RNA–Protein interactions for RNA: YOR078W

BUD21, Transcript of Component of small ribosomal subunit (SSU) processosome, yeastyeast

Gene BUD21, Length 645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD21YOR078W CDC31P06704 161 aaKnown RBP3.19□□□□□ -1.9
BUD21YOR078W ADE3P07245 946 aaKnown RBP3.19□□□□□ -1.9
BUD21YOR078W SSC1P0CS90 654 aaKnown RBP3.19□□□□□ -1.9
BUD21YOR078W ADH4P10127 382 aa3.19□□□□□ -1.9
BUD21YOR078W FRS2P15625 503 aaKnown RBP3.19□□□□□ -1.9
BUD21YOR078W SPE2P21182 396 aa3.19□□□□□ -1.9
BUD21YOR078W PDE1P22434 369 aa3.19□□□□□ -1.9
BUD21YOR078W NIP100P33420 868 aa3.19□□□□□ -1.9
BUD21YOR078W PRX1P34227 261 aaKnown RBP3.19□□□□□ -1.9
BUD21YOR078W PEX5P35056 612 aa3.19□□□□□ -1.9
BUD21YOR078W UBP13P38187 747 aa3.19□□□□□ -1.9
BUD21YOR078W FES1P38260 290 aa3.19□□□□□ -1.9
BUD21YOR078W SIP3P38717 1229 aa3.19□□□□□ -1.9
BUD21YOR078W SWD1P39706 426 aa3.19□□□□□ -1.9
BUD21YOR078W NOC2P39744 710 aaKnown RBP3.19□□□□□ -1.9
BUD21YOR078W KAP123P40069 1113 aaKnown RBP3.19□□□□□ -1.9
BUD21YOR078W GPD2P41911 440 aaKnown RBP3.19□□□□□ -1.9
BUD21YOR078W NIT2P47016 307 aa3.19□□□□□ -1.9
BUD21YOR078W GTR1Q00582 310 aa3.19□□□□□ -1.9
BUD21YOR078W CIK1Q01649 594 aa3.19□□□□□ -1.9
BUD21YOR078W YKR005CQ02203 525 aa3.19□□□□□ -1.9
BUD21YOR078W RIX7Q07844 837 aaKnown RBP3.19□□□□□ -1.9
BUD21YOR078W DAP1Q12091 152 aa3.19□□□□□ -1.9
BUD21YOR078W CDC25P04821 1589 aa3.19□□□□□ -1.9
BUD21YOR078W YBT1P32386 1661 aa3.19□□□□□ -1.9
BUD21YOR078W MDS3P53094 1487 aa3.18□□□□□ -1.9
BUD21YOR078W REP1P03871 373 aa3.18□□□□□ -1.9
BUD21YOR078W CTT1P06115 562 aa3.18□□□□□ -1.9
BUD21YOR078W CDC16P09798 840 aa3.18□□□□□ -1.9
BUD21YOR078W PDA1P16387 420 aaKnown RBP3.18□□□□□ -1.9
BUD21YOR078W SEN2P16658 377 aa3.18□□□□□ -1.9
BUD21YOR078W TPM1P17536 199 aaKnown RBP3.18□□□□□ -1.9
BUD21YOR078W COX11P19516 300 aaKnown RBP3.18□□□□□ -1.9
BUD21YOR078W PRD1P25375 712 aa3.18□□□□□ -1.9
BUD21YOR078W CDC15P27636 974 aa3.18□□□□□ -1.9
BUD21YOR078W PAP1P29468 568 aaKnown RBP3.18□□□□□ -1.9
BUD21YOR078W ITR2P30606 609 aa3.18□□□□□ -1.9
BUD21YOR078W RME1P32338 300 aaKnown RBP3.18□□□□□ -1.9
BUD21YOR078W CBF2P32504 956 aa3.18□□□□□ -1.9
BUD21YOR078W ARC19P33204 171 aaKnown RBP3.18□□□□□ -1.9
BUD21YOR078W MRPL40P36534 297 aa3.18□□□□□ -1.9
BUD21YOR078W PCH2P38126 564 aa3.18□□□□□ -1.9
BUD21YOR078W AVT5P38176 459 aa3.18□□□□□ -1.9
BUD21YOR078W YBR242WP38331 238 aa3.18□□□□□ -1.9
BUD21YOR078W LAM5P43560 674 aa3.18□□□□□ -1.9
BUD21YOR078W MIC19P43594 170 aa3.18□□□□□ -1.9
BUD21YOR078W SPC105P53148 917 aa3.18□□□□□ -1.9
BUD21YOR078W HOP2P53187 214 aa3.18□□□□□ -1.9
BUD21YOR078W YNL181WP53878 407 aa3.18□□□□□ -1.9
BUD21YOR078W HEF3P53978 1044 aaKnown RBP3.18□□□□□ -1.9
BUD21YOR078W ADD37Q03233 198 aa3.18□□□□□ -1.9
BUD21YOR078W RSM28Q03430 361 aa3.18□□□□□ -1.9
BUD21YOR078W HEL2Q05580 639 aaKnown RBP3.18□□□□□ -1.9
BUD21YOR078W YLH47Q06493 454 aa3.18□□□□□ -1.9
BUD21YOR078W MSH5Q12175 901 aa3.18□□□□□ -1.9
BUD21YOR078W OCA6Q12454 224 aa3.18□□□□□ -1.9
BUD21YOR078W NOT5Q12514 560 aaPredicted RBP3.18□□□□□ -1.9
BUD21YOR078W LSO2Q3E772 92 aaKnown RBP3.18□□□□□ -1.9
BUD21YOR078W ADE6P38972 1358 aaKnown RBP3.17□□□□□ -1.9
BUD21YOR078W MSM1P22438 575 aa3.17□□□□□ -1.9
BUD21YOR078W YCR016WP25617 290 aaKnown RBP3.17□□□□□ -1.9
BUD21YOR078W SSO1P32867 290 aa3.17□□□□□ -1.9
BUD21YOR078W CNS1P33313 385 aa3.17□□□□□ -1.9
BUD21YOR078W HES1P35843 434 aa3.17□□□□□ -1.9
BUD21YOR078W FZO1P38297 855 aa3.17□□□□□ -1.9
BUD21YOR078W YHB1P39676 399 aaKnown RBP3.17□□□□□ -1.9
BUD21YOR078W SCS2P40075 244 aaKnown RBP3.17□□□□□ -1.9
BUD21YOR078W PHB1P40961 287 aa3.17□□□□□ -1.9
BUD21YOR078W VTC2P43585 828 aa3.17□□□□□ -1.9
BUD21YOR078W KEL2P50090 882 aa3.17□□□□□ -1.9
BUD21YOR078W RRP46P53256 223 aaPredicted RBP3.17□□□□□ -1.9
BUD21YOR078W CAF130P53280 1122 aaPredicted RBP3.17□□□□□ -1.9
BUD21YOR078W ZPR1P53303 486 aaKnown RBP3.17□□□□□ -1.9
BUD21YOR078W YGR266WP53326 701 aa3.17□□□□□ -1.9
BUD21YOR078W VPS75P53853 264 aa3.17□□□□□ -1.9
BUD21YOR078W MEH1Q02205 184 aa3.17□□□□□ -1.9
BUD21YOR078W ADA2Q02336 434 aa3.17□□□□□ -1.9
BUD21YOR078W GIR2Q03768 265 aaPredicted RBP3.17□□□□□ -1.9
BUD21YOR078W SPC24Q04477 213 aa3.17□□□□□ -1.9
BUD21YOR078W TRI1Q05024 226 aa3.17□□□□□ -1.9
BUD21YOR078W SSQ1Q05931 657 aaPredicted RBP3.17□□□□□ -1.9
BUD21YOR078W SYO1Q07395 620 aa3.17□□□□□ -1.9
BUD21YOR078W PSK2Q08217 1101 aa3.17□□□□□ -1.9
BUD21YOR078W APC5Q08683 685 aa3.17□□□□□ -1.9
BUD21YOR078W CTI6Q08923 506 aa3.17□□□□□ -1.9
BUD21YOR078W APL4Q12028 832 aa3.17□□□□□ -1.9
BUD21YOR078W VIK1Q12045 647 aa3.17□□□□□ -1.9
BUD21YOR078W RIO1Q12196 484 aaKnown RBP3.17□□□□□ -1.9
BUD21YOR078W HTZ1Q12692 134 aaKnown RBP3.17□□□□□ -1.9
BUD21YOR078W DDP1Q99321 188 aaKnown RBP3.17□□□□□ -1.9
BUD21YOR078W LTE1P07866 1435 aa3.17□□□□□ -1.9
BUD21YOR078W PDR12Q02785 1511 aa3.16□□□□□ -1.9
BUD21YOR078W CDC8P00572 216 aa3.16□□□□□ -1.9
BUD21YOR078W HIS3P06633 220 aa3.16□□□□□ -1.9
BUD21YOR078W RSR1P13856 272 aa3.16□□□□□ -1.9
BUD21YOR078W PRO3P32263 286 aaKnown RBP3.16□□□□□ -1.9
BUD21YOR078W VPH2P32341 215 aa3.16□□□□□ -1.9
BUD21YOR078W BUD2P33314 1104 aa3.16□□□□□ -1.9
BUD21YOR078W SAS3P34218 831 aa3.16□□□□□ -1.9
BUD21YOR078W DBP7P36120 742 aaKnown RBP3.16□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms