RNA–Protein interactions for RNA: YPL176C

TRE1, Transcript of Transferrin receptor-like protein, yeast

Gene TRE1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRE1	YPL176C	ALG5	P40350	334 aa		4.6	□□□□□ -1.67
TRE1	YPL176C	DLD2	P46681	530 aa	Known RBP	4.6	□□□□□ -1.67
TRE1	YPL176C	SMC3	P47037	1230 aa		4.6	□□□□□ -1.67
TRE1	YPL176C	YGR066C	P53242	292 aa		4.6	□□□□□ -1.67
TRE1	YPL176C	ESBP6	P53918	673 aa		4.6	□□□□□ -1.67
TRE1	YPL176C	HDA1	P53973	706 aa		4.6	□□□□□ -1.67
TRE1	YPL176C	CLU1	Q03690	1277 aa	Known RBP	4.6	□□□□□ -1.67
TRE1	YPL176C	RPC11	Q04307	110 aa	Predicted RBP	4.6	□□□□□ -1.67
TRE1	YPL176C	RBS1	Q05672	457 aa	Known RBP	4.6	□□□□□ -1.67
TRE1	YPL176C	TMA16	Q08687	178 aa		4.6	□□□□□ -1.67
TRE1	YPL176C	SVS1	Q12254	260 aa		4.6	□□□□□ -1.67
TRE1	YPL176C	YDR061W	Q12298	539 aa		4.6	□□□□□ -1.67
TRE1	YPL176C	NBL1	Q3E7Y6	73 aa		4.6	□□□□□ -1.67
TRE1	YPL176C	SOD2	P00447	233 aa		4.59	□□□□□ -1.67
TRE1	YPL176C	RSR1	P13856	272 aa		4.59	□□□□□ -1.67
TRE1	YPL176C	SAM35	P14693	329 aa		4.59	□□□□□ -1.67
TRE1	YPL176C	SNF5	P18480	905 aa		4.59	□□□□□ -1.67
TRE1	YPL176C	MTC7	P32633	139 aa		4.59	□□□□□ -1.67
TRE1	YPL176C	LRG1	P35688	1017 aa		4.59	□□□□□ -1.67
TRE1	YPL176C	RSM22	P36056	628 aa		4.59	□□□□□ -1.67
TRE1	YPL176C	SFB3	P38810	929 aa		4.59	□□□□□ -1.67
TRE1	YPL176C	AKR1	P39010	764 aa		4.59	□□□□□ -1.67
TRE1	YPL176C	YER085C	P40058	173 aa		4.59	□□□□□ -1.67
TRE1	YPL176C	YTA12	P40341	825 aa		4.59	□□□□□ -1.67
TRE1	YPL176C	SHQ1	P40486	507 aa	Predicted RBP	4.59	□□□□□ -1.67
TRE1	YPL176C	ABM1	P47146	123 aa		4.59	□□□□□ -1.67
TRE1	YPL176C	YDL183C	P48569	320 aa		4.59	□□□□□ -1.67
TRE1	YPL176C	MRK1	P50873	501 aa		4.59	□□□□□ -1.67
TRE1	YPL176C	MIG2	P53035	382 aa		4.59	□□□□□ -1.67
TRE1	YPL176C	ATG21	Q02887	496 aa		4.59	□□□□□ -1.67
TRE1	YPL176C	RRP17	Q04031	235 aa	Predicted RBP	4.59	□□□□□ -1.67
TRE1	YPL176C	FUS2	Q05670	677 aa		4.59	□□□□□ -1.67
TRE1	YPL176C	ADY4	Q05955	493 aa		4.59	□□□□□ -1.67
TRE1	YPL176C	YLR455W	Q06188	304 aa		4.59	□□□□□ -1.67
TRE1	YPL176C	YLL007C	Q07799	665 aa		4.59	□□□□□ -1.67
TRE1	YPL176C	YPL272C	Q08984	517 aa		4.59	□□□□□ -1.67
TRE1	YPL176C	YOR022C	Q12204	715 aa		4.59	□□□□□ -1.67
TRE1	YPL176C	HOS1	Q12214	470 aa		4.59	□□□□□ -1.67
TRE1	YPL176C	YVC1	Q12324	675 aa		4.59	□□□□□ -1.67
TRE1	YPL176C	YPR053C	Q6Q5F3	151 aa		4.59	□□□□□ -1.67
TRE1	YPL176C	PAN1	P32521	1480 aa		4.59	□□□□□ -1.67
TRE1	YPL176C	UFD4	P33202	1483 aa		4.59	□□□□□ -1.67
TRE1	YPL176C	MRPL4	P36517	319 aa		4.58	□□□□□ -1.68
TRE1	YPL176C	YBR139W	P38109	508 aa		4.58	□□□□□ -1.68
TRE1	YPL176C	SLM4	P38247	162 aa		4.58	□□□□□ -1.68
TRE1	YPL176C	GDT1	P38301	280 aa	Predicted RBP	4.58	□□□□□ -1.68
TRE1	YPL176C	AFG3	P39925	761 aa		4.58	□□□□□ -1.68
TRE1	YPL176C	RPN3	P40016	523 aa	Known RBP	4.58	□□□□□ -1.68
TRE1	YPL176C	ELO3	P40319	345 aa		4.58	□□□□□ -1.68
TRE1	YPL176C	CEP3	P40969	608 aa		4.58	□□□□□ -1.68
TRE1	YPL176C	ECM27	P47144	725 aa		4.58	□□□□□ -1.68
TRE1	YPL176C	TOM22	P49334	152 aa		4.58	□□□□□ -1.68
TRE1	YPL176C	YGL185C	P53100	379 aa		4.58	□□□□□ -1.68
TRE1	YPL176C	COQ6	P53318	479 aa		4.58	□□□□□ -1.68
TRE1	YPL176C	RPN9	Q04062	393 aa	Known RBP	4.58	□□□□□ -1.68
TRE1	YPL176C	IVY1	Q04934	453 aa		4.58	□□□□□ -1.68
TRE1	YPL176C	VAC14	Q06708	880 aa		4.58	□□□□□ -1.68
TRE1	YPL176C	LYS21	Q12122	440 aa	Known RBP	4.58	□□□□□ -1.68
TRE1	YPL176C	SFG1	Q12507	346 aa		4.58	□□□□□ -1.68
TRE1	YPL176C	PRC1	P00729	532 aa		4.58	□□□□□ -1.68
TRE1	YPL176C	ATP2	P00830	511 aa	Known RBP	4.58	□□□□□ -1.68
TRE1	YPL176C	CBP1	P07252	654 aa		4.58	□□□□□ -1.68
TRE1	YPL176C	FAR1	P21268	830 aa		4.58	□□□□□ -1.68
TRE1	YPL176C	MSB1	P21339	1137 aa	Known RBP	4.58	□□□□□ -1.68
TRE1	YPL176C	HXT1	P32465	570 aa		4.58	□□□□□ -1.68
TRE1	YPL176C	CMC1	P36064	111 aa		4.58	□□□□□ -1.68
TRE1	YPL176C	KTR3	P38130	404 aa	Predicted RBP	4.58	□□□□□ -1.68
TRE1	YPL176C	MAL33	P38157	468 aa		4.58	□□□□□ -1.68
TRE1	YPL176C	PFF1	P38244	976 aa		4.58	□□□□□ -1.68
TRE1	YPL176C	ZRG8	P40021	1076 aa		4.58	□□□□□ -1.68
TRE1	YPL176C	GSM1	P42950	618 aa		4.58	□□□□□ -1.68
TRE1	YPL176C	FMS1	P50264	508 aa		4.58	□□□□□ -1.68
TRE1	YPL176C	YGR117C	P53270	476 aa		4.58	□□□□□ -1.68
TRE1	YPL176C	PET117	Q02771	107 aa		4.58	□□□□□ -1.68
TRE1	YPL176C	RLI1	Q03195	608 aa	Known RBP	4.58	□□□□□ -1.68
TRE1	YPL176C	YOL107W	Q12239	342 aa		4.58	□□□□□ -1.68
TRE1	YPL176C	NTO1	Q12311	748 aa		4.58	□□□□□ -1.68
TRE1	YPL176C	OSM1	P21375	501 aa	Known RBP	4.57	□□□□□ -1.68
TRE1	YPL176C	APA2	P22108	325 aa		4.57	□□□□□ -1.68
TRE1	YPL176C	SEC15	P22224	910 aa		4.57	□□□□□ -1.68
TRE1	YPL176C	RFA1	P22336	621 aa	Known RBP	4.57	□□□□□ -1.68
TRE1	YPL176C	ARO4	P32449	370 aa	Known RBP	4.57	□□□□□ -1.68
TRE1	YPL176C	ADE17	P38009	592 aa	Known RBP	4.57	□□□□□ -1.68
TRE1	YPL176C	POA1	P38218	177 aa		4.57	□□□□□ -1.68
TRE1	YPL176C	TDP1	P38319	544 aa		4.57	□□□□□ -1.68
TRE1	YPL176C	TAE1	P38340	232 aa		4.57	□□□□□ -1.68
TRE1	YPL176C	MIP6	P38760	659 aa	Known RBP	4.57	□□□□□ -1.68
TRE1	YPL176C	TAM41	P53230	385 aa		4.57	□□□□□ -1.68
TRE1	YPL176C	SIN3	P22579	1536 aa		4.57	□□□□□ -1.68
TRE1	YPL176C	YRF1-1	P0CX20	1796 aa		4.57	□□□□□ -1.68
TRE1	YPL176C	YRF1-5	P0CX21	1796 aa		4.57	□□□□□ -1.68
TRE1	YPL176C	YRF1-8	P0CX22	1796 aa		4.57	□□□□□ -1.68
TRE1	YPL176C	TEF1	P02994	458 aa	Known RBP	4.57	□□□□□ -1.68
TRE1	YPL176C	PET494	P07390	489 aa	Predicted RBP	4.57	□□□□□ -1.68
TRE1	YPL176C	SRV2	P17555	526 aa	Known RBP	4.57	□□□□□ -1.68
TRE1	YPL176C	YPK2	P18961	677 aa		4.57	□□□□□ -1.68
TRE1	YPL176C	GID7	P25569	745 aa		4.57	□□□□□ -1.68
TRE1	YPL176C	GEX1	P25596	615 aa		4.57	□□□□□ -1.68
TRE1	YPL176C	RDS1	P25611	832 aa		4.57	□□□□□ -1.68
TRE1	YPL176C	KES1	P35844	434 aa	Known RBP	4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms