RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 CPVLQ9H3G5 476 aa11.45□□□□□ -0.58
HDAC6-207ENST00000430858 ABHD16BQ9H3Z7 469 aa11.45□□□□□ -0.58
HDAC6-207ENST00000430858 XPNPEP3Q9NQH7 507 aa11.45□□□□□ -0.58
HDAC6-207ENST00000430858 ZHX1Q9UKY1 873 aaPredicted RBP11.45□□□□□ -0.58
HDAC6-207ENST00000430858 FAM184BQ9ULE4 1060 aa11.45□□□□□ -0.58
HDAC6-207ENST00000430858 LOC102724159A0A0B4J2E5 919 aa11.44□□□□□ -0.58
HDAC6-207ENST00000430858 PALM3A6NDB9 673 aaPredicted RBP11.44□□□□□ -0.58
HDAC6-207ENST00000430858 SOWAHBA6NEL2 793 aa11.44□□□□□ -0.58
HDAC6-207ENST00000430858 KBTBD13C9JR72 458 aa11.44□□□□□ -0.58
HDAC6-207ENST00000430858 KLRF2D3W0D1 207 aa11.44□□□□□ -0.58
HDAC6-207ENST00000430858 H0YGN5 161 aa11.44□□□□□ -0.58
HDAC6-207ENST00000430858 NFIBO00712 420 aa11.44□□□□□ -0.58
HDAC6-207ENST00000430858 PRC1O43663 620 aa11.44□□□□□ -0.58
HDAC6-207ENST00000430858 DHX16O60231 1041 aaKnown RBP11.44□□□□□ -0.58
HDAC6-207ENST00000430858 MCM5P33992 734 aa11.44□□□□□ -0.58
HDAC6-207ENST00000430858 TROAPQ12815 778 aa11.44□□□□□ -0.58
HDAC6-207ENST00000430858 BAATQ14032 418 aaPredicted RBP11.44□□□□□ -0.58
HDAC6-207ENST00000430858 GRM4Q14833 912 aa11.44□□□□□ -0.58
HDAC6-207ENST00000430858 PWP2Q15269 919 aaKnown RBP11.44□□□□□ -0.58
HDAC6-207ENST00000430858 GJC2Q5T442 439 aaPredicted RBP11.44□□□□□ -0.58
HDAC6-207ENST00000430858 RNF207Q6ZRF8 634 aa11.44□□□□□ -0.58
HDAC6-207ENST00000430858 CATIPQ7Z7H3 387 aa11.44□□□□□ -0.58
HDAC6-207ENST00000430858 TMTC2Q8N394 836 aa11.44□□□□□ -0.58
HDAC6-207ENST00000430858 STAG2Q8N3U4 1231 aa11.44□□□□□ -0.58
HDAC6-207ENST00000430858 RGS22Q8NE09 1264 aa11.44□□□□□ -0.58
HDAC6-207ENST00000430858 TMEM87BQ96K49 555 aa11.44□□□□□ -0.58
HDAC6-207ENST00000430858 JMJD4Q9H9V9 463 aa11.44□□□□□ -0.58
HDAC6-207ENST00000430858 ADD3Q9UEY8 706 aaKnown RBP11.44□□□□□ -0.58
HDAC6-207ENST00000430858 MAD2L2Q9UI95 211 aa11.44□□□□□ -0.58
HDAC6-207ENST00000430858 ZNFX1Q9P2E3 1918 aaKnown RBP11.44□□□□□ -0.58
HDAC6-207ENST00000430858 TNRC18O15417 2968 aaPredicted RBP11.43□□□□□ -0.58
HDAC6-207ENST00000430858 ABCB11O95342 1321 aa11.43□□□□□ -0.58
HDAC6-207ENST00000430858 PTPDC1A2A3K4 754 aa11.43□□□□□ -0.58
HDAC6-207ENST00000430858 LRRC41Q15345 812 aa11.43□□□□□ -0.58
HDAC6-207ENST00000430858 QRICH1Q2TAL8 776 aa11.43□□□□□ -0.58
HDAC6-207ENST00000430858 TSGA10IPQ3SY00 556 aa11.43□□□□□ -0.58
HDAC6-207ENST00000430858 USH1GQ495M9 461 aa11.43□□□□□ -0.58
HDAC6-207ENST00000430858 RNF180Q86T96 592 aa11.43□□□□□ -0.58
HDAC6-207ENST00000430858 FBXO11Q86XK2 927 aa11.43□□□□□ -0.58
HDAC6-207ENST00000430858 MORC4Q8TE76 937 aa11.43□□□□□ -0.58
HDAC6-207ENST00000430858 MAP3K14Q99558 947 aa11.43□□□□□ -0.58
HDAC6-207ENST00000430858 SENP6Q9GZR1 1112 aaPredicted RBP11.43□□□□□ -0.58
HDAC6-207ENST00000430858 LY9Q9HBG7 655 aa11.43□□□□□ -0.58
HDAC6-207ENST00000430858 SENP2Q9HC62 589 aa11.43□□□□□ -0.58
HDAC6-207ENST00000430858 VAT1LQ9HCJ6 419 aa11.43□□□□□ -0.58
HDAC6-207ENST00000430858 ASTN1O14525 1302 aa11.42□□□□□ -0.58
HDAC6-207ENST00000430858 SH2B2O14492 632 aaPredicted RBP11.42□□□□□ -0.58
HDAC6-207ENST00000430858 ZBTB5O15062 677 aa11.42□□□□□ -0.58
HDAC6-207ENST00000430858 DUSP11O75319 330 aaKnown RBP11.42□□□□□ -0.58
HDAC6-207ENST00000430858 DDAH1O94760 285 aa11.42□□□□□ -0.58
HDAC6-207ENST00000430858 PGK1P00558 417 aa11.42□□□□□ -0.58
HDAC6-207ENST00000430858 MYCNP04198 464 aaPredicted RBP11.42□□□□□ -0.58
HDAC6-207ENST00000430858 CALML3P27482 149 aa11.42□□□□□ -0.58
HDAC6-207ENST00000430858 LIFRP42702 1097 aa11.42□□□□□ -0.58
HDAC6-207ENST00000430858 ALDH5A1P51649 535 aaPredicted RBP11.42□□□□□ -0.58
HDAC6-207ENST00000430858 RPS6P62753 249 aaKnown RBP11.42□□□□□ -0.58
HDAC6-207ENST00000430858 KRT32Q14532 448 aa11.42□□□□□ -0.58
HDAC6-207ENST00000430858 CCDC144BQ3MJ40 725 aa11.42□□□□□ -0.58
HDAC6-207ENST00000430858 SLC30A10Q6XR72 485 aa11.42□□□□□ -0.58
HDAC6-207ENST00000430858 MCF2L2Q86YR7 1114 aa11.42□□□□□ -0.58
HDAC6-207ENST00000430858 DNERQ8NFT8 737 aa11.42□□□□□ -0.58
HDAC6-207ENST00000430858 MTMR8Q96EF0 704 aa11.42□□□□□ -0.58
HDAC6-207ENST00000430858 NEK1Q96PY6 1258 aa11.42□□□□□ -0.58
HDAC6-207ENST00000430858 MPHOSPH6Q99547 160 aaKnown RBP11.42□□□□□ -0.58
HDAC6-207ENST00000430858 AMNQ9BXJ7 453 aa11.42□□□□□ -0.58
HDAC6-207ENST00000430858 KATNBL1Q9H079 304 aa11.42□□□□□ -0.58
HDAC6-207ENST00000430858 RIOX1Q9H6W3 641 aa11.42□□□□□ -0.58
HDAC6-207ENST00000430858 MRPL11Q9Y3B7 192 aaKnown RBP11.42□□□□□ -0.58
HDAC6-207ENST00000430858 PLXNA1Q9UIW2 1896 aa11.42□□□□□ -0.58
HDAC6-207ENST00000430858 CCDC69A6NI79 296 aa11.41□□□□□ -0.58
HDAC6-207ENST00000430858 ADAMTS4O75173 837 aa11.41□□□□□ -0.58
HDAC6-207ENST00000430858 REC8O95072 547 aa11.41□□□□□ -0.58
HDAC6-207ENST00000430858 KIF5BP33176 963 aa11.41□□□□□ -0.58
HDAC6-207ENST00000430858 TRAF1Q13077 416 aa11.41□□□□□ -0.58
HDAC6-207ENST00000430858 LRRC26Q2I0M4 334 aa11.41□□□□□ -0.58
HDAC6-207ENST00000430858 NFXL1Q6ZNB6 911 aa11.41□□□□□ -0.58
HDAC6-207ENST00000430858 C7orf61Q8IZ16 206 aa11.41□□□□□ -0.58
HDAC6-207ENST00000430858 ZNF654Q8IZM8 581 aa11.41□□□□□ -0.58
HDAC6-207ENST00000430858 CTCFLQ8NI51 663 aaPredicted RBP11.41□□□□□ -0.58
HDAC6-207ENST00000430858 NUP133Q8WUM0 1156 aa11.41□□□□□ -0.58
HDAC6-207ENST00000430858 PURBQ96QR8 312 aaKnown RBP11.41□□□□□ -0.58
HDAC6-207ENST00000430858 TSEN34Q9BSV6 310 aaKnown RBP11.41□□□□□ -0.58
HDAC6-207ENST00000430858 SPC25Q9HBM1 224 aa11.41□□□□□ -0.58
HDAC6-207ENST00000430858 VTA1Q9NP79 307 aa11.41□□□□□ -0.58
HDAC6-207ENST00000430858 PHF24Q9UPV7 400 aa11.41□□□□□ -0.58
HDAC6-207ENST00000430858 SYNRGQ9UMZ2 1314 aa11.4□□□□□ -0.58
HDAC6-207ENST00000430858 MOXD2PA6NHM9 499 aa11.4□□□□□ -0.58
HDAC6-207ENST00000430858 B4DLN1 442 aa11.4□□□□□ -0.58
HDAC6-207ENST00000430858 CYTH3O43739 400 aa11.4□□□□□ -0.58
HDAC6-207ENST00000430858 HMGB1P09429 215 aaKnown RBP11.4□□□□□ -0.58
HDAC6-207ENST00000430858 CALM1P0DP23 149 aa11.4□□□□□ -0.58
HDAC6-207ENST00000430858 CALM2P0DP24 149 aa11.4□□□□□ -0.58
HDAC6-207ENST00000430858 CALM3P0DP25 149 aa11.4□□□□□ -0.58
HDAC6-207ENST00000430858 CST5P28325 142 aaPredicted RBP11.4□□□□□ -0.58
HDAC6-207ENST00000430858 SMARCA1P28370 1054 aa11.4□□□□□ -0.58
HDAC6-207ENST00000430858 GNAQP50148 359 aa11.4□□□□□ -0.58
HDAC6-207ENST00000430858 MRPL12P52815 198 aaKnown RBP11.4□□□□□ -0.58
HDAC6-207ENST00000430858 ATN1P54259 1190 aaPredicted RBP11.4□□□□□ -0.58
HDAC6-207ENST00000430858 TNFAIP2Q03169 654 aa11.4□□□□□ -0.58
HDAC6-207ENST00000430858 IQSEC1Q6DN90 963 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms