RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W ADE17P38009 592 aaKnown RBP2.32□□□□□ -2.04
MSL1YIR009W YPK3P38070 525 aa2.32□□□□□ -2.04
MSL1YIR009W SRO77P38163 1010 aa2.32□□□□□ -2.04
MSL1YIR009W RFC1P38630 861 aaKnown RBP2.32□□□□□ -2.04
MSL1YIR009W SRP72P38688 640 aaKnown RBP2.32□□□□□ -2.04
MSL1YIR009W SPO22P40511 975 aa2.32□□□□□ -2.04
MSL1YIR009W VPS4P52917 437 aa2.32□□□□□ -2.04
MSL1YIR009W VPS75P53853 264 aa2.32□□□□□ -2.04
MSL1YIR009W RCO1Q04779 684 aa2.32□□□□□ -2.04
MSL1YIR009W ATG23Q06671 453 aa2.32□□□□□ -2.04
MSL1YIR009W RIX7Q07844 837 aaKnown RBP2.32□□□□□ -2.04
MSL1YIR009W PSK2Q08217 1101 aa2.32□□□□□ -2.04
MSL1YIR009W TCO89Q08921 799 aa2.32□□□□□ -2.04
MSL1YIR009W CTI6Q08923 506 aa2.32□□□□□ -2.04
MSL1YIR009W RCN2Q12044 265 aa2.32□□□□□ -2.04
MSL1YIR009W SMC6Q12749 1114 aa2.32□□□□□ -2.04
MSL1YIR009W VCX1Q99385 411 aa2.32□□□□□ -2.04
MSL1YIR009W TCB3Q03640 1545 aaKnown RBP2.32□□□□□ -2.04
MSL1YIR009W CHO1P08456 276 aa2.31□□□□□ -2.04
MSL1YIR009W LRE1P25579 583 aaKnown RBP2.31□□□□□ -2.04
MSL1YIR009W CDC60P26637 1090 aaKnown RBP2.31□□□□□ -2.04
MSL1YIR009W PDR3P33200 976 aa2.31□□□□□ -2.04
MSL1YIR009W PEX5P35056 612 aa2.31□□□□□ -2.04
MSL1YIR009W YKL050CP35736 922 aa2.31□□□□□ -2.04
MSL1YIR009W UBP13P38187 747 aa2.31□□□□□ -2.04
MSL1YIR009W IME4P41833 600 aa2.31□□□□□ -2.04
MSL1YIR009W LYS4P49367 693 aaPredicted RBP2.31□□□□□ -2.04
MSL1YIR009W YNL234WP53857 426 aa2.31□□□□□ -2.04
MSL1YIR009W SXM1Q04175 944 aaKnown RBP2.31□□□□□ -2.04
MSL1YIR009W SKG3Q06315 1026 aa2.31□□□□□ -2.04
MSL1YIR009W MCP2Q06567 569 aa2.31□□□□□ -2.04
MSL1YIR009W BSC1Q12140 328 aa2.31□□□□□ -2.04
MSL1YIR009W ISA2Q12425 185 aa2.31□□□□□ -2.04
MSL1YIR009W RTN2Q12443 393 aa2.31□□□□□ -2.04
MSL1YIR009W NOP58Q12499 511 aaKnown RBP2.31□□□□□ -2.04
MSL1YIR009W YBR298C-AQ8TGK4 73 aa2.31□□□□□ -2.04
MSL1YIR009W YBR085C-AO43137 85 aa2.3□□□□□ -2.04
MSL1YIR009W EST1P17214 699 aaPredicted RBP2.3□□□□□ -2.04
MSL1YIR009W SRP54P20424 541 aaKnown RBP2.3□□□□□ -2.04
MSL1YIR009W ROX1P25042 368 aa2.3□□□□□ -2.04
MSL1YIR009W RPC53P25441 422 aa2.3□□□□□ -2.04
MSL1YIR009W ERG3P32353 365 aa2.3□□□□□ -2.04
MSL1YIR009W AUR1P36107 401 aaPredicted RBP2.3□□□□□ -2.04
MSL1YIR009W GEX2P36173 615 aa2.3□□□□□ -2.04
MSL1YIR009W SLZ1P40167 298 aa2.3□□□□□ -2.04
MSL1YIR009W SEC24P40482 926 aaKnown RBP2.3□□□□□ -2.04
MSL1YIR009W AAD10P47182 288 aa2.3□□□□□ -2.04
MSL1YIR009W PIL1P53252 339 aaKnown RBP2.3□□□□□ -2.04
MSL1YIR009W INN1P53901 409 aa2.3□□□□□ -2.04
MSL1YIR009W MUB1Q03162 620 aa2.3□□□□□ -2.04
MSL1YIR009W YML037CQ03703 340 aa2.3□□□□□ -2.04
MSL1YIR009W EKI1Q03764 534 aa2.3□□□□□ -2.04
MSL1YIR009W ARP10Q04549 284 aa2.3□□□□□ -2.04
MSL1YIR009W RSF1Q05043 376 aa2.3□□□□□ -2.04
MSL1YIR009W CRN1Q06440 651 aa2.3□□□□□ -2.04
MSL1YIR009W SWA2Q06677 668 aa2.3□□□□□ -2.04
MSL1YIR009W DAP1Q12091 152 aa2.3□□□□□ -2.04
MSL1YIR009W MET5P47169 1442 aa2.3□□□□□ -2.04
MSL1YIR009W IRC20Q06554 1556 aa2.3□□□□□ -2.04
MSL1YIR009W ECM5Q03214 1411 aa2.29□□□□□ -2.04
MSL1YIR009W PRP16P15938 1071 aaPredicted RBP2.29□□□□□ -2.04
MSL1YIR009W KAR3P17119 729 aa2.29□□□□□ -2.04
MSL1YIR009W LCB1P25045 558 aaKnown RBP2.29□□□□□ -2.04
MSL1YIR009W OCA4P25366 362 aa2.29□□□□□ -2.04
MSL1YIR009W CDC15P27636 974 aa2.29□□□□□ -2.04
MSL1YIR009W SRB5P32585 307 aa2.29□□□□□ -2.04
MSL1YIR009W SAS3P34218 831 aa2.29□□□□□ -2.04
MSL1YIR009W RIM2P38127 377 aa2.29□□□□□ -2.04
MSL1YIR009W KRE9P39005 276 aa2.29□□□□□ -2.04
MSL1YIR009W FLC2P39719 783 aa2.29□□□□□ -2.04
MSL1YIR009W YEL057CP39983 233 aa2.29□□□□□ -2.04
MSL1YIR009W BUR6P40096 142 aa2.29□□□□□ -2.04
MSL1YIR009W SGN1P40561 250 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
MSL1YIR009W AXL1P40851 1208 aa2.29□□□□□ -2.04
MSL1YIR009W HXT9P40885 567 aa2.29□□□□□ -2.04
MSL1YIR009W RTS2P40962 232 aa2.29□□□□□ -2.04
MSL1YIR009W IAH1P41734 238 aa2.29□□□□□ -2.04
MSL1YIR009W ROK1P45818 564 aaPredicted RBP2.29□□□□□ -2.04
MSL1YIR009W RPS7BP48164 190 aaKnown RBP2.29□□□□□ -2.04
MSL1YIR009W SGF73P53165 657 aa2.29□□□□□ -2.04
MSL1YIR009W YGR250CP53316 781 aaKnown RBP2.29□□□□□ -2.04
MSL1YIR009W DCP2P53550 970 aaKnown RBP2.29□□□□□ -2.04
MSL1YIR009W MAK10Q02197 733 aa2.29□□□□□ -2.04
MSL1YIR009W CTL1Q03220 320 aaKnown RBP2.29□□□□□ -2.04
MSL1YIR009W PFA5Q03289 374 aa2.29□□□□□ -2.04
MSL1YIR009W BUD22Q04347 519 aaKnown RBP2.29□□□□□ -2.04
MSL1YIR009W RIM20Q12033 661 aa2.29□□□□□ -2.04
MSL1YIR009W YRF1-4O13559 1382 aa2.28□□□□□ -2.04
MSL1YIR009W YML133CQ03099 1374 aa2.28□□□□□ -2.04
MSL1YIR009W YLL067CQ07888 1374 aa2.28□□□□□ -2.04
MSL1YIR009W YLL066CQ99208 1374 aa2.28□□□□□ -2.04
MSL1YIR009W PET111P08468 800 aa2.28□□□□□ -2.04
MSL1YIR009W PDA1P16387 420 aaKnown RBP2.28□□□□□ -2.04
MSL1YIR009W PDX1P16451 410 aa2.28□□□□□ -2.04
MSL1YIR009W TKL1P23254 680 aaKnown RBP2.28□□□□□ -2.04
MSL1YIR009W VMA16P23968 213 aa2.28□□□□□ -2.04
MSL1YIR009W GPI10P30777 616 aa2.28□□□□□ -2.04
MSL1YIR009W DPH2P32461 534 aa2.28□□□□□ -2.04
MSL1YIR009W VPH1P32563 840 aaKnown RBP2.28□□□□□ -2.04
MSL1YIR009W TRS65P32893 560 aa2.28□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms