RNA–Protein interactions for RNA: ENST00000461350.5

COPS7B-217, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 3,299 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-217ENST00000461350 MAPK8IP2Q13387 824 aaPredicted RBP12.66□□□□□ -0.38
COPS7B-217ENST00000461350 SMC1AQ14683 1233 aaKnown RBP12.66□□□□□ -0.38
COPS7B-217ENST00000461350 NBPF9Q3BBW0 867 aa12.66□□□□□ -0.38
COPS7B-217ENST00000461350 TYW1BQ6NUM6 668 aa12.66□□□□□ -0.38
COPS7B-217ENST00000461350 GPR161Q8N6U8 529 aaKnown RBP12.66□□□□□ -0.38
COPS7B-217ENST00000461350 MAP3K14Q99558 947 aa12.66□□□□□ -0.38
COPS7B-217ENST00000461350 DESI2Q9BSY9 194 aa12.66□□□□□ -0.38
COPS7B-217ENST00000461350 PLIN4Q96Q06 1357 aa12.65□□□□□ -0.38
COPS7B-217ENST00000461350 PPP6R2O75170 966 aa12.65□□□□□ -0.38
COPS7B-217ENST00000461350 TTLL1O95922 423 aa12.65□□□□□ -0.38
COPS7B-217ENST00000461350 PDHBP11177 359 aa12.65□□□□□ -0.38
COPS7B-217ENST00000461350 KRT2P35908 639 aa12.65□□□□□ -0.38
COPS7B-217ENST00000461350 JAG1P78504 1218 aa12.65□□□□□ -0.38
COPS7B-217ENST00000461350 KRBA2Q6ZNG9 492 aa12.65□□□□□ -0.38
COPS7B-217ENST00000461350 TOGARAM2Q6ZUX3 1019 aa12.65□□□□□ -0.38
COPS7B-217ENST00000461350 HEATR3Q7Z4Q2 680 aa12.65□□□□□ -0.38
COPS7B-217ENST00000461350 TXLNBQ8N3L3 684 aa12.65□□□□□ -0.38
COPS7B-217ENST00000461350 GPCPD1Q9NPB8 672 aa12.65□□□□□ -0.38
COPS7B-217ENST00000461350 TMOD2Q9NZR1 351 aa12.65□□□□□ -0.38
COPS7B-217ENST00000461350 PCDHB6Q9Y5E3 794 aa12.65□□□□□ -0.38
COPS7B-217ENST00000461350 FOXN1O15353 648 aa12.65□□□□□ -0.38
COPS7B-217ENST00000461350 NOVP48745 357 aa12.65□□□□□ -0.38
COPS7B-217ENST00000461350 RRP1BQ14684 758 aaKnown RBP12.65□□□□□ -0.38
COPS7B-217ENST00000461350 TMEM139Q8IV31 216 aa12.65□□□□□ -0.38
COPS7B-217ENST00000461350 CCDC12Q8WUD4 166 aaPredicted RBP12.65□□□□□ -0.38
COPS7B-217ENST00000461350 SMARCE1Q969G3 411 aa12.65□□□□□ -0.38
COPS7B-217ENST00000461350 INTS13Q9NVM9 706 aa12.65□□□□□ -0.38
COPS7B-217ENST00000461350 GJA3Q9Y6H8 435 aa12.65□□□□□ -0.38
COPS7B-217ENST00000461350 MYH4Q9Y623 1939 aa12.65□□□□□ -0.39
COPS7B-217ENST00000461350 WNT7AO00755 349 aa12.64□□□□□ -0.39
COPS7B-217ENST00000461350 ATP8B1O43520 1251 aa12.64□□□□□ -0.39
COPS7B-217ENST00000461350 GNAQP50148 359 aa12.64□□□□□ -0.39
COPS7B-217ENST00000461350 SEPT2Q15019 361 aa12.64□□□□□ -0.39
COPS7B-217ENST00000461350 PTPAQ15257 358 aa12.64□□□□□ -0.39
COPS7B-217ENST00000461350 RESP18Q5W5W9 173 aa12.64□□□□□ -0.39
COPS7B-217ENST00000461350 FOXP4Q8IVH2 680 aaPredicted RBP12.64□□□□□ -0.39
COPS7B-217ENST00000461350 TRMT44Q8IYL2 757 aaKnown RBP12.64□□□□□ -0.39
COPS7B-217ENST00000461350 RGS22Q8NE09 1264 aa12.64□□□□□ -0.39
COPS7B-217ENST00000461350 TMEM39BQ9GZU3 492 aa12.64□□□□□ -0.39
COPS7B-217ENST00000461350 VPS33BQ9H267 617 aa12.64□□□□□ -0.39
COPS7B-217ENST00000461350 NFE2L3Q9Y4A8 694 aa12.64□□□□□ -0.39
COPS7B-217ENST00000461350 ENTPD3O75355 529 aa12.64□□□□□ -0.39
COPS7B-217ENST00000461350 MAP3K9P80192 1104 aa12.64□□□□□ -0.39
COPS7B-217ENST00000461350 AGBL3Q8NEM8 1001 aa12.64□□□□□ -0.39
COPS7B-217ENST00000461350 RASGRP4Q8TDF6 673 aa12.64□□□□□ -0.39
COPS7B-217ENST00000461350 PARD6BQ9BYG5 372 aa12.64□□□□□ -0.39
COPS7B-217ENST00000461350 CUTAO60888 179 aa12.64□□□□□ -0.39
COPS7B-217ENST00000461350 WWC2Q6AWC2 1192 aa12.64□□□□□ -0.39
COPS7B-217ENST00000461350 DHX58Q96C10 678 aa12.64□□□□□ -0.39
COPS7B-217ENST00000461350 HOOK1Q9UJC3 728 aaKnown RBP12.64□□□□□ -0.39
COPS7B-217ENST00000461350 MRFAP1Q9Y605 127 aa12.64□□□□□ -0.39
COPS7B-217ENST00000461350 WNT10BO00744 389 aa12.63□□□□□ -0.39
COPS7B-217ENST00000461350 MYO1BO43795 1136 aa12.63□□□□□ -0.39
COPS7B-217ENST00000461350 STX10O60499 249 aa12.63□□□□□ -0.39
COPS7B-217ENST00000461350 EEF2P13639 858 aaKnown RBP12.63□□□□□ -0.39
COPS7B-217ENST00000461350 SPDYE2Q495Y8 402 aa12.63□□□□□ -0.39
COPS7B-217ENST00000461350 SPECC1LQ69YQ0 1117 aa12.63□□□□□ -0.39
COPS7B-217ENST00000461350 TTBK2Q6IQ55 1244 aa12.63□□□□□ -0.39
COPS7B-217ENST00000461350 GOLGA1Q92805 767 aa12.63□□□□□ -0.39
COPS7B-217ENST00000461350 PIGSQ96S52 555 aa12.63□□□□□ -0.39
COPS7B-217ENST00000461350 CNTNAP1P78357 1384 aa12.63□□□□□ -0.39
COPS7B-217ENST00000461350 SLC16A2P36021 539 aa12.63□□□□□ -0.39
COPS7B-217ENST00000461350 GYS2P54840 703 aa12.63□□□□□ -0.39
COPS7B-217ENST00000461350 KCTD1Q719H9 257 aa12.63□□□□□ -0.39
COPS7B-217ENST00000461350 MIGA2Q7L4E1 593 aa12.63□□□□□ -0.39
COPS7B-217ENST00000461350 ZBTB9Q96C00 473 aa12.63□□□□□ -0.39
COPS7B-217ENST00000461350 CCDC17Q96LX7 622 aa12.63□□□□□ -0.39
COPS7B-217ENST00000461350 NPM3O75607 178 aaKnown RBP12.63□□□□□ -0.39
COPS7B-217ENST00000461350 GH2P01242 217 aa12.63□□□□□ -0.39
COPS7B-217ENST00000461350 CAPN2P17655 700 aa12.63□□□□□ -0.39
COPS7B-217ENST00000461350 BMP6P22004 513 aa12.63□□□□□ -0.39
COPS7B-217ENST00000461350 GRIN1Q05586 938 aa12.63□□□□□ -0.39
COPS7B-217ENST00000461350 TATDN1Q6P1N9 297 aa12.63□□□□□ -0.39
COPS7B-217ENST00000461350 PIK3AP1Q6ZUJ8 805 aa12.63□□□□□ -0.39
COPS7B-217ENST00000461350 TC2NQ8N9U0 490 aa12.63□□□□□ -0.39
COPS7B-217ENST00000461350 MYOZ2Q9NPC6 264 aa12.63□□□□□ -0.39
COPS7B-217ENST00000461350 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.63□□□□□ -0.39
COPS7B-217ENST00000461350 RAD51AP2Q09MP3 1159 aa12.62□□□□□ -0.39
COPS7B-217ENST00000461350 CCDC96Q2M329 555 aa12.62□□□□□ -0.39
COPS7B-217ENST00000461350 ABCB5Q2M3G0 1257 aa12.62□□□□□ -0.39
COPS7B-217ENST00000461350 SAMD7Q7Z3H4 446 aa12.62□□□□□ -0.39
COPS7B-217ENST00000461350 KRI1Q8N9T8 703 aaKnown RBP12.62□□□□□ -0.39
COPS7B-217ENST00000461350 RABGGTAQ92696 567 aa12.62□□□□□ -0.39
COPS7B-217ENST00000461350 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.62□□□□□ -0.39
COPS7B-217ENST00000461350 BRMS1Q9HCU9 246 aa12.62□□□□□ -0.39
COPS7B-217ENST00000461350 LZTFL1Q9NQ48 299 aa12.62□□□□□ -0.39
COPS7B-217ENST00000461350 ATRNL1Q5VV63 1379 aa12.62□□□□□ -0.39
COPS7B-217ENST00000461350 RILPL1Q5EBL4 403 aa12.62□□□□□ -0.39
COPS7B-217ENST00000461350 SIAH1Q8IUQ4 282 aa12.62□□□□□ -0.39
COPS7B-217ENST00000461350 TNFRSF25Q93038 417 aa12.62□□□□□ -0.39
COPS7B-217ENST00000461350 SPZ1Q9BXG8 430 aa12.62□□□□□ -0.39
COPS7B-217ENST00000461350 IRX2Q9BZI1 471 aaPredicted RBP12.62□□□□□ -0.39
COPS7B-217ENST00000461350 MAN1B1Q9UKM7 699 aa12.62□□□□□ -0.39
COPS7B-217ENST00000461350 ASTN2O75129 1339 aaPredicted RBP12.62□□□□□ -0.39
COPS7B-217ENST00000461350 GREB1LQ9C091 1923 aaPredicted RBP12.61□□□□□ -0.39
COPS7B-217ENST00000461350 TULP2O00295 520 aa12.61□□□□□ -0.39
COPS7B-217ENST00000461350 LMAN1P49257 510 aa12.61□□□□□ -0.39
COPS7B-217ENST00000461350 GMPSP49915 693 aaPredicted RBP12.61□□□□□ -0.39
COPS7B-217ENST00000461350 ICA1Q05084 483 aa12.61□□□□□ -0.39
COPS7B-217ENST00000461350 FMR1Q06787 632 aaKnown RBP eCLIP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms