RNA–Protein interactions for RNA: ENST00000461154.1

SHANK1-205, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 4

Gene SHANK1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-205ENST00000461154 NPLOC4Q8TAT6 608 aa18.87■□□□□ 0.61
SHANK1-205ENST00000461154 U2AF1L4Q8WU68 220 aaKnown RBP18.87■□□□□ 0.61
SHANK1-205ENST00000461154 TRERF1Q96PN7 1200 aa18.87■□□□□ 0.61
SHANK1-205ENST00000461154 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.87■□□□□ 0.61
SHANK1-205ENST00000461154 BRPF3Q9ULD4 1205 aa18.87■□□□□ 0.61
SHANK1-205ENST00000461154 NAP1L2Q9ULW6 460 aaPredicted RBP18.87■□□□□ 0.61
SHANK1-205ENST00000461154 COBLO75128 1261 aa18.86■□□□□ 0.61
SHANK1-205ENST00000461154 RXRAP19793 462 aa18.86■□□□□ 0.61
SHANK1-205ENST00000461154 CACNB2Q08289 660 aaPredicted RBP18.86■□□□□ 0.61
SHANK1-205ENST00000461154 TRAF1Q13077 416 aa18.86■□□□□ 0.61
SHANK1-205ENST00000461154 PPP2R5BQ15173 497 aa18.86■□□□□ 0.61
SHANK1-205ENST00000461154 RTN1Q16799 776 aa18.86■□□□□ 0.61
SHANK1-205ENST00000461154 OLFML2BQ68BL8 750 aa18.86■□□□□ 0.61
SHANK1-205ENST00000461154 CCDC144CPQ8IYA2 1237 aa18.86■□□□□ 0.61
SHANK1-205ENST00000461154 ANKRD35Q8N283 1001 aa18.86■□□□□ 0.61
SHANK1-205ENST00000461154 DDX11Q96FC9 970 aa18.86■□□□□ 0.61
SHANK1-205ENST00000461154 DEFB118Q96PH6 123 aa18.86■□□□□ 0.61
SHANK1-205ENST00000461154 SPZ1Q9BXG8 430 aa18.86■□□□□ 0.61
SHANK1-205ENST00000461154 RIOX1Q9H6W3 641 aa18.86■□□□□ 0.61
SHANK1-205ENST00000461154 PDRG1Q9NUG6 133 aa18.86■□□□□ 0.61
SHANK1-205ENST00000461154 MYH6P13533 1939 aa18.86■□□□□ 0.61
SHANK1-205ENST00000461154 RBBP6Q7Z6E9 1792 aaKnown RBP18.86■□□□□ 0.61
SHANK1-205ENST00000461154 GOLGA8AA7E2F4 631 aa18.85■□□□□ 0.61
SHANK1-205ENST00000461154 GOLGA8BA8MQT2 603 aa18.85■□□□□ 0.61
SHANK1-205ENST00000461154 ZBTB5O15062 677 aa18.85■□□□□ 0.61
SHANK1-205ENST00000461154 TFRCP02786 760 aaKnown RBP18.85■□□□□ 0.61
SHANK1-205ENST00000461154 APOBRQ0VD83 1088 aa18.85■□□□□ 0.61
SHANK1-205ENST00000461154 QRICH1Q2TAL8 776 aa18.85■□□□□ 0.61
SHANK1-205ENST00000461154 FBXO11Q86XK2 927 aa18.85■□□□□ 0.61
SHANK1-205ENST00000461154 RAB11FIP4Q86YS3 637 aa18.85■□□□□ 0.61
SHANK1-205ENST00000461154 MTMR8Q96EF0 704 aa18.85■□□□□ 0.61
SHANK1-205ENST00000461154 C22orf23Q9BZE7 217 aa18.85■□□□□ 0.61
SHANK1-205ENST00000461154 FLRT1Q9NZU1 646 aa18.85■□□□□ 0.61
SHANK1-205ENST00000461154 DIS3Q9Y2L1 958 aaKnown RBP18.85■□□□□ 0.61
SHANK1-205ENST00000461154 ZNFX1Q9P2E3 1918 aaKnown RBP18.84■□□□□ 0.61
SHANK1-205ENST00000461154 HTTP42858 3142 aa18.84■□□□□ 0.61
SHANK1-205ENST00000461154 PFASO15067 1338 aa18.84■□□□□ 0.61
SHANK1-205ENST00000461154 ABCB11O95342 1321 aa18.84■□□□□ 0.61
SHANK1-205ENST00000461154 CCDC196A0A1B0GTZ2 297 aa18.84■□□□□ 0.61
SHANK1-205ENST00000461154 METAP2P50579 478 aaKnown RBP eCLIP18.84■□□□□ 0.61
SHANK1-205ENST00000461154 USH1GQ495M9 461 aa18.84■□□□□ 0.61
SHANK1-205ENST00000461154 TMTC3Q6ZXV5 915 aa18.84■□□□□ 0.61
SHANK1-205ENST00000461154 HOMER1Q86YM7 354 aa18.84■□□□□ 0.61
SHANK1-205ENST00000461154 RRP36Q96EU6 259 aaKnown RBP18.84■□□□□ 0.61
SHANK1-205ENST00000461154 AMNQ9BXJ7 453 aa18.84■□□□□ 0.61
SHANK1-205ENST00000461154 PNMA6FA0A0J9YX94 578 aa18.83■□□□□ 0.6
SHANK1-205ENST00000461154 CYTH3O43739 400 aa18.83■□□□□ 0.6
SHANK1-205ENST00000461154 EVCP57679 992 aa18.83■□□□□ 0.6
SHANK1-205ENST00000461154 TOB2Q14106 344 aaPredicted RBP18.83■□□□□ 0.6
SHANK1-205ENST00000461154 SHISA4Q96DD7 197 aa18.83■□□□□ 0.6
SHANK1-205ENST00000461154 MAML3Q96JK9 1138 aa18.83■□□□□ 0.6
SHANK1-205ENST00000461154 PIGSQ96S52 555 aa18.83■□□□□ 0.6
SHANK1-205ENST00000461154 ALDH8A1Q9H2A2 487 aaPredicted RBP18.83■□□□□ 0.6
SHANK1-205ENST00000461154 SEC63Q9UGP8 760 aaKnown RBP18.83■□□□□ 0.6
SHANK1-205ENST00000461154 PLEKHA8P1O95397 391 aa18.82■□□□□ 0.6
SHANK1-205ENST00000461154 IGHA2P01877 340 aa18.82■□□□□ 0.6
SHANK1-205ENST00000461154 PGK2P07205 417 aa18.82■□□□□ 0.6
SHANK1-205ENST00000461154 CYP2C19P33261 490 aa18.82■□□□□ 0.6
SHANK1-205ENST00000461154 ANKRD1Q15327 319 aa18.82■□□□□ 0.6
SHANK1-205ENST00000461154 MUM1L1Q5H9M0 696 aa18.82■□□□□ 0.6
SHANK1-205ENST00000461154 NSMFQ6X4W1 530 aa18.82■□□□□ 0.6
SHANK1-205ENST00000461154 SRBD1Q8N5C6 995 aaKnown RBP18.82■□□□□ 0.6
SHANK1-205ENST00000461154 MAF1Q9H063 256 aa18.82■□□□□ 0.6
SHANK1-205ENST00000461154 CRISPLD2Q9H0B8 497 aa18.82■□□□□ 0.6
SHANK1-205ENST00000461154 A1CFQ9NQ94 594 aaKnown RBP18.82■□□□□ 0.6
SHANK1-205ENST00000461154 MRPL11Q9Y3B7 192 aaKnown RBP18.82■□□□□ 0.6
SHANK1-205ENST00000461154 PLXNA1Q9UIW2 1896 aa18.82■□□□□ 0.6
SHANK1-205ENST00000461154 NID2Q14112 1375 aa18.81■□□□□ 0.6
SHANK1-205ENST00000461154 DNAJC25-GNG10A0A024R161 153 aa18.81■□□□□ 0.6
SHANK1-205ENST00000461154 RBM25P49756 843 aaKnown RBP18.81■□□□□ 0.6
SHANK1-205ENST00000461154 SLC35G1Q2M3R5 365 aa18.81■□□□□ 0.6
SHANK1-205ENST00000461154 ZNF792Q3KQV3 632 aa18.81■□□□□ 0.6
SHANK1-205ENST00000461154 MCF2L2Q86YR7 1114 aa18.81■□□□□ 0.6
SHANK1-205ENST00000461154 ZNF274Q96GC6 653 aaPredicted RBP18.81■□□□□ 0.6
SHANK1-205ENST00000461154 PCDHA1Q9Y5I3 950 aa18.81■□□□□ 0.6
SHANK1-205ENST00000461154 POTEB2H3BUK9 544 aa18.8■□□□□ 0.6
SHANK1-205ENST00000461154 NFIBO00712 420 aa18.8■□□□□ 0.6
SHANK1-205ENST00000461154 MSCO60682 206 aa18.8■□□□□ 0.6
SHANK1-205ENST00000461154 TAL1P17542 331 aaPredicted RBP18.8■□□□□ 0.6
SHANK1-205ENST00000461154 CCND3P30281 292 aaPredicted RBP18.8■□□□□ 0.6
SHANK1-205ENST00000461154 NEK4P51957 841 aa18.8■□□□□ 0.6
SHANK1-205ENST00000461154 CCDC82Q8N4S0 544 aa18.8■□□□□ 0.6
SHANK1-205ENST00000461154 RGS22Q8NE09 1264 aa18.8■□□□□ 0.6
SHANK1-205ENST00000461154 CLEC4DQ8WXI8 215 aa18.8■□□□□ 0.6
SHANK1-205ENST00000461154 CYP39A1Q9NYL5 469 aa18.8■□□□□ 0.6
SHANK1-205ENST00000461154 SMCHD1A6NHR9 2005 aa18.79■□□□□ 0.6
SHANK1-205ENST00000461154 PTPDC1A2A3K4 754 aa18.79■□□□□ 0.6
SHANK1-205ENST00000461154 FARP2O94887 1054 aaPredicted RBP18.79■□□□□ 0.6
SHANK1-205ENST00000461154 CYBAP13498 195 aa18.79■□□□□ 0.6
SHANK1-205ENST00000461154 CNGA1P29973 690 aa18.79■□□□□ 0.6
SHANK1-205ENST00000461154 PDIA3P30101 505 aaKnown RBP18.79■□□□□ 0.6
SHANK1-205ENST00000461154 RNF207Q6ZRF8 634 aa18.79■□□□□ 0.6
SHANK1-205ENST00000461154 ZNF467Q7Z7K2 595 aaPredicted RBP18.79■□□□□ 0.6
SHANK1-205ENST00000461154 CMTR1Q8N1G2 835 aaKnown RBP18.79■□□□□ 0.6
SHANK1-205ENST00000461154 MSL3Q8N5Y2 521 aaKnown RBP18.79■□□□□ 0.6
SHANK1-205ENST00000461154 ANKLE1Q8NAG6 615 aa18.79■□□□□ 0.6
SHANK1-205ENST00000461154 PIBF1Q8WXW3 757 aa18.79■□□□□ 0.6
SHANK1-205ENST00000461154 TINF2Q9BSI4 451 aa18.79■□□□□ 0.6
SHANK1-205ENST00000461154 BACH2Q9BYV9 841 aa18.79■□□□□ 0.6
SHANK1-205ENST00000461154 NRBP1Q9UHY1 535 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms