RNA–Protein interactions for RNA: YGR171C

MSM1, Transcript of Mitochondrial methionyl-tRNA synthetase (MetRS), yeastyeast

Gene MSM1, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSM1YGR171C YDR286CQ05530 114 aa3.59□□□□□ -1.83
MSM1YGR171C MRD1Q06106 887 aaKnown RBP3.59□□□□□ -1.83
MSM1YGR171C PGC1Q08959 321 aa3.59□□□□□ -1.83
MSM1YGR171C SMF3Q12078 473 aaPredicted RBP3.59□□□□□ -1.83
MSM1YGR171C LEU9Q12166 604 aaKnown RBP3.59□□□□□ -1.83
MSM1YGR171C NDJ1Q12366 352 aa3.59□□□□□ -1.83
MSM1YGR171C KGD1P20967 1014 aaKnown RBP3.58□□□□□ -1.84
MSM1YGR171C TRX1P22217 103 aaKnown RBP3.58□□□□□ -1.84
MSM1YGR171C APN1P22936 367 aa3.58□□□□□ -1.84
MSM1YGR171C MRE11P32829 692 aa3.58□□□□□ -1.84
MSM1YGR171C WBP1P33767 430 aaKnown RBP3.58□□□□□ -1.84
MSM1YGR171C PMT1P33775 817 aa3.58□□□□□ -1.84
MSM1YGR171C CMC1P36064 111 aa3.58□□□□□ -1.84
MSM1YGR171C OTU2P38747 307 aaKnown RBP3.58□□□□□ -1.84
MSM1YGR171C ELO1P39540 310 aa3.58□□□□□ -1.84
MSM1YGR171C TIF4631P39935 952 aaKnown RBP3.58□□□□□ -1.84
MSM1YGR171C MEP1P40260 492 aa3.58□□□□□ -1.84
MSM1YGR171C LTP1P40347 161 aa3.58□□□□□ -1.84
MSM1YGR171C CDC1P40986 491 aa3.58□□□□□ -1.84
MSM1YGR171C NMD5P46970 1048 aa3.58□□□□□ -1.84
MSM1YGR171C PET130P47065 347 aa3.58□□□□□ -1.84
MSM1YGR171C IMD4P50094 524 aaKnown RBP3.58□□□□□ -1.84
MSM1YGR171C TWF1P53250 332 aa3.58□□□□□ -1.84
MSM1YGR171C YGR127WP53275 312 aa3.58□□□□□ -1.84
MSM1YGR171C IPI3P53877 555 aa3.58□□□□□ -1.84
MSM1YGR171C RPC11Q04307 110 aaPredicted RBP3.58□□□□□ -1.84
MSM1YGR171C DPB4Q04603 196 aaKnown RBP3.58□□□□□ -1.84
MSM1YGR171C YLR049CQ12110 428 aa3.58□□□□□ -1.84
MSM1YGR171C YNL162W-AQ3E7A8 72 aa3.58□□□□□ -1.84
MSM1YGR171C NAT1P12945 854 aaKnown RBP3.58□□□□□ -1.84
MSM1YGR171C REC107P21651 314 aa3.58□□□□□ -1.84
MSM1YGR171C MNE1P24720 663 aa3.58□□□□□ -1.84
MSM1YGR171C YCR006CP25350 157 aa3.58□□□□□ -1.84
MSM1YGR171C SYN8P31377 255 aa3.58□□□□□ -1.84
MSM1YGR171C TIF3P34167 436 aaKnown RBP3.58□□□□□ -1.84
MSM1YGR171C GCS1P35197 352 aa3.58□□□□□ -1.84
MSM1YGR171C PES4P39684 611 aa3.58□□□□□ -1.84
MSM1YGR171C PTR3P43606 678 aa3.58□□□□□ -1.84
MSM1YGR171C YJL055WP47044 245 aa3.58□□□□□ -1.84
MSM1YGR171C VTI1Q04338 217 aa3.58□□□□□ -1.84
MSM1YGR171C RQC1Q05468 723 aaKnown RBP3.58□□□□□ -1.84
MSM1YGR171C COQ11Q05892 277 aa3.58□□□□□ -1.84
MSM1YGR171C RLM1Q12224 676 aa3.58□□□□□ -1.84
MSM1YGR171C FRE7Q12333 620 aa3.58□□□□□ -1.84
MSM1YGR171C SGS1P35187 1447 aa3.57□□□□□ -1.84
MSM1YGR171C TY1B-AO13527 1196 aaKnown RBP3.57□□□□□ -1.84
MSM1YGR171C PGK1P00560 416 aaKnown RBP3.57□□□□□ -1.84
MSM1YGR171C MRP13P12686 339 aa3.57□□□□□ -1.84
MSM1YGR171C MBR1P23493 339 aa3.57□□□□□ -1.84
MSM1YGR171C PUP3P25451 205 aaKnown RBP3.57□□□□□ -1.84
MSM1YGR171C IMG1P25626 169 aa3.57□□□□□ -1.84
MSM1YGR171C OCT1P35999 772 aa3.57□□□□□ -1.84
MSM1YGR171C STB6P36085 766 aa3.57□□□□□ -1.84
MSM1YGR171C APE3P37302 537 aaKnown RBP3.57□□□□□ -1.84
MSM1YGR171C ICS2P38284 255 aa3.57□□□□□ -1.84
MSM1YGR171C ATF1P40353 525 aa3.57□□□□□ -1.84
MSM1YGR171C SEC28P40509 296 aaKnown RBP3.57□□□□□ -1.84
MSM1YGR171C SNO3P43544 222 aa3.57□□□□□ -1.84
MSM1YGR171C SGF73P53165 657 aa3.57□□□□□ -1.84
MSM1YGR171C SEC5P89102 971 aa3.57□□□□□ -1.84
MSM1YGR171C PEX25Q02969 394 aa3.57□□□□□ -1.84
MSM1YGR171C PFA5Q03289 374 aa3.57□□□□□ -1.84
MSM1YGR171C FIN1Q03898 291 aa3.57□□□□□ -1.84
MSM1YGR171C YMR111CQ04461 462 aaPredicted RBP3.57□□□□□ -1.84
MSM1YGR171C YLR345WQ06137 509 aa3.57□□□□□ -1.84
MSM1YGR171C YLR455WQ06188 304 aa3.57□□□□□ -1.84
MSM1YGR171C MCH4Q08268 501 aa3.57□□□□□ -1.84
MSM1YGR171C YOL159CQ08300 171 aa3.57□□□□□ -1.84
MSM1YGR171C APL4Q12028 832 aa3.57□□□□□ -1.84
MSM1YGR171C TAD3Q9URQ3 322 aa3.57□□□□□ -1.84
MSM1YGR171C YRF1-4O13559 1382 aa3.56□□□□□ -1.84
MSM1YGR171C CHO1P08456 276 aa3.56□□□□□ -1.84
MSM1YGR171C RAP1P11938 827 aa3.56□□□□□ -1.84
MSM1YGR171C ART10P18634 518 aaKnown RBP3.56□□□□□ -1.84
MSM1YGR171C TKL1P23254 680 aaKnown RBP3.56□□□□□ -1.84
MSM1YGR171C YCR051WP25631 222 aa3.56□□□□□ -1.84
MSM1YGR171C PAP1P29468 568 aaKnown RBP3.56□□□□□ -1.84
MSM1YGR171C ARN1P38731 627 aa3.56□□□□□ -1.84
MSM1YGR171C HXT14P42833 540 aa3.56□□□□□ -1.84
MSM1YGR171C YJL107CP42947 387 aa3.56□□□□□ -1.84
MSM1YGR171C FYV8P46949 817 aaKnown RBP3.56□□□□□ -1.84
MSM1YGR171C ART5P53244 586 aaKnown RBP3.56□□□□□ -1.84
MSM1YGR171C IDP3P53982 420 aaKnown RBP3.56□□□□□ -1.84
MSM1YGR171C SEG1Q04279 960 aa3.56□□□□□ -1.84
MSM1YGR171C ERB1Q04660 807 aaKnown RBP3.56□□□□□ -1.84
MSM1YGR171C PDR8Q06149 701 aa3.56□□□□□ -1.84
MSM1YGR171C SEC39Q12745 709 aa3.56□□□□□ -1.84
MSM1YGR171C STE50P25344 346 aa3.56□□□□□ -1.84
MSM1YGR171C PRD1P25375 712 aa3.56□□□□□ -1.84
MSM1YGR171C BOS1P25385 244 aa3.56□□□□□ -1.84
MSM1YGR171C COQ3P27680 312 aa3.56□□□□□ -1.84
MSM1YGR171C TSC10P38342 320 aa3.56□□□□□ -1.84
MSM1YGR171C APT1P49435 187 aaKnown RBP3.56□□□□□ -1.84
MSM1YGR171C EOS1P53938 366 aa3.56□□□□□ -1.84
MSM1YGR171C YMR178WQ03219 274 aaKnown RBP3.56□□□□□ -1.84
MSM1YGR171C TLG1Q03322 224 aa3.56□□□□□ -1.84
MSM1YGR171C TEN1Q07921 160 aa3.56□□□□□ -1.84
MSM1YGR171C GPA1P08539 472 aa3.55□□□□□ -1.84
MSM1YGR171C SAC1P32368 623 aaKnown RBP3.55□□□□□ -1.84
MSM1YGR171C YME1P32795 747 aa3.55□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms