RNA–Protein interactions for RNA: YPL193W

RSA1, Transcript of Protein involved in the assembly of 60S ribosomal subunits, yeast

Gene RSA1, Length 1,146 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA1	YPL193W	SIR1	P21691	654 aa		2.93	□□□□□ -1.94
RSA1	YPL193W	LRE1	P25579	583 aa	Known RBP	2.93	□□□□□ -1.94
RSA1	YPL193W	LHS1	P36016	881 aa		2.93	□□□□□ -1.94
RSA1	YPL193W	MIC60	P36112	540 aa		2.93	□□□□□ -1.94
RSA1	YPL193W	YIL060W	P40519	144 aa		2.93	□□□□□ -1.94
RSA1	YPL193W	SRP54	P20424	541 aa	Known RBP	2.92	□□□□□ -1.94
RSA1	YPL193W	YDL186W	P48568	277 aa		2.92	□□□□□ -1.94
RSA1	YPL193W	NUP100	Q02629	959 aa		2.92	□□□□□ -1.94
RSA1	YPL193W	NUM1	Q00402	2748 aa		2.91	□□□□□ -1.94
RSA1	YPL193W	MSM1	P22438	575 aa		2.91	□□□□□ -1.94
RSA1	YPL193W	MCM3	P24279	971 aa	Known RBP	2.91	□□□□□ -1.94
RSA1	YPL193W	CLB2	P24869	491 aa		2.91	□□□□□ -1.94
RSA1	YPL193W	RPS2	P25443	254 aa	Known RBP	2.91	□□□□□ -1.94
RSA1	YPL193W	ATS1	P31386	333 aa		2.91	□□□□□ -1.94
RSA1	YPL193W	ARP2	P32381	391 aa	Known RBP	2.91	□□□□□ -1.94
RSA1	YPL193W	LOS1	P33418	1100 aa	Predicted RBP	2.91	□□□□□ -1.94
RSA1	YPL193W	MRX1	P40050	688 aa		2.91	□□□□□ -1.94
RSA1	YPL193W	GUF1	P46943	645 aa		2.91	□□□□□ -1.94
RSA1	YPL193W	CTK2	P46962	323 aa		2.91	□□□□□ -1.94
RSA1	YPL193W	SUB1	P54000	292 aa	Known RBP	2.91	□□□□□ -1.94
RSA1	YPL193W	TRM44	Q02648	567 aa	Known RBP	2.91	□□□□□ -1.94
RSA1	YPL193W	AUS1	Q08409	1394 aa		2.9	□□□□□ -1.94
RSA1	YPL193W	YJL213W	P40896	331 aa		2.9	□□□□□ -1.95
RSA1	YPL193W	IKS1	P47042	667 aa		2.9	□□□□□ -1.95
RSA1	YPL193W	VPS4	P52917	437 aa		2.9	□□□□□ -1.95
RSA1	YPL193W	TDA7	P53882	636 aa	Predicted RBP	2.9	□□□□□ -1.95
RSA1	YPL193W	HIM1	Q06674	414 aa		2.9	□□□□□ -1.95
RSA1	YPL193W	SWT1	Q12104	458 aa		2.9	□□□□□ -1.95
RSA1	YPL193W	GRX6	Q12438	231 aa		2.9	□□□□□ -1.95
RSA1	YPL193W	RPL15A	P05748	204 aa	Known RBP	2.89	□□□□□ -1.95
RSA1	YPL193W	HPR1	P17629	752 aa	Known RBP	2.89	□□□□□ -1.95
RSA1	YPL193W	LSB5	P25369	354 aa		2.89	□□□□□ -1.95
RSA1	YPL193W	SOF1	P33750	489 aa	Known RBP	2.89	□□□□□ -1.95
RSA1	YPL193W	RRP3	P38712	501 aa	Known RBP	2.89	□□□□□ -1.95
RSA1	YPL193W	YGL082W	P53155	381 aa		2.89	□□□□□ -1.95
RSA1	YPL193W	YGR117C	P53270	476 aa		2.89	□□□□□ -1.95
RSA1	YPL193W	CRN1	Q06440	651 aa		2.89	□□□□□ -1.95
RSA1	YPL193W	IWR1	Q07532	353 aa	Predicted RBP	2.89	□□□□□ -1.95
RSA1	YPL193W	FMP45	Q07651	309 aa		2.89	□□□□□ -1.95
RSA1	YPL193W	KRS1	P15180	591 aa	Known RBP	2.88	□□□□□ -1.95
RSA1	YPL193W	HSP104	P31539	908 aa	Known RBP	2.88	□□□□□ -1.95
RSA1	YPL193W	YER130C	P39959	443 aa		2.88	□□□□□ -1.95
RSA1	YPL193W	RGI2	P40188	164 aa		2.88	□□□□□ -1.95
RSA1	YPL193W	YFR016C	P43597	1233 aa	Known RBP	2.88	□□□□□ -1.95
RSA1	YPL193W	PKP2	P53170	491 aa		2.88	□□□□□ -1.95
RSA1	YPL193W	VPS72	Q03388	795 aa		2.88	□□□□□ -1.95
RSA1	YPL193W	TAO3	P40468	2376 aa		2.87	□□□□□ -1.95
RSA1	YPL193W	MCK1	P21965	375 aa	Known RBP	2.87	□□□□□ -1.95
RSA1	YPL193W	MCM4	P30665	933 aa	Known RBP	2.87	□□□□□ -1.95
RSA1	YPL193W	APE3	P37302	537 aa	Known RBP	2.87	□□□□□ -1.95
RSA1	YPL193W	RPH1	P39956	796 aa		2.87	□□□□□ -1.95
RSA1	YPL193W	FAF1	P40546	346 aa	Predicted RBP	2.87	□□□□□ -1.95
RSA1	YPL193W	ERR3	P42222	437 aa		2.87	□□□□□ -1.95
RSA1	YPL193W	YJL132W	P47014	750 aa		2.87	□□□□□ -1.95
RSA1	YPL193W	TAN1	P53072	289 aa	Predicted RBP	2.87	□□□□□ -1.95
RSA1	YPL193W	RTS3	P53289	263 aa		2.87	□□□□□ -1.95
RSA1	YPL193W	RBG2	P53295	368 aa	Known RBP	2.87	□□□□□ -1.95
RSA1	YPL193W	APJ1	P53940	528 aa		2.87	□□□□□ -1.95
RSA1	YPL193W	RMT2	Q03305	412 aa		2.87	□□□□□ -1.95
RSA1	YPL193W	YOL159C	Q08300	171 aa		2.87	□□□□□ -1.95
RSA1	YPL193W	SET6	Q12529	373 aa		2.87	□□□□□ -1.95
RSA1	YPL193W	GRX4	P32642	244 aa		2.86	□□□□□ -1.95
RSA1	YPL193W	PHD1	P36093	366 aa		2.86	□□□□□ -1.95
RSA1	YPL193W	ECM10	P39987	644 aa		2.86	□□□□□ -1.95
RSA1	YPL193W	YIL161W	P40449	235 aa	Known RBP	2.86	□□□□□ -1.95
RSA1	YPL193W	YFR020W	P43600	232 aa		2.86	□□□□□ -1.95
RSA1	YPL193W	DSD1	P53095	428 aa		2.86	□□□□□ -1.95
RSA1	YPL193W	RBA50	Q04418	439 aa		2.86	□□□□□ -1.95
RSA1	YPL193W	ALE1	Q08548	619 aa		2.86	□□□□□ -1.95
RSA1	YPL193W	YOL114C	Q12322	202 aa		2.86	□□□□□ -1.95
RSA1	YPL193W	MRC1	P25588	1096 aa		2.85	□□□□□ -1.95
RSA1	YPL193W	ACH1	P32316	526 aa		2.85	□□□□□ -1.95
RSA1	YPL193W	NTR2	P36118	322 aa	Predicted RBP	2.85	□□□□□ -1.95
RSA1	YPL193W	APM3	P38153	483 aa		2.85	□□□□□ -1.95
RSA1	YPL193W	PHO90	P39535	881 aa		2.85	□□□□□ -1.95
RSA1	YPL193W	YGL242C	P53066	181 aa		2.85	□□□□□ -1.95
RSA1	YPL193W	SYF1	Q04048	859 aa	Predicted RBP	2.85	□□□□□ -1.95
RSA1	YPL193W	DIB1	Q06819	143 aa	Predicted RBP	2.85	□□□□□ -1.95
RSA1	YPL193W	YEH2	Q07950	538 aa		2.85	□□□□□ -1.95
RSA1	YPL193W	LYS2	P07702	1392 aa		2.85	□□□□□ -1.95
RSA1	YPL193W	SWE1	P32944	819 aa		2.84	□□□□□ -1.95
RSA1	YPL193W	SPC34	P36131	295 aa		2.84	□□□□□ -1.95
RSA1	YPL193W	AAP1	P37898	856 aa	Known RBP	2.84	□□□□□ -1.95
RSA1	YPL193W	MTC6	P38849	526 aa		2.84	□□□□□ -1.95
RSA1	YPL193W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	2.84	□□□□□ -1.95	not detected
RSA1	YPL193W	PRE5	P40302	234 aa	Known RBP	2.84	□□□□□ -1.95
RSA1	YPL193W	SWP82	P43554	623 aa		2.84	□□□□□ -1.95
RSA1	YPL193W	RTT101	P47050	842 aa		2.84	□□□□□ -1.95
RSA1	YPL193W	RRT6	P53117	311 aa	Predicted RBP	2.84	□□□□□ -1.95
RSA1	YPL193W	NNF2	P53253	936 aa		2.84	□□□□□ -1.95
RSA1	YPL193W	MDG1	P53885	366 aa		2.84	□□□□□ -1.95
RSA1	YPL193W	TEP1	P53916	434 aa		2.84	□□□□□ -1.95
RSA1	YPL193W	MOT3	P54785	490 aa	Known RBP	2.84	□□□□□ -1.95
RSA1	YPL193W	RSM28	Q03430	361 aa		2.84	□□□□□ -1.95
RSA1	YPL193W	TAP42	Q04372	366 aa		2.84	□□□□□ -1.95
RSA1	YPL193W	RDR1	Q08904	546 aa		2.84	□□□□□ -1.95
RSA1	YPL193W	PAH1	P32567	862 aa		2.83	□□□□□ -1.96
RSA1	YPL193W	GEX2	P36173	615 aa		2.83	□□□□□ -1.96
RSA1	YPL193W	AGP2	P38090	596 aa		2.83	□□□□□ -1.96
RSA1	YPL193W	YBP1	P38315	674 aa		2.83	□□□□□ -1.96

Retrieved 100 of 5,963 RNA–protein pairs in 549 ms