RNA–Protein interactions for RNA: YHL022C

SPO11, Transcript of Meiosis-specific protein that initiates meiotic recombination, yeast

Gene SPO11, Length 1,197 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPO11	YHL022C	YEH2	Q07950	538 aa		3.78	□□□□□ -1.8
SPO11	YHL022C	ARP6	Q12509	438 aa		3.78	□□□□□ -1.8
SPO11	YHL022C	SNC1	P31109	117 aa		3.77	□□□□□ -1.81
SPO11	YHL022C	LOS1	P33418	1100 aa	Predicted RBP	3.77	□□□□□ -1.81
SPO11	YHL022C	RRP3	P38712	501 aa	Known RBP	3.77	□□□□□ -1.81
SPO11	YHL022C	YHR218W	P38899	603 aa		3.77	□□□□□ -1.81
SPO11	YHL022C	KAP123	P40069	1113 aa	Known RBP	3.77	□□□□□ -1.81
SPO11	YHL022C	ROK1	P45818	564 aa	Predicted RBP	3.77	□□□□□ -1.81
SPO11	YHL022C	SIP4	P46954	829 aa		3.77	□□□□□ -1.81
SPO11	YHL022C	ERG26	P53199	349 aa	Known RBP	3.77	□□□□□ -1.81
SPO11	YHL022C	YPL014W	Q02606	381 aa		3.77	□□□□□ -1.81
SPO11	YHL022C	VIP1	Q06685	1146 aa	Known RBP	3.77	□□□□□ -1.81
SPO11	YHL022C	TEN1	Q07921	160 aa		3.77	□□□□□ -1.81
SPO11	YHL022C	PPT2	Q12036	173 aa		3.77	□□□□□ -1.81
SPO11	YHL022C	LEU9	Q12166	604 aa	Known RBP	3.77	□□□□□ -1.81
SPO11	YHL022C	RPL15A	P05748	204 aa	Known RBP	3.76	□□□□□ -1.81
SPO11	YHL022C	SGV1	P23293	657 aa	Known RBP	3.76	□□□□□ -1.81
SPO11	YHL022C	LAG1	P38703	411 aa		3.76	□□□□□ -1.81
SPO11	YHL022C	MDM31	P38880	579 aa		3.76	□□□□□ -1.81
SPO11	YHL022C	YJR061W	P40355	935 aa		3.76	□□□□□ -1.81
SPO11	YHL022C	SMM1	P53720	384 aa	Known RBP	3.76	□□□□□ -1.81
SPO11	YHL022C	CBK1	P53894	756 aa		3.76	□□□□□ -1.81
SPO11	YHL022C	SAM50	P53969	484 aa		3.76	□□□□□ -1.81
SPO11	YHL022C	YVH1	Q02256	364 aa	Known RBP	3.76	□□□□□ -1.81
SPO11	YHL022C	HCR1	Q05775	265 aa	Known RBP	3.76	□□□□□ -1.81
SPO11	YHL022C	NBP2	Q12163	236 aa		3.76	□□□□□ -1.81
SPO11	YHL022C	VMA16	P23968	213 aa		3.75	□□□□□ -1.81
SPO11	YHL022C	CPR3	P25719	182 aa		3.75	□□□□□ -1.81
SPO11	YHL022C	BUD14	P27637	709 aa		3.75	□□□□□ -1.81
SPO11	YHL022C	SYN8	P31377	255 aa		3.75	□□□□□ -1.81
SPO11	YHL022C	MTR2	P34232	184 aa	Known RBP	3.75	□□□□□ -1.81
SPO11	YHL022C	ECM15	P35195	104 aa		3.75	□□□□□ -1.81
SPO11	YHL022C	RRN3	P36070	627 aa		3.75	□□□□□ -1.81
SPO11	YHL022C	YBR139W	P38109	508 aa		3.75	□□□□□ -1.81
SPO11	YHL022C	YML131W	Q03102	365 aa		3.75	□□□□□ -1.81
SPO11	YHL022C	YMR160W	Q03823	816 aa		3.75	□□□□□ -1.81
SPO11	YHL022C	DPB4	Q04603	196 aa	Known RBP	3.75	□□□□□ -1.81
SPO11	YHL022C	THI20	Q08224	551 aa		3.75	□□□□□ -1.81
SPO11	YHL022C	KGD1	P20967	1014 aa	Known RBP	3.74	□□□□□ -1.81
SPO11	YHL022C	SEC62	P21825	274 aa		3.74	□□□□□ -1.81
SPO11	YHL022C	ADH7	P25377	361 aa		3.74	□□□□□ -1.81
SPO11	YHL022C	CMK1	P27466	446 aa	Known RBP	3.74	□□□□□ -1.81
SPO11	YHL022C	AGA1	P32323	725 aa		3.74	□□□□□ -1.81
SPO11	YHL022C	VPS24	P36095	224 aa	Known RBP	3.74	□□□□□ -1.81
SPO11	YHL022C	FUI1	P38196	639 aa		3.74	□□□□□ -1.81
SPO11	YHL022C	RPM2	Q02773	1202 aa		3.74	□□□□□ -1.81
SPO11	YHL022C	RAD30	Q04049	632 aa		3.74	□□□□□ -1.81
SPO11	YHL022C	CYB2	P00175	591 aa		3.73	□□□□□ -1.81
SPO11	YHL022C	GDH1	P07262	454 aa	Known RBP	3.73	□□□□□ -1.81
SPO11	YHL022C	NDC1	P32500	655 aa		3.73	□□□□□ -1.81
SPO11	YHL022C	VPS17	P32913	551 aa		3.73	□□□□□ -1.81
SPO11	YHL022C	SIP2	P34164	415 aa	Known RBP	3.73	□□□□□ -1.81
SPO11	YHL022C	MAL33	P38157	468 aa		3.73	□□□□□ -1.81
SPO11	YHL022C	SDS24	P38314	527 aa		3.73	□□□□□ -1.81
SPO11	YHL022C	YFR016C	P43597	1233 aa	Known RBP	3.73	□□□□□ -1.81
SPO11	YHL022C	YGL082W	P53155	381 aa		3.73	□□□□□ -1.81
SPO11	YHL022C	VMS1	Q04311	632 aa	Known RBP	3.73	□□□□□ -1.81
SPO11	YHL022C	CDC45	Q08032	650 aa		3.73	□□□□□ -1.81
SPO11	YHL022C	TCO89	Q08921	799 aa		3.73	□□□□□ -1.81
SPO11	YHL022C	FUM1	P08417	488 aa	Known RBP	3.72	□□□□□ -1.81
SPO11	YHL022C	PWP2	P25635	923 aa	Known RBP	3.72	□□□□□ -1.81
SPO11	YHL022C	VPS52	P39904	641 aa		3.72	□□□□□ -1.81
SPO11	YHL022C	RPH1	P39956	796 aa		3.72	□□□□□ -1.81
SPO11	YHL022C	YTA12	P40341	825 aa		3.72	□□□□□ -1.81
SPO11	YHL022C	DPH1	P40487	425 aa	Known RBP	3.72	□□□□□ -1.81
SPO11	YHL022C	RPR2	P40571	144 aa		3.72	□□□□□ -1.81
SPO11	YHL022C	YJL213W	P40896	331 aa		3.72	□□□□□ -1.81
SPO11	YHL022C	RTT101	P47050	842 aa		3.72	□□□□□ -1.81
SPO11	YHL022C	YDL186W	P48568	277 aa		3.72	□□□□□ -1.81
SPO11	YHL022C	DUG3	P53871	357 aa		3.72	□□□□□ -1.81
SPO11	YHL022C	RHO4	Q00246	291 aa		3.72	□□□□□ -1.81
SPO11	YHL022C	IOC4	Q04213	475 aa		3.72	□□□□□ -1.81
SPO11	YHL022C	TLG2	Q08144	397 aa		3.72	□□□□□ -1.81
SPO11	YHL022C	RSA1	Q08932	381 aa		3.72	□□□□□ -1.81
SPO11	YHL022C	SET6	Q12529	373 aa		3.72	□□□□□ -1.81
SPO11	YHL022C	NOP1	P15646	327 aa	Known RBP	3.71	□□□□□ -1.82
SPO11	YHL022C	AGP2	P38090	596 aa		3.71	□□□□□ -1.82
SPO11	YHL022C	ARC1	P46672	376 aa	Known RBP	3.71	□□□□□ -1.82
SPO11	YHL022C	MSC1	Q03104	513 aa		3.71	□□□□□ -1.82
SPO11	YHL022C	SSP2	Q08646	371 aa		3.71	□□□□□ -1.82
SPO11	YHL022C	MCK1	P21965	375 aa	Known RBP	3.7	□□□□□ -1.82
SPO11	YHL022C	BUD5	P25300	642 aa	Predicted RBP	3.7	□□□□□ -1.82
SPO11	YHL022C	PUP3	P25451	205 aa	Known RBP	3.7	□□□□□ -1.82
SPO11	YHL022C	PTR2	P32901	601 aa		3.7	□□□□□ -1.82
SPO11	YHL022C	YBL055C	P34220	418 aa	Predicted RBP	3.7	□□□□□ -1.82
SPO11	YHL022C	YKL100C	P34248	587 aa		3.7	□□□□□ -1.82
SPO11	YHL022C	YNK1	P36010	153 aa	Known RBP	3.7	□□□□□ -1.82
SPO11	YHL022C	PTR3	P43606	678 aa		3.7	□□□□□ -1.82
SPO11	YHL022C	COS10	P52924	374 aa		3.7	□□□□□ -1.82
SPO11	YHL022C	BUD32	P53323	261 aa		3.7	□□□□□ -1.82
SPO11	YHL022C	EFM6	P53970	246 aa		3.7	□□□□□ -1.82
SPO11	YHL022C	YSA1	Q01976	231 aa		3.7	□□□□□ -1.82
SPO11	YHL022C	GLO2	Q05584	274 aa		3.7	□□□□□ -1.82
SPO11	YHL022C	SKM1	Q12469	655 aa		3.7	□□□□□ -1.82
SPO11	YHL022C	ARD1	P07347	238 aa	Predicted RBP	3.69	□□□□□ -1.82
SPO11	YHL022C	CDC24	P11433	854 aa	Predicted RBP	3.69	□□□□□ -1.82
SPO11	YHL022C	MTF1	P14908	341 aa	Known RBP	3.69	□□□□□ -1.82
SPO11	YHL022C	SPC110	P32380	944 aa		3.69	□□□□□ -1.82
SPO11	YHL022C	NUP133	P36161	1157 aa		3.69	□□□□□ -1.82
SPO11	YHL022C	AVT5	P38176	459 aa		3.69	□□□□□ -1.82

Retrieved 100 of 5,963 RNA–protein pairs in 34.5 ms