RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 CPA1P15085 419 aa12.57□□□□□ -0.4
HDAC6-211ENST00000443563 CCL14Q16627 93 aa12.57□□□□□ -0.4
HDAC6-211ENST00000443563 RTN1Q16799 776 aa12.57□□□□□ -0.4
HDAC6-211ENST00000443563 ZNF792Q3KQV3 632 aa12.57□□□□□ -0.4
HDAC6-211ENST00000443563 USH1GQ495M9 461 aa12.57□□□□□ -0.4
HDAC6-211ENST00000443563 ZNF467Q7Z7K2 595 aaPredicted RBP12.57□□□□□ -0.4
HDAC6-211ENST00000443563 MICU3Q86XE3 530 aa12.57□□□□□ -0.4
HDAC6-211ENST00000443563 MCF2L2Q86YR7 1114 aa12.57□□□□□ -0.4
HDAC6-211ENST00000443563 MSL3Q8N5Y2 521 aaKnown RBP12.57□□□□□ -0.4
HDAC6-211ENST00000443563 RGS22Q8NE09 1264 aa12.57□□□□□ -0.4
HDAC6-211ENST00000443563 NPLOC4Q8TAT6 608 aa12.57□□□□□ -0.4
HDAC6-211ENST00000443563 BRF1Q92994 677 aa12.57□□□□□ -0.4
HDAC6-211ENST00000443563 RRP36Q96EU6 259 aaKnown RBP12.57□□□□□ -0.4
HDAC6-211ENST00000443563 MAML3Q96JK9 1138 aa12.57□□□□□ -0.4
HDAC6-211ENST00000443563 UPF2Q9HAU5 1272 aaKnown RBP12.57□□□□□ -0.4
HDAC6-211ENST00000443563 SEC63Q9UGP8 760 aaKnown RBP12.57□□□□□ -0.4
HDAC6-211ENST00000443563 NAP1L2Q9ULW6 460 aaPredicted RBP12.57□□□□□ -0.4
HDAC6-211ENST00000443563 RPTORQ8N122 1335 aa12.57□□□□□ -0.4
HDAC6-211ENST00000443563 BRCA2P51587 3418 aa12.56□□□□□ -0.4
HDAC6-211ENST00000443563 PNMA6FA0A0J9YX94 578 aa12.56□□□□□ -0.4
HDAC6-211ENST00000443563 GOLGA8AA7E2F4 631 aa12.56□□□□□ -0.4
HDAC6-211ENST00000443563 GOLGA8BA8MQT2 603 aa12.56□□□□□ -0.4
HDAC6-211ENST00000443563 SEC24BO95487 1268 aa12.56□□□□□ -0.4
HDAC6-211ENST00000443563 PGK2P07205 417 aa12.56□□□□□ -0.4
HDAC6-211ENST00000443563 PRKAR2AP13861 404 aaKnown RBP12.56□□□□□ -0.4
HDAC6-211ENST00000443563 METAP2P50579 478 aaKnown RBP eCLIP12.56□□□□□ -0.4
HDAC6-211ENST00000443563 MUM1L1Q5H9M0 696 aa12.56□□□□□ -0.4
HDAC6-211ENST00000443563 MAP3K21Q5TCX8 1036 aa12.56□□□□□ -0.4
HDAC6-211ENST00000443563 IFFO2Q5TF58 517 aa12.56□□□□□ -0.4
HDAC6-211ENST00000443563 NSMFQ6X4W1 530 aa12.56□□□□□ -0.4
HDAC6-211ENST00000443563 HOMER1Q86YM7 354 aa12.56□□□□□ -0.4
HDAC6-211ENST00000443563 CCDC144CPQ8IYA2 1237 aa12.56□□□□□ -0.4
HDAC6-211ENST00000443563 SAMD3Q8N6K7 520 aa12.56□□□□□ -0.4
HDAC6-211ENST00000443563 IL17RAQ96F46 866 aa12.56□□□□□ -0.4
HDAC6-211ENST00000443563 RNF208Q9H0X6 261 aa12.56□□□□□ -0.4
HDAC6-211ENST00000443563 A1CFQ9NQ94 594 aaKnown RBP12.56□□□□□ -0.4
HDAC6-211ENST00000443563 CYP39A1Q9NYL5 469 aa12.56□□□□□ -0.4
HDAC6-211ENST00000443563 NRBP1Q9UHY1 535 aa12.56□□□□□ -0.4
HDAC6-211ENST00000443563 BRPF3Q9ULD4 1205 aa12.56□□□□□ -0.4
HDAC6-211ENST00000443563 SMCHD1A6NHR9 2005 aa12.55□□□□□ -0.4
HDAC6-211ENST00000443563 LOC102724159A0A0B4J2E5 919 aa12.55□□□□□ -0.4
HDAC6-211ENST00000443563 PTPDC1A2A3K4 754 aa12.55□□□□□ -0.4
HDAC6-211ENST00000443563 CAPN15O75808 1086 aa12.55□□□□□ -0.4
HDAC6-211ENST00000443563 RXRAP19793 462 aa12.55□□□□□ -0.4
HDAC6-211ENST00000443563 CACNB2Q08289 660 aaPredicted RBP12.55□□□□□ -0.4
HDAC6-211ENST00000443563 APOBRQ0VD83 1088 aa12.55□□□□□ -0.4
HDAC6-211ENST00000443563 PWP2Q15269 919 aaKnown RBP12.55□□□□□ -0.4
HDAC6-211ENST00000443563 ANKRD1Q15327 319 aa12.55□□□□□ -0.4
HDAC6-211ENST00000443563 MTFR1Q15390 333 aa12.55□□□□□ -0.4
HDAC6-211ENST00000443563 RNF207Q6ZRF8 634 aa12.55□□□□□ -0.4
HDAC6-211ENST00000443563 TMTC3Q6ZXV5 915 aa12.55□□□□□ -0.4
HDAC6-211ENST00000443563 PIGSQ96S52 555 aa12.55□□□□□ -0.4
HDAC6-211ENST00000443563 MPHOSPH6Q99547 160 aaKnown RBP12.55□□□□□ -0.4
HDAC6-211ENST00000443563 TINF2Q9BSI4 451 aa12.55□□□□□ -0.4
HDAC6-211ENST00000443563 ALDH8A1Q9H2A2 487 aaPredicted RBP12.55□□□□□ -0.4
HDAC6-211ENST00000443563 PDRG1Q9NUG6 133 aa12.55□□□□□ -0.4
HDAC6-211ENST00000443563 MAP3K20Q9NYL2 800 aaKnown RBP12.55□□□□□ -0.4
HDAC6-211ENST00000443563 FLRT1Q9NZU1 646 aa12.55□□□□□ -0.4
HDAC6-211ENST00000443563 ADD3Q9UEY8 706 aaKnown RBP12.55□□□□□ -0.4
HDAC6-211ENST00000443563 PCDHA1Q9Y5I3 950 aa12.55□□□□□ -0.4
HDAC6-211ENST00000443563 SYNGAP1Q96PV0 1343 aa12.55□□□□□ -0.4
HDAC6-211ENST00000443563 NID2Q14112 1375 aa12.55□□□□□ -0.4
HDAC6-211ENST00000443563 ASB14A6NK59 587 aa12.54□□□□□ -0.4
HDAC6-211ENST00000443563 B4DLN1 442 aa12.54□□□□□ -0.4
HDAC6-211ENST00000443563 NFIBO00712 420 aa12.54□□□□□ -0.4
HDAC6-211ENST00000443563 CYTH3O43739 400 aa12.54□□□□□ -0.4
HDAC6-211ENST00000443563 MSCO60682 206 aa12.54□□□□□ -0.4
HDAC6-211ENST00000443563 PLEKHA8P1O95397 391 aa12.54□□□□□ -0.4
HDAC6-211ENST00000443563 MYCP01106 439 aaPredicted RBP12.54□□□□□ -0.4
HDAC6-211ENST00000443563 IGHA2P01877 340 aa12.54□□□□□ -0.4
HDAC6-211ENST00000443563 GJB1P08034 283 aa12.54□□□□□ -0.4
HDAC6-211ENST00000443563 MRPL12P52815 198 aaKnown RBP12.54□□□□□ -0.4
HDAC6-211ENST00000443563 EVCP57679 992 aa12.54□□□□□ -0.4
HDAC6-211ENST00000443563 MAMDC4Q6UXC1 1216 aa12.54□□□□□ -0.4
HDAC6-211ENST00000443563 SRBD1Q8N5C6 995 aaKnown RBP12.54□□□□□ -0.4
HDAC6-211ENST00000443563 FAM133AQ8N9E0 248 aa12.54□□□□□ -0.4
HDAC6-211ENST00000443563 CLEC4DQ8WXI8 215 aa12.54□□□□□ -0.4
HDAC6-211ENST00000443563 ZNF274Q96GC6 653 aaPredicted RBP12.54□□□□□ -0.4
HDAC6-211ENST00000443563 UPF3BQ9BZI7 483 aaKnown RBP12.54□□□□□ -0.4
HDAC6-211ENST00000443563 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.54□□□□□ -0.4
HDAC6-211ENST00000443563 UNC93B1Q9H1C4 597 aa12.54□□□□□ -0.4
HDAC6-211ENST00000443563 PAK6Q9NQU5 681 aaPredicted RBP12.54□□□□□ -0.4
HDAC6-211ENST00000443563 CNPY2Q9Y2B0 182 aa12.54□□□□□ -0.4
HDAC6-211ENST00000443563 BAZ2BQ9UIF8 2168 aaKnown RBP12.53□□□□□ -0.4
HDAC6-211ENST00000443563 CYP2C19P33261 490 aa12.53□□□□□ -0.4
HDAC6-211ENST00000443563 SOX10P56693 466 aa12.53□□□□□ -0.4
HDAC6-211ENST00000443563 TRIM32Q13049 653 aa12.53□□□□□ -0.4
HDAC6-211ENST00000443563 BAATQ14032 418 aaPredicted RBP12.53□□□□□ -0.4
HDAC6-211ENST00000443563 TOB2Q14106 344 aaPredicted RBP12.53□□□□□ -0.4
HDAC6-211ENST00000443563 RAB11FIP4Q86YS3 637 aa12.53□□□□□ -0.4
HDAC6-211ENST00000443563 DNERQ8NFT8 737 aa12.53□□□□□ -0.4
HDAC6-211ENST00000443563 RBM27Q9P2N5 1060 aaKnown RBP12.53□□□□□ -0.4
HDAC6-211ENST00000443563 LCTP09848 1927 aa12.52□□□□□ -0.4
HDAC6-211ENST00000443563 hCG_1984214I3L0E3 225 aa12.52□□□□□ -0.41
HDAC6-211ENST00000443563 SGPL1O95470 568 aa12.52□□□□□ -0.41
HDAC6-211ENST00000443563 CYBAP13498 195 aa12.52□□□□□ -0.41
HDAC6-211ENST00000443563 CALML3P27482 149 aa12.52□□□□□ -0.41
HDAC6-211ENST00000443563 CNGA1P29973 690 aa12.52□□□□□ -0.41
HDAC6-211ENST00000443563 GJA8P48165 433 aa12.52□□□□□ -0.41
HDAC6-211ENST00000443563 RPS6P62753 249 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms