RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W RTT109Q07794 436 aa2.72□□□□□ -1.97
PEP12YOR036W FMP40Q08968 688 aaPredicted RBP2.72□□□□□ -1.97
PEP12YOR036W GET3Q12154 354 aaKnown RBP2.72□□□□□ -1.97
PEP12YOR036W MF(ALPHA)1P01149 165 aa2.71□□□□□ -1.98
PEP12YOR036W MRP2P10663 115 aaPredicted RBP2.71□□□□□ -1.98
PEP12YOR036W KRS1P15180 591 aaKnown RBP2.71□□□□□ -1.98
PEP12YOR036W PDX1P16451 410 aa2.71□□□□□ -1.98
PEP12YOR036W PUP3P25451 205 aaKnown RBP2.71□□□□□ -1.98
PEP12YOR036W SSE2P32590 693 aaKnown RBP2.71□□□□□ -1.98
PEP12YOR036W UBP11P36026 717 aa2.71□□□□□ -1.98
PEP12YOR036W BYE1P36106 594 aa2.71□□□□□ -1.98
PEP12YOR036W CST26P38226 397 aa2.71□□□□□ -1.98
PEP12YOR036W MUM2P38236 366 aa2.71□□□□□ -1.98
PEP12YOR036W TOM71P38825 639 aaKnown RBP2.71□□□□□ -1.98
PEP12YOR036W SMF1P38925 575 aa2.71□□□□□ -1.98
PEP12YOR036W ERV46P39727 415 aa2.71□□□□□ -1.98
PEP12YOR036W BUR6P40096 142 aa2.71□□□□□ -1.98
PEP12YOR036W YIL169CP40442 995 aa2.71□□□□□ -1.98
PEP12YOR036W SGN1P40561 250 aaKnown RBP RIP-Chip data2.71□□□□□ -1.98not detected
PEP12YOR036W GPD2P41911 440 aaKnown RBP2.71□□□□□ -1.98
PEP12YOR036W FAR3P46671 204 aa2.71□□□□□ -1.98
PEP12YOR036W SMC3P47037 1230 aa2.71□□□□□ -1.98
PEP12YOR036W EAF7P53911 425 aaKnown RBP2.71□□□□□ -1.98
PEP12YOR036W MAK10Q02197 733 aa2.71□□□□□ -1.98
PEP12YOR036W VTC3Q02725 835 aa2.71□□□□□ -1.98
PEP12YOR036W FIN1Q03898 291 aa2.71□□□□□ -1.98
PEP12YOR036W PFA4Q12006 378 aa2.71□□□□□ -1.98
PEP12YOR036W CHO1P08456 276 aa2.7□□□□□ -1.98
PEP12YOR036W GPA1P08539 472 aa2.7□□□□□ -1.98
PEP12YOR036W YFL068WP0CX99 160 aa2.7□□□□□ -1.98
PEP12YOR036W YLL066W-AP0CY00 160 aa2.7□□□□□ -1.98
PEP12YOR036W YLL067W-AP0CY01 160 aa2.7□□□□□ -1.98
PEP12YOR036W CLB2P24869 491 aa2.7□□□□□ -1.98
PEP12YOR036W STE50P25344 346 aa2.7□□□□□ -1.98
PEP12YOR036W PRD1P25375 712 aa2.7□□□□□ -1.98
PEP12YOR036W SYN8P31377 255 aa2.7□□□□□ -1.98
PEP12YOR036W MRE11P32829 692 aa2.7□□□□□ -1.98
PEP12YOR036W WBP1P33767 430 aaKnown RBP2.7□□□□□ -1.98
PEP12YOR036W TCD2P36101 447 aaKnown RBP2.7□□□□□ -1.98
PEP12YOR036W NUP133P36161 1157 aa2.7□□□□□ -1.98
PEP12YOR036W VID24P38263 362 aa2.7□□□□□ -1.98
PEP12YOR036W ELO1P39540 310 aa2.7□□□□□ -1.98
PEP12YOR036W ORC5P50874 479 aa2.7□□□□□ -1.98
PEP12YOR036W YMR178WQ03219 274 aaKnown RBP2.7□□□□□ -1.98
PEP12YOR036W YMR155WQ03795 547 aa2.7□□□□□ -1.98
PEP12YOR036W YDR131CQ03899 556 aa2.7□□□□□ -1.98
PEP12YOR036W VPS38Q05919 439 aa2.7□□□□□ -1.98
PEP12YOR036W MRD1Q06106 887 aaKnown RBP2.7□□□□□ -1.98
PEP12YOR036W YOL159CQ08300 171 aa2.7□□□□□ -1.98
PEP12YOR036W RIM20Q12033 661 aa2.7□□□□□ -1.98
PEP12YOR036W LEU9Q12166 604 aaKnown RBP2.7□□□□□ -1.98
PEP12YOR036W AVL9Q12500 764 aa2.7□□□□□ -1.98
PEP12YOR036W RAP1P11938 827 aa2.69□□□□□ -1.98
PEP12YOR036W KGD1P20967 1014 aaKnown RBP2.69□□□□□ -1.98
PEP12YOR036W GPI10P30777 616 aa2.69□□□□□ -1.98
PEP12YOR036W SAC1P32368 623 aaKnown RBP2.69□□□□□ -1.98
PEP12YOR036W VMA8P32610 256 aaKnown RBP2.69□□□□□ -1.98
PEP12YOR036W SEC66P33754 206 aa2.69□□□□□ -1.98
PEP12YOR036W TIF3P34167 436 aaKnown RBP2.69□□□□□ -1.98
PEP12YOR036W YBR144CP34215 104 aa2.69□□□□□ -1.98
PEP12YOR036W SEF1P34228 1148 aa2.69□□□□□ -1.98
PEP12YOR036W OCT1P35999 772 aa2.69□□□□□ -1.98
PEP12YOR036W SCO2P38072 301 aa2.69□□□□□ -1.98
PEP12YOR036W TSC10P38342 320 aa2.69□□□□□ -1.98
PEP12YOR036W ARN1P38731 627 aa2.69□□□□□ -1.98
PEP12YOR036W PET130P47065 347 aa2.69□□□□□ -1.98
PEP12YOR036W YML6P51998 286 aa2.69□□□□□ -1.98
PEP12YOR036W TWF1P53250 332 aa2.69□□□□□ -1.98
PEP12YOR036W YGR127WP53275 312 aa2.69□□□□□ -1.98
PEP12YOR036W MDG1P53885 366 aa2.69□□□□□ -1.98
PEP12YOR036W RQC1Q05468 723 aaKnown RBP2.69□□□□□ -1.98
PEP12YOR036W ECM22Q05958 814 aaPredicted RBP2.69□□□□□ -1.98
PEP12YOR036W PIG1Q06216 648 aa2.69□□□□□ -1.98
PEP12YOR036W YOR389WQ08912 624 aa2.69□□□□□ -1.98
PEP12YOR036W ATG29Q12092 213 aa2.69□□□□□ -1.98
PEP12YOR036W SNU66Q12420 587 aaPredicted RBP2.69□□□□□ -1.98
PEP12YOR036W YOL159C-AQ3E769 90 aa2.69□□□□□ -1.98
PEP12YOR036W GAL80P04387 435 aa2.68□□□□□ -1.98
PEP12YOR036W ILS1P09436 1072 aaKnown RBP2.68□□□□□ -1.98
PEP12YOR036W HOM3P10869 527 aa2.68□□□□□ -1.98
PEP12YOR036W MRP13P12686 339 aa2.68□□□□□ -1.98
PEP12YOR036W EST1P17214 699 aaPredicted RBP2.68□□□□□ -1.98
PEP12YOR036W SPE2P21182 396 aa2.68□□□□□ -1.98
PEP12YOR036W IMG1P25626 169 aa2.68□□□□□ -1.98
PEP12YOR036W MSS51P32335 436 aa2.68□□□□□ -1.98
PEP12YOR036W YBL055CP34220 418 aaPredicted RBP2.68□□□□□ -1.98
PEP12YOR036W PEX5P35056 612 aa2.68□□□□□ -1.98
PEP12YOR036W MIA40P36046 403 aa2.68□□□□□ -1.98
PEP12YOR036W YBR139WP38109 508 aa2.68□□□□□ -1.98
PEP12YOR036W ARP1P38696 384 aa2.68□□□□□ -1.98
PEP12YOR036W ALG5P40350 334 aa2.68□□□□□ -1.98
PEP12YOR036W YJL107CP42947 387 aa2.68□□□□□ -1.98
PEP12YOR036W IMD4P50094 524 aaKnown RBP2.68□□□□□ -1.98
PEP12YOR036W RSC1P53236 928 aa2.68□□□□□ -1.98
PEP12YOR036W NNF2P53253 936 aa2.68□□□□□ -1.98
PEP12YOR036W PFA5Q03289 374 aa2.68□□□□□ -1.98
PEP12YOR036W RPC11Q04307 110 aaPredicted RBP2.68□□□□□ -1.98
PEP12YOR036W DPB4Q04603 196 aaKnown RBP2.68□□□□□ -1.98
PEP12YOR036W PDR8Q06149 701 aa2.68□□□□□ -1.98
PEP12YOR036W MCH4Q08268 501 aa2.68□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms