RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 SLC39A5Q6ZMH5 540 aa19.92■□□□□ 0.78
PRPF40A-204ENST00000450303 CCDC144CPQ8IYA2 1237 aa19.92■□□□□ 0.78
PRPF40A-204ENST00000450303 PURBQ96QR8 312 aaKnown RBP19.92■□□□□ 0.78
PRPF40A-204ENST00000450303 ZSCAN10Q96SZ4 725 aaPredicted RBP19.92■□□□□ 0.78
PRPF40A-204ENST00000450303 UBA5Q9GZZ9 404 aa19.92■□□□□ 0.78
PRPF40A-204ENST00000450303 ATP11BQ9Y2G3 1177 aa19.92■□□□□ 0.78
PRPF40A-204ENST00000450303 SNHG28P0DPA3 235 aa19.91■□□□□ 0.78
PRPF40A-204ENST00000450303 MAGEA10P43363 369 aaPredicted RBP19.91■□□□□ 0.78
PRPF40A-204ENST00000450303 IRX5P78411 483 aaPredicted RBP19.91■□□□□ 0.78
PRPF40A-204ENST00000450303 PNMA1Q8ND90 353 aa19.91■□□□□ 0.78
PRPF40A-204ENST00000450303 GDF15Q99988 308 aa19.91■□□□□ 0.78
PRPF40A-204ENST00000450303 KRT23Q9C075 422 aa19.91■□□□□ 0.78
PRPF40A-204ENST00000450303 KAT14Q9H8E8 782 aa19.91■□□□□ 0.78
PRPF40A-204ENST00000450303 CYP39A1Q9NYL5 469 aa19.91■□□□□ 0.78
PRPF40A-204ENST00000450303 NECTIN1Q15223 517 aa19.9■□□□□ 0.78
PRPF40A-204ENST00000450303 CCDC144BQ3MJ40 725 aa19.9■□□□□ 0.78
PRPF40A-204ENST00000450303 CCDC178Q5BJE1 867 aa19.9■□□□□ 0.78
PRPF40A-204ENST00000450303 RNF180Q86T96 592 aa19.9■□□□□ 0.78
PRPF40A-204ENST00000450303 ENAHQ8N8S7 591 aaPredicted RBP19.9■□□□□ 0.78
PRPF40A-204ENST00000450303 C22orf23Q9BZE7 217 aa19.9■□□□□ 0.78
PRPF40A-204ENST00000450303 ABHD16BQ9H3Z7 469 aa19.9■□□□□ 0.78
PRPF40A-204ENST00000450303 TNKSO95271 1327 aa19.9■□□□□ 0.78
PRPF40A-204ENST00000450303 LCTP09848 1927 aa19.9■□□□□ 0.78
PRPF40A-204ENST00000450303 NFIBO00712 420 aa19.89■□□□□ 0.77
PRPF40A-204ENST00000450303 ASTN1O14525 1302 aa19.89■□□□□ 0.77
PRPF40A-204ENST00000450303 ADCY6O43306 1168 aa19.89■□□□□ 0.77
PRPF40A-204ENST00000450303 ADAMTS4O75173 837 aa19.89■□□□□ 0.77
PRPF40A-204ENST00000450303 HSPA4P34932 840 aa19.89■□□□□ 0.77
PRPF40A-204ENST00000450303 MDM2Q00987 491 aaPredicted RBP19.89■□□□□ 0.77
PRPF40A-204ENST00000450303 BAATQ14032 418 aaPredicted RBP19.89■□□□□ 0.77
PRPF40A-204ENST00000450303 CREB3L3Q68CJ9 461 aa19.89■□□□□ 0.77
PRPF40A-204ENST00000450303 CYB5R4Q7L1T6 521 aa19.89■□□□□ 0.77
PRPF40A-204ENST00000450303 ANKS1AQ92625 1134 aa19.89■□□□□ 0.77
PRPF40A-204ENST00000450303 CNNM2Q9H8M5 875 aa19.89■□□□□ 0.77
PRPF40A-204ENST00000450303 SYNRGQ9UMZ2 1314 aa19.89■□□□□ 0.77
PRPF40A-204ENST00000450303 PHF24Q9UPV7 400 aa19.89■□□□□ 0.77
PRPF40A-204ENST00000450303 MYADML2A6NDP7 307 aa19.88■□□□□ 0.77
PRPF40A-204ENST00000450303 CYP21A2P08686 494 aa19.88■□□□□ 0.77
PRPF40A-204ENST00000450303 TRIM60Q495X7 471 aa19.88■□□□□ 0.77
PRPF40A-204ENST00000450303 GPATCH4Q5T3I0 446 aaKnown RBP19.88■□□□□ 0.77
PRPF40A-204ENST00000450303 UBAC1Q9BSL1 405 aa19.88■□□□□ 0.77
PRPF40A-204ENST00000450303 KATNBL1Q9H079 304 aa19.88■□□□□ 0.77
PRPF40A-204ENST00000450303 TAF6LQ9Y6J9 622 aa19.88■□□□□ 0.77
PRPF40A-204ENST00000450303 PTPDC1A2A3K4 754 aa19.87■□□□□ 0.77
PRPF40A-204ENST00000450303 ASB14A6NK59 587 aa19.87■□□□□ 0.77
PRPF40A-204ENST00000450303 SLC27A2O14975 620 aa19.87■□□□□ 0.77
PRPF40A-204ENST00000450303 NT5C2P49902 561 aa19.87■□□□□ 0.77
PRPF40A-204ENST00000450303 KRT32Q14532 448 aa19.87■□□□□ 0.77
PRPF40A-204ENST00000450303 EEPD1Q7L9B9 569 aa19.87■□□□□ 0.77
PRPF40A-204ENST00000450303 UBE2OQ9C0C9 1292 aaKnown RBP19.87■□□□□ 0.77
PRPF40A-204ENST00000450303 DNAH12Q6ZR08 3092 aa19.87■□□□□ 0.77
PRPF40A-204ENST00000450303 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.86■□□□□ 0.77
PRPF40A-204ENST00000450303 A0A1W2PQ45 241 aaPredicted RBP19.86■□□□□ 0.77
PRPF40A-204ENST00000450303 A0A1W2PQY0 241 aa19.86■□□□□ 0.77
PRPF40A-204ENST00000450303 DUSP11O75319 330 aaKnown RBP19.86■□□□□ 0.77
PRPF40A-204ENST00000450303 CALML3P27482 149 aa19.86■□□□□ 0.77
PRPF40A-204ENST00000450303 BMP8BP34820 402 aa19.86■□□□□ 0.77
PRPF40A-204ENST00000450303 ANAPC15P60006 121 aa19.86■□□□□ 0.77
PRPF40A-204ENST00000450303 KCNA10Q16322 511 aa19.86■□□□□ 0.77
PRPF40A-204ENST00000450303 USH1GQ495M9 461 aa19.86■□□□□ 0.77
PRPF40A-204ENST00000450303 CLEC4DQ8WXI8 215 aa19.86■□□□□ 0.77
PRPF40A-204ENST00000450303 VAT1LQ9HCJ6 419 aa19.86■□□□□ 0.77
PRPF40A-204ENST00000450303 PRDM5Q9NQX1 630 aaPredicted RBP19.86■□□□□ 0.77
PRPF40A-204ENST00000450303 C6orf222P0C671 652 aaPredicted RBP19.85■□□□□ 0.77
PRPF40A-204ENST00000450303 PTGS1P23219 599 aa19.85■□□□□ 0.77
PRPF40A-204ENST00000450303 RBM25P49756 843 aaKnown RBP19.85■□□□□ 0.77
PRPF40A-204ENST00000450303 ACLYP53396 1101 aa19.85■□□□□ 0.77
PRPF40A-204ENST00000450303 TRDNQ13061 729 aa19.85■□□□□ 0.77
PRPF40A-204ENST00000450303 SEC23AQ15436 765 aa19.85■□□□□ 0.77
PRPF40A-204ENST00000450303 IFIT1BQ5T764 474 aaKnown RBP19.85■□□□□ 0.77
PRPF40A-204ENST00000450303 SLC30A10Q6XR72 485 aa19.85■□□□□ 0.77
PRPF40A-204ENST00000450303 NOL8Q76FK4 1167 aaKnown RBP19.85■□□□□ 0.77
PRPF40A-204ENST00000450303 ADGRF4Q8IZF3 695 aa19.85■□□□□ 0.77
PRPF40A-204ENST00000450303 KLHDC9Q8NEP7 349 aa19.85■□□□□ 0.77
PRPF40A-204ENST00000450303 KCNB2Q92953 911 aa19.85■□□□□ 0.77
PRPF40A-204ENST00000450303 IPO9Q96P70 1041 aaKnown RBP19.85■□□□□ 0.77
PRPF40A-204ENST00000450303 PDGFCQ9NRA1 345 aa19.85■□□□□ 0.77
PRPF40A-204ENST00000450303 PRKAG2Q9UGJ0 569 aa19.85■□□□□ 0.77
PRPF40A-204ENST00000450303 MYH6P13533 1939 aa19.84■□□□□ 0.77
PRPF40A-204ENST00000450303 A0A1W2PPC1 479 aa19.84■□□□□ 0.77
PRPF40A-204ENST00000450303 SOX1O00570 391 aaPredicted RBP19.84■□□□□ 0.77
PRPF40A-204ENST00000450303 DHX16O60231 1041 aaKnown RBP19.84■□□□□ 0.77
PRPF40A-204ENST00000450303 PARP1P09874 1014 aaKnown RBP19.84■□□□□ 0.77
PRPF40A-204ENST00000450303 TNFAIP2Q03169 654 aa19.84■□□□□ 0.77
PRPF40A-204ENST00000450303 TLE2Q04725 743 aa19.84■□□□□ 0.77
PRPF40A-204ENST00000450303 SNX17Q15036 470 aa19.84■□□□□ 0.77
PRPF40A-204ENST00000450303 CDC37Q16543 378 aaPredicted RBP19.84■□□□□ 0.77
PRPF40A-204ENST00000450303 TSGA10IPQ3SY00 556 aa19.84■□□□□ 0.77
PRPF40A-204ENST00000450303 RNF207Q6ZRF8 634 aa19.84■□□□□ 0.77
PRPF40A-204ENST00000450303 CHST3Q7LGC8 479 aa19.84■□□□□ 0.77
PRPF40A-204ENST00000450303 SH3RF1Q7Z6J0 888 aa19.84■□□□□ 0.77
PRPF40A-204ENST00000450303 FBXO16Q8IX29 292 aaPredicted RBP19.84■□□□□ 0.77
PRPF40A-204ENST00000450303 TSEN34Q9BSV6 310 aaKnown RBP19.84■□□□□ 0.77
PRPF40A-204ENST00000450303 LRRC37A2A6NM11 1700 aa19.84■□□□□ 0.77
PRPF40A-204ENST00000450303 RANBP2P49792 3224 aaKnown RBP19.83■□□□□ 0.77
PRPF40A-204ENST00000450303 E7EWF7 191 aa19.83■□□□□ 0.77
PRPF40A-204ENST00000450303 PSMA5P28066 241 aa19.83■□□□□ 0.77
PRPF40A-204ENST00000450303 ALDH5A1P51649 535 aaPredicted RBP19.83■□□□□ 0.77
PRPF40A-204ENST00000450303 BEX3Q00994 111 aa19.83■□□□□ 0.77
PRPF40A-204ENST00000450303 ASPRV1Q53RT3 343 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms