RNA–Protein interactions for RNA: YKL010C

UFD4, Transcript of Ubiquitin-protein ligase (E3), yeastyeast

Gene UFD4, Length 4,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD4YKL010C YPL247CQ12523 523 aa2.14□□□□□ -2.07
UFD4YKL010C YOL159C-AQ3E769 90 aa2.14□□□□□ -2.07
UFD4YKL010C SAS5Q99314 248 aa2.14□□□□□ -2.07
UFD4YKL010C YOR338WQ99326 363 aa2.14□□□□□ -2.07
UFD4YKL010C COX5AP00424 153 aa2.14□□□□□ -2.07
UFD4YKL010C SSA4P22202 642 aaKnown RBP2.14□□□□□ -2.07
UFD4YKL010C YCL049CP25577 312 aa2.14□□□□□ -2.07
UFD4YKL010C CBF2P32504 956 aa2.14□□□□□ -2.07
UFD4YKL010C YHR218WP38899 603 aa2.14□□□□□ -2.07
UFD4YKL010C AVT2P39981 480 aa2.14□□□□□ -2.07
UFD4YKL010C ATM1P40416 690 aa2.14□□□□□ -2.07
UFD4YKL010C FAR3P46671 204 aa2.14□□□□□ -2.07
UFD4YKL010C COG1P53079 417 aa2.14□□□□□ -2.07
UFD4YKL010C UTP8P53276 713 aaKnown RBP2.14□□□□□ -2.07
UFD4YKL010C YNR014WP53719 212 aa2.14□□□□□ -2.07
UFD4YKL010C JIP5Q06214 492 aaPredicted RBP2.14□□□□□ -2.07
UFD4YKL010C MLH3Q12083 715 aa2.14□□□□□ -2.07
UFD4YKL010C TRM10Q12400 293 aa2.14□□□□□ -2.07
UFD4YKL010C HMG2P12684 1045 aa2.13□□□□□ -2.07
UFD4YKL010C REV1P12689 985 aa2.13□□□□□ -2.07
UFD4YKL010C GLN4P13188 809 aaKnown RBP2.13□□□□□ -2.07
UFD4YKL010C PMA2P19657 947 aa2.13□□□□□ -2.07
UFD4YKL010C SGF29P25554 259 aa2.13□□□□□ -2.07
UFD4YKL010C SPB1P25582 841 aaPredicted RBP2.13□□□□□ -2.07
UFD4YKL010C MRP21P38175 177 aa2.13□□□□□ -2.07
UFD4YKL010C YHL012WP38709 493 aa2.13□□□□□ -2.07
UFD4YKL010C RIM4P38741 713 aa2.13□□□□□ -2.07
UFD4YKL010C YEL028WP39989 153 aa2.13□□□□□ -2.07
UFD4YKL010C MET18P40469 1032 aa2.13□□□□□ -2.07
UFD4YKL010C CAB2P40506 365 aa2.13□□□□□ -2.07
UFD4YKL010C YFL052WP43551 465 aa2.13□□□□□ -2.07
UFD4YKL010C COG2P53271 262 aa2.13□□□□□ -2.07
UFD4YKL010C SPC98P53540 846 aa2.13□□□□□ -2.07
UFD4YKL010C IBD2P53892 351 aa2.13□□□□□ -2.07
UFD4YKL010C KTR6P54070 446 aa2.13□□□□□ -2.07
UFD4YKL010C BCP1Q06338 283 aa2.13□□□□□ -2.07
UFD4YKL010C BSP1Q06604 576 aa2.13□□□□□ -2.07
UFD4YKL010C YLR012CQ07927 99 aa2.13□□□□□ -2.07
UFD4YKL010C MCD1Q12158 566 aa2.13□□□□□ -2.07
UFD4YKL010C MSH5Q12175 901 aa2.13□□□□□ -2.07
UFD4YKL010C PKH2Q12236 1081 aaKnown RBP2.13□□□□□ -2.07
UFD4YKL010C SUT2Q12286 268 aa2.13□□□□□ -2.07
UFD4YKL010C ICT1Q12385 394 aa2.13□□□□□ -2.07
UFD4YKL010C GTT2Q12390 233 aa2.13□□□□□ -2.07
UFD4YKL010C EMP46Q12396 444 aa2.13□□□□□ -2.07
UFD4YKL010C YPR089WO13585 888 aa2.13□□□□□ -2.07
UFD4YKL010C GAL3P13045 520 aa2.13□□□□□ -2.07
UFD4YKL010C HOM2P13663 365 aaKnown RBP2.13□□□□□ -2.07
UFD4YKL010C ABF1P14164 731 aa2.13□□□□□ -2.07
UFD4YKL010C NCP1P16603 691 aaKnown RBP2.13□□□□□ -2.07
UFD4YKL010C KGD1P20967 1014 aaKnown RBP2.13□□□□□ -2.07
UFD4YKL010C CNA1P23287 553 aa2.13□□□□□ -2.07
UFD4YKL010C CDC48P25694 835 aaKnown RBP2.13□□□□□ -2.07
UFD4YKL010C MLF3P32047 452 aa2.13□□□□□ -2.07
UFD4YKL010C DGR2P32330 852 aa2.13□□□□□ -2.07
UFD4YKL010C CYS4P32582 507 aaKnown RBP2.13□□□□□ -2.07
UFD4YKL010C TIF3P34167 436 aaKnown RBP2.13□□□□□ -2.07
UFD4YKL010C TOM20P35180 183 aa2.13□□□□□ -2.07
UFD4YKL010C TGL4P36165 910 aa2.13□□□□□ -2.07
UFD4YKL010C SHE3P38272 425 aaKnown RBP2.13□□□□□ -2.07
UFD4YKL010C HXT5P38695 592 aa2.13□□□□□ -2.07
UFD4YKL010C YLF2P38746 405 aa2.13□□□□□ -2.07
UFD4YKL010C MPT5P39016 859 aaKnown RBP RIP-Chip data2.13□□□□□ -2.07not detected
UFD4YKL010C YTA6P40328 754 aa2.13□□□□□ -2.07
UFD4YKL010C GAT1P43574 510 aa2.13□□□□□ -2.07
UFD4YKL010C IRC5P43610 853 aa2.13□□□□□ -2.07
UFD4YKL010C MPS3P47069 682 aa2.13□□□□□ -2.07
UFD4YKL010C MTO1P53070 669 aa2.13□□□□□ -2.07
UFD4YKL010C NCS6P53088 359 aa2.13□□□□□ -2.07
UFD4YKL010C YNR068CP53754 272 aa2.13□□□□□ -2.07
UFD4YKL010C YNL033WP53964 284 aa2.13□□□□□ -2.07
UFD4YKL010C YNL019CP53975 284 aa2.13□□□□□ -2.07
UFD4YKL010C NPL3Q01560 414 aaKnown RBP RIP-Chip data2.13□□□□□ -2.07not detected
UFD4YKL010C GIP3Q03016 1276 aa2.13□□□□□ -2.07
UFD4YKL010C SKY1Q03656 742 aa2.13□□□□□ -2.07
UFD4YKL010C SPC2Q04969 178 aa2.13□□□□□ -2.07
UFD4YKL010C MFG1Q07684 458 aa2.13□□□□□ -2.07
UFD4YKL010C BSC1Q12140 328 aa2.13□□□□□ -2.07
UFD4YKL010C SIA1Q12212 622 aa2.13□□□□□ -2.07
UFD4YKL010C WTM1Q12363 437 aaKnown RBP2.13□□□□□ -2.07
UFD4YKL010C NKP1Q12493 238 aa2.13□□□□□ -2.07
UFD4YKL010C CYT1P07143 309 aa2.13□□□□□ -2.07
UFD4YKL010C FBA1P14540 359 aaKnown RBP2.13□□□□□ -2.07
UFD4YKL010C DAP2P18962 818 aa2.13□□□□□ -2.07
UFD4YKL010C PHO3P24031 467 aa2.13□□□□□ -2.07
UFD4YKL010C CLB3P24870 427 aa2.13□□□□□ -2.07
UFD4YKL010C SOL2P37262 315 aa2.13□□□□□ -2.07
UFD4YKL010C UBA4P38820 440 aa2.13□□□□□ -2.07
UFD4YKL010C EXO1P39875 702 aa2.13□□□□□ -2.07
UFD4YKL010C ISC1P40015 477 aaKnown RBP2.13□□□□□ -2.07
UFD4YKL010C GAB1P41733 394 aa2.13□□□□□ -2.07
UFD4YKL010C PTR3P43606 678 aa2.13□□□□□ -2.07
UFD4YKL010C PFD1P46988 109 aa2.13□□□□□ -2.07
UFD4YKL010C PSP1P50896 841 aaKnown RBP2.13□□□□□ -2.07
UFD4YKL010C GTR2P53290 341 aa2.13□□□□□ -2.07
UFD4YKL010C YNL144CP53907 740 aa2.13□□□□□ -2.07
UFD4YKL010C ELP3Q02908 557 aaKnown RBP2.13□□□□□ -2.07
UFD4YKL010C MUB1Q03162 620 aa2.13□□□□□ -2.07
UFD4YKL010C TRS31Q03337 283 aa2.13□□□□□ -2.07
UFD4YKL010C RCO1Q04779 684 aa2.13□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms