RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 RabggtaQ9JHK4 567 aa10.49□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Gm43738A0A0G2JEA5 862 aa10.48□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Tcp10bE9PYJ0 438 aa10.48□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Gm5134E9QAB5 671 aa10.48□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Eef2P58252 858 aaKnown RBP10.48□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Gm5935Q497S0 212 aa10.48□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Tsga10Q6NY15 697 aa10.48□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Calcoco1Q8CGU1 691 aa10.48□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Grin3bQ91ZU9 1003 aa10.48□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Acsl3Q9CZW4 720 aaKnown RBP10.48□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Lrp2bpQ9D4C6 346 aa10.48□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Col20a1Q923P0 1320 aa10.48□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Gm7356A0A087WSA6 508 aa10.48□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Ncf1Q09014 390 aa10.48□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Dhx37Q6NZL1 1150 aa10.48□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Recql4Q75NR7 1216 aaKnown RBP10.48□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Dpp8Q80YA7 892 aa10.48□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Trim6Q8BGE7 488 aa10.48□□□□□ -0.73
Col6a1-201ENSMUST00000001147 HhatQ8BMT9 499 aa10.48□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Rcor2Q8C796 523 aa10.48□□□□□ -0.73
Col6a1-201ENSMUST00000001147 NenfQ9CQ45 171 aa10.48□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Mkrn1Q9QXP6 481 aa10.48□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Myo5bP21271 1818 aa10.48□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Rims2Q9EQZ7 1530 aa10.48□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Nme9A0A1L1SUL6 329 aa10.48□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Cetn3O35648 167 aa10.48□□□□□ -0.73
Col6a1-201ENSMUST00000001147 RaraP11416 462 aa10.48□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Aak1Q3UHJ0 959 aa10.48□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Arid3aQ62431 601 aa10.48□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Tmem134Q8R0J4 195 aa10.48□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Sirt2Q8VDQ8 389 aa10.48□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Cul5Q9D5V5 780 aa10.48□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Mroh9G5E8L9 891 aa10.48□□□□□ -0.73
Col6a1-201ENSMUST00000001147 GpiP06745 558 aaKnown RBP10.48□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Foxn3Q499D0 457 aa10.48□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Mars2Q499X9 586 aaKnown RBP10.48□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Iqcb1Q8BP00 598 aa10.48□□□□□ -0.73
Col6a1-201ENSMUST00000001147 SarnpQ9D1J3 210 aaKnown RBP10.48□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Rcan1Q9JHG6 198 aa10.48□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Tmem47Q9JJG6 181 aa10.48□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Tob2Q9JM55 345 aa10.48□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Tex13cD3YU32 604 aa10.47□□□□□ -0.73
Col6a1-201ENSMUST00000001147 DnttP09838 530 aa10.47□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Tnnc1P19123 161 aa10.47□□□□□ -0.73
Col6a1-201ENSMUST00000001147 VimP20152 466 aaKnown RBP10.47□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Mnat1P51949 309 aa10.47□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Scg2Q03517 617 aa10.47□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Trip13Q3UA06 432 aa10.47□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Nop53Q8BK35 484 aaKnown RBP10.47□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Phf20l1Q8CCJ9 1013 aa10.47□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Spata2Q8K004 515 aa10.47□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Ppp2r5dQ91V89 594 aa10.47□□□□□ -0.73
Col6a1-201ENSMUST00000001147 St5Q924W7 1134 aa10.47□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Ribc1Q9D0B8 379 aa10.47□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Rwdd2aQ9D9S3 292 aa10.47□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Ano9P86044 747 aa10.47□□□□□ -0.73
Col6a1-201ENSMUST00000001147 MaeaQ4VC33 396 aa10.47□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Ift20Q61025 132 aa10.47□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Haus1Q8BHX1 278 aa10.47□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Gga3Q8BMI3 718 aa10.47□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Csgalnact2Q8C1F4 542 aa10.47□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Tmem60Q8K174 133 aa10.47□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Q8K2W9 541 aa10.47□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Txndc5Q91W90 417 aa10.47□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Creb3l3Q91XE9 479 aa10.47□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Ndufv1Q91YT0 464 aa10.47□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Lzts2Q91YU6 671 aa10.47□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Ndst4Q9EQW8 872 aa10.47□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Proca1B0QZF7 307 aa10.47□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Ap1g2O88512 791 aa10.47□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Kif22Q3V300 660 aa10.47□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Cplx4Q80WM3 160 aa10.47□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Kctd3Q8BFX3 815 aa10.47□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Ces1Q8VCC2 565 aa10.47□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Robo1O89026 1612 aa10.46□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Psmc2P46471 433 aa10.46□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Opa1P58281 960 aa10.46□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Tax1bp1Q3UKC1 814 aaKnown RBP10.46□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Large2Q5XPT3 690 aa10.46□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Ccna1Q61456 421 aa10.46□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Ctnna3Q65CL1 895 aa10.46□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Smarca1Q6PGB8 1046 aa10.46□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Eid1Q9DCR4 169 aa10.46□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Myo1cQ9WTI7 1063 aa10.46□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Gdf11Q9Z1W4 405 aa10.46□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Prdm2A2A7B5 1709 aaKnown RBP10.46□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Scgb2b18A0A087WPA9 112 aa10.46□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Fam178bQ24JP3 464 aa10.46□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Slc9a2Q3ZAS0 814 aa10.46□□□□□ -0.74
Col6a1-201ENSMUST00000001147 NntQ61941 1086 aaKnown RBP10.46□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Ddx3yQ62095 658 aaKnown RBP10.46□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Ccdc189Q6NZQ0 333 aa10.46□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Rassf2Q8BMS9 326 aa10.46□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Scyl2Q8CFE4 930 aa10.46□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Arfgap2Q99K28 520 aa10.46□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Ctnnbl1Q9CWL8 563 aaKnown RBP10.46□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Mis12Q9CY25 206 aa10.46□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Cd2apQ9JLQ0 637 aa10.46□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Shank2Q80Z38 1476 aa10.46□□□□□ -0.74
Col6a1-201ENSMUST00000001147 1700017N19RikA0A087WPJ1 469 aa10.46□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 26.6 ms