RNA–Protein interactions for RNA: YMR298W

LIP1, Transcript of Ceramide synthase subunit, yeastyeast

Gene LIP1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LIP1YMR298W PPN1Q04119 674 aa9.4□□□□□ -0.9
LIP1YMR298W LCB5Q06147 687 aaKnown RBP9.4□□□□□ -0.9
LIP1YMR298W CDA1Q06702 301 aa9.4□□□□□ -0.9
LIP1YMR298W YEH2Q07950 538 aa9.4□□□□□ -0.9
LIP1YMR298W PER33Q12144 273 aa9.4□□□□□ -0.9
LIP1YMR298W CMR1Q12510 522 aaKnown RBP9.4□□□□□ -0.9
LIP1YMR298W UBR1P19812 1950 aa9.39□□□□□ -0.91
LIP1YMR298W SEM1O94742 89 aa9.39□□□□□ -0.91
LIP1YMR298W RPL24AP04449 155 aaKnown RBP9.39□□□□□ -0.91
LIP1YMR298W ZIP1P31111 875 aa9.39□□□□□ -0.91
LIP1YMR298W PTC1P35182 281 aa9.39□□□□□ -0.91
LIP1YMR298W THI80P35202 319 aa9.39□□□□□ -0.91
LIP1YMR298W MPT5P39016 859 aaKnown RBP RIP-Chip data9.39□□□□□ -0.91not detected
LIP1YMR298W YEN1P40028 759 aa9.39□□□□□ -0.91
LIP1YMR298W DOT6P40059 670 aaKnown RBP9.39□□□□□ -0.91
LIP1YMR298W MAM33P40513 266 aa9.39□□□□□ -0.91
LIP1YMR298W DIM1P41819 318 aaKnown RBP9.39□□□□□ -0.91
LIP1YMR298W YRB1P41920 201 aaKnown RBP9.39□□□□□ -0.91
LIP1YMR298W GLG2P47011 380 aa9.39□□□□□ -0.91
LIP1YMR298W YJR154WP47181 346 aa9.39□□□□□ -0.91
LIP1YMR298W FLC3P53121 802 aa9.39□□□□□ -0.91
LIP1YMR298W COS6P53344 381 aa9.39□□□□□ -0.91
LIP1YMR298W PRO2P54885 456 aaKnown RBP9.39□□□□□ -0.91
LIP1YMR298W HMO1Q03973 246 aaKnown RBP9.39□□□□□ -0.91
LIP1YMR298W CIA1Q05583 330 aa9.39□□□□□ -0.91
LIP1YMR298W VAM6Q07468 1049 aa9.39□□□□□ -0.91
LIP1YMR298W IRC10Q08118 586 aa9.39□□□□□ -0.91
LIP1YMR298W BUD7Q08754 746 aa9.39□□□□□ -0.91
LIP1YMR298W MCH5Q08777 521 aa9.39□□□□□ -0.91
LIP1YMR298W FLC1Q08967 793 aa9.39□□□□□ -0.91
LIP1YMR298W MCD1Q12158 566 aa9.39□□□□□ -0.91
LIP1YMR298W YOR012WQ12351 137 aa9.39□□□□□ -0.91
LIP1YMR298W GTT2Q12390 233 aa9.39□□□□□ -0.91
LIP1YMR298W TRP3P00937 484 aa9.38□□□□□ -0.91
LIP1YMR298W APA1P16550 321 aaKnown RBP9.38□□□□□ -0.91
LIP1YMR298W UBA1P22515 1024 aaKnown RBP9.38□□□□□ -0.91
LIP1YMR298W SPS19P32573 292 aaKnown RBP9.38□□□□□ -0.91
LIP1YMR298W PRP18P33411 251 aaPredicted RBP9.38□□□□□ -0.91
LIP1YMR298W TIP20P33891 701 aa9.38□□□□□ -0.91
LIP1YMR298W YKL100CP34248 587 aa9.38□□□□□ -0.91
LIP1YMR298W LRG1P35688 1017 aa9.38□□□□□ -0.91
LIP1YMR298W LRP1P38801 184 aaKnown RBP9.38□□□□□ -0.91
LIP1YMR298W DHH1P39517 506 aaKnown RBP9.38□□□□□ -0.91
LIP1YMR298W IRR1P40541 1150 aa9.38□□□□□ -0.91
LIP1YMR298W ERG10P41338 398 aaKnown RBP9.38□□□□□ -0.91
LIP1YMR298W IMA1P53051 589 aa9.38□□□□□ -0.91
LIP1YMR298W VEL1P53058 206 aa9.38□□□□□ -0.91
LIP1YMR298W ARC35P53731 342 aaKnown RBP9.38□□□□□ -0.91
LIP1YMR298W YNR065CP53751 1116 aa9.38□□□□□ -0.91
LIP1YMR298W NPL3Q01560 414 aaKnown RBP RIP-Chip data9.38□□□□□ -0.91 RIP-Chip
LIP1YMR298W ATP25Q03153 612 aa9.38□□□□□ -0.91
LIP1YMR298W RIF2Q06208 395 aa9.38□□□□□ -0.91
LIP1YMR298W RSB1Q08417 382 aa9.38□□□□□ -0.91
LIP1YMR298W UPC2Q12151 913 aa9.38□□□□□ -0.91
LIP1YMR298W PDH1Q12428 516 aaKnown RBP9.38□□□□□ -0.91
LIP1YMR298W SAS5Q99314 248 aa9.38□□□□□ -0.91
LIP1YMR298W SAN1P22470 610 aa9.37□□□□□ -0.91
LIP1YMR298W PHO91P27514 894 aa9.37□□□□□ -0.91
LIP1YMR298W BRF1P29056 596 aa9.37□□□□□ -0.91
LIP1YMR298W SFP1P32432 683 aa9.37□□□□□ -0.91
LIP1YMR298W COX13P32799 129 aa9.37□□□□□ -0.91
LIP1YMR298W RPS1AP33442 255 aaKnown RBP9.37□□□□□ -0.91
LIP1YMR298W IRS4P36115 615 aaKnown RBP9.37□□□□□ -0.91
LIP1YMR298W YIL001WP40560 513 aa9.37□□□□□ -0.91
LIP1YMR298W VAC7P53950 1165 aa9.37□□□□□ -0.91
LIP1YMR298W PEX13P80667 386 aa9.37□□□□□ -0.91
LIP1YMR298W YMR178WQ03219 274 aaKnown RBP9.37□□□□□ -0.91
LIP1YMR298W SSL1Q04673 461 aaPredicted RBP9.37□□□□□ -0.91
LIP1YMR298W DYN3Q04949 312 aa9.37□□□□□ -0.91
LIP1YMR298W YLR413WQ06689 675 aa9.37□□□□□ -0.91
LIP1YMR298W UAF30Q08747 228 aa9.37□□□□□ -0.91
LIP1YMR298W GPB1Q08886 897 aa9.37□□□□□ -0.91
LIP1YMR298W YLR049CQ12110 428 aa9.37□□□□□ -0.91
LIP1YMR298W NSL1Q12143 216 aa9.37□□□□□ -0.91
LIP1YMR298W ATP2P00830 511 aaKnown RBP9.36□□□□□ -0.91
LIP1YMR298W COS2P0CX12 379 aa9.36□□□□□ -0.91
LIP1YMR298W COS3P0CX13 379 aa9.36□□□□□ -0.91
LIP1YMR298W MEF1P25039 761 aa9.36□□□□□ -0.91
LIP1YMR298W CSM1P25651 190 aa9.36□□□□□ -0.91
LIP1YMR298W ATP7P30902 174 aa9.36□□□□□ -0.91
LIP1YMR298W TFC1P32367 649 aa9.36□□□□□ -0.91
LIP1YMR298W SWE1P32944 819 aa9.36□□□□□ -0.91
LIP1YMR298W CSE1P33307 960 aa9.36□□□□□ -0.91
LIP1YMR298W FRE2P36033 711 aa9.36□□□□□ -0.91
LIP1YMR298W YBL029WP38201 376 aa9.36□□□□□ -0.91
LIP1YMR298W YER034WP40022 185 aaKnown RBP9.36□□□□□ -0.91
LIP1YMR298W MET18P40469 1032 aa9.36□□□□□ -0.91
LIP1YMR298W FKH2P41813 862 aa9.36□□□□□ -0.91
LIP1YMR298W OYE3P41816 400 aaPredicted RBP9.36□□□□□ -0.91
LIP1YMR298W COS4P43542 379 aa9.36□□□□□ -0.91
LIP1YMR298W SUM1P46676 1062 aa9.36□□□□□ -0.91
LIP1YMR298W YJR142WP47173 342 aa9.36□□□□□ -0.91
LIP1YMR298W NAS6P50086 228 aa9.36□□□□□ -0.91
LIP1YMR298W EMC4P53073 190 aa9.36□□□□□ -0.91
LIP1YMR298W YGR053CP53234 283 aa9.36□□□□□ -0.91
LIP1YMR298W FRE4P53746 719 aa9.36□□□□□ -0.91
LIP1YMR298W TRM12Q04235 462 aa9.36□□□□□ -0.91
LIP1YMR298W ATG26Q06321 1198 aa9.36□□□□□ -0.91
LIP1YMR298W GGA1Q06336 557 aa9.36□□□□□ -0.91
LIP1YMR298W PSR1Q07800 427 aa9.36□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms