ 0.65
SMARCD3-206ENST00000470588 CUL4BQ13620 913 aa19.12■□□□□ 0.65
SMARCD3-206ENST00000470588 NBPF9Q3BBW0 867 aa19.12■□□□□ 0.65
SMARCD3-206ENST00000470588 DNTTIP2Q5QJE6 756 aaKnown RBP19.12■□□□□ 0.65
SMARCD3-206ENST00000470588 CUL5Q93034 780 aa19.12■□□□□ 0.65
SMARCD3-206ENST00000470588 MTRQ99707 1265 aa19.12■□□□□ 0.65
SMARCD3-206ENST00000470588 R3HCC1Q9Y3T6 440 aaKnown RBP19.12■□□□□ 0.65
SMARCD3-206ENST00000470588 CDC25AP30304 524 aa19.11■□□□□ 0.65
SMARCD3-206ENST00000470588 CLK2P49760 499 aaKnown RBP19.11■□□□□ 0.65
SMARCD3-206ENST00000470588 CABP7Q86V35 215 aa19.11■□□□□ 0.65
SMARCD3-206ENST00000470588 GMCL1Q96IK5 515 aa19.11■□□□□ 0.65
SMARCD3-206ENST00000470588 MED15Q96RN5 788 aa19.11■□□□□ 0.65
SMARCD3-206ENST00000470588 SYT17Q9BSW7 474 aa19.11■□□□□ 0.65
SMARCD3-206ENST00000470588 ZNF541Q9H0D2 1346 aa19.11■□□□□ 0.65
SMARCD3-206ENST00000470588 SBF1O95248 1867 aa19.11■□□□□ 0.65
SMARCD3-206ENST00000470588 F5H6K3 240 aa19.11■□□□□ 0.65
SMARCD3-206ENST00000470588 RPN1P04843 607 aaKnown RBP19.11■□□□□ 0.65
SMARCD3-206ENST00000470588 SKILP12757 684 aa19.11■□□□□ 0.65
SMARCD3-206ENST00000470588 KLRC3Q07444 240 aa19.11■□□□□ 0.65
SMARCD3-206ENST00000470588 ARID5BQ14865 1188 aa19.11■□□□□ 0.65
SMARCD3-206ENST00000470588 STAMQ92783 540 aa19.11■□□□□ 0.65
SMARCD3-206ENST00000470588 MTMR9Q96QG7 549 aa19.11■□□□□ 0.65
SMARCD3-206ENST00000470588 NAP1L4Q99733 375 aaKnown RBP19.11■□□□□ 0.65
SMARCD3-206ENST00000470588 BLZF1Q9H2G9 400 aa19.11■□□□□ 0.65
SMARCD3-206ENST00000470588 PSTPIP2Q9H939 334 aa19.11■□□□□ 0.65
SMARCD3-206ENST00000470588 TBC1D12O60347 775 aa19.1■□□□□ 0.65
SMARCD3-206ENST00000470588 GDF11O95390 407 aa19.1■□□□□ 0.65
SMARCD3-206ENST00000470588 CD44P16070 742 aaKnown RBP19.1■□□□□ 0.65
SMARCD3-206ENST00000470588 KIF4BQ2VIQ3 1234 aa19.1■□□□□ 0.65
SMARCD3-206ENST00000470588 NAALADL2Q58DX5 795 aa19.1■□□□□ 0.65
SMARCD3-206ENST00000470588 ZNF658Q5TYW1 1059 aaPredicted RBP19.1■□□□□ 0.65
SMARCD3-206ENST00000470588 PPP4R3AQ6IN85 833 aa19.1■□□□□ 0.65
SMARCD3-206ENST00000470588 GPC2Q8N158 579 aa19.1■□□□□ 0.65
SMARCD3-206ENST00000470588 RASSF8Q8NHQ8 419 aa19.1■□□□□ 0.65
SMARCD3-206ENST00000470588 SHTN1A0MZ66 631 aa19.09■□□□□ 0.65
SMARCD3-206ENST00000470588 PP2D1A8MPX8 630 aa19.09■□□□□ 0.65
SMARCD3-206ENST00000470588 TPM2P07951 284 aa19.09■□□□□ 0.65
SMARCD3-206ENST00000470588 CCZ1BP86790 482 aa19.09■□□□□ 0.65
SMARCD3-206ENST00000470588 CCZ1P86791 482 aaPredicted RBP19.09■□□□□ 0.65
SMARCD3-206ENST00000470588 CALCRLQ16602 461 aa19.09■□□□□ 0.65
SMARCD3-206ENST00000470588 SHROOM1Q2M3G4 852 aaPredicted RBP19.09■□□□□ 0.65
SMARCD3-206ENST00000470588 VSTM4Q8IW00 320 aa19.09■□□□□ 0.65
SMARCD3-206ENST00000470588 TMEM39BQ9GZU3 492 aa19.09■□□□□ 0.65
SMARCD3-206ENST00000470588 KBTBD4Q9NVX7 518 aa19.09■□□□□ 0.65
SMARCD3-206ENST00000470588 EDIL3O43854 480 aa19.09■□□□□ 0.65
SMARCD3-206ENST00000470588 GH2P01242 217 aa19.09■□□□□ 0.65
SMARCD3-206ENST00000470588 FXR2P51116 673 aaKnown RBP eCLIP19.09■□□□□ 0.65
SMARCD3-206ENST00000470588 PDIA5Q14554 519 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms