RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W ANS1P38832 159 aa3.42□□□□□ -1.86
SEC4YFL005W YMR124WP39523 943 aaKnown RBP3.42□□□□□ -1.86
SEC4YFL005W MET28P40573 187 aa3.42□□□□□ -1.86
SEC4YFL005W RPL15BP54780 204 aaPredicted RBP3.42□□□□□ -1.86
SEC4YFL005W ECI1Q05871 280 aa3.42□□□□□ -1.86
SEC4YFL005W ADE13Q05911 482 aaKnown RBP3.42□□□□□ -1.86
SEC4YFL005W VPS38Q05919 439 aa3.42□□□□□ -1.86
SEC4YFL005W UTP21Q06078 939 aaPredicted RBP3.42□□□□□ -1.86
SEC4YFL005W ECM30Q06673 1274 aa3.42□□□□□ -1.86
SEC4YFL005W GRC3Q07845 632 aa3.42□□□□□ -1.86
SEC4YFL005W GSH2Q08220 491 aa3.42□□□□□ -1.86
SEC4YFL005W YLR112WQ12130 139 aa3.42□□□□□ -1.86
SEC4YFL005W AVL9Q12500 764 aa3.42□□□□□ -1.86
SEC4YFL005W PUT2P07275 575 aa3.41□□□□□ -1.86
SEC4YFL005W EST1P17214 699 aaPredicted RBP3.41□□□□□ -1.86
SEC4YFL005W MGM1P32266 881 aa3.41□□□□□ -1.86
SEC4YFL005W TIF3P34167 436 aaKnown RBP3.41□□□□□ -1.86
SEC4YFL005W UBP11P36026 717 aa3.41□□□□□ -1.86
SEC4YFL005W STV1P37296 890 aa3.41□□□□□ -1.86
SEC4YFL005W SRO77P38163 1010 aa3.41□□□□□ -1.86
SEC4YFL005W UBA4P38820 440 aa3.41□□□□□ -1.86
SEC4YFL005W SPC97P38863 823 aa3.41□□□□□ -1.86
SEC4YFL005W VRG4P40107 337 aa3.41□□□□□ -1.86
SEC4YFL005W ALG5P40350 334 aa3.41□□□□□ -1.86
SEC4YFL005W YIL060WP40519 144 aa3.41□□□□□ -1.86
SEC4YFL005W HXT9P40885 567 aa3.41□□□□□ -1.86
SEC4YFL005W ROK1P45818 564 aaPredicted RBP3.41□□□□□ -1.86
SEC4YFL005W SGF73P53165 657 aa3.41□□□□□ -1.86
SEC4YFL005W BOP3P53958 396 aa3.41□□□□□ -1.86
SEC4YFL005W RSM23Q01163 450 aa3.41□□□□□ -1.86
SEC4YFL005W CTL1Q03220 320 aaKnown RBP3.41□□□□□ -1.86
SEC4YFL005W TAF11Q04226 346 aa3.41□□□□□ -1.86
SEC4YFL005W YLR287CQ05881 355 aa3.41□□□□□ -1.86
SEC4YFL005W RPS10AQ08745 105 aaPredicted RBP3.41□□□□□ -1.86
SEC4YFL005W SCM3Q12334 223 aa3.41□□□□□ -1.86
SEC4YFL005W FOB1O13329 566 aa3.4□□□□□ -1.87
SEC4YFL005W YPT1P01123 206 aaKnown RBP3.4□□□□□ -1.87
SEC4YFL005W GAL80P04387 435 aa3.4□□□□□ -1.87
SEC4YFL005W CBP1P07252 654 aa3.4□□□□□ -1.87
SEC4YFL005W MRP13P12686 339 aa3.4□□□□□ -1.87
SEC4YFL005W PDA1P16387 420 aaKnown RBP3.4□□□□□ -1.87
SEC4YFL005W ART10P18634 518 aaKnown RBP3.4□□□□□ -1.87
SEC4YFL005W NPL6P32832 435 aa3.4□□□□□ -1.87
SEC4YFL005W YKL100CP34248 587 aa3.4□□□□□ -1.87
SEC4YFL005W TCD2P36101 447 aaKnown RBP3.4□□□□□ -1.87
SEC4YFL005W PHO90P39535 881 aa3.4□□□□□ -1.87
SEC4YFL005W YEL057CP39983 233 aa3.4□□□□□ -1.87
SEC4YFL005W PCI8P40512 444 aa3.4□□□□□ -1.87
SEC4YFL005W SGN1P40561 250 aaKnown RBP RIP-Chip data3.4□□□□□ -1.87not detected
SEC4YFL005W MEP2P41948 499 aa3.4□□□□□ -1.87
SEC4YFL005W RPS10BP46784 105 aaKnown RBP3.4□□□□□ -1.87
SEC4YFL005W HOS2P53096 452 aaPredicted RBP3.4□□□□□ -1.87
SEC4YFL005W IPI3P53877 555 aa3.4□□□□□ -1.87
SEC4YFL005W FIN1Q03898 291 aa3.4□□□□□ -1.87
SEC4YFL005W SPC19Q03954 165 aa3.4□□□□□ -1.87
SEC4YFL005W CDC45Q08032 650 aa3.4□□□□□ -1.87
SEC4YFL005W HER1Q12276 1246 aa3.4□□□□□ -1.87
SEC4YFL005W HSH49Q99181 213 aaPredicted RBP3.4□□□□□ -1.87
SEC4YFL005W SGS1P35187 1447 aa3.39□□□□□ -1.87
SEC4YFL005W MET17P06106 444 aa3.39□□□□□ -1.87
SEC4YFL005W SNF3P10870 884 aa3.39□□□□□ -1.87
SEC4YFL005W YCP4P25349 247 aaKnown RBP3.39□□□□□ -1.87
SEC4YFL005W MRE11P32829 692 aa3.39□□□□□ -1.87
SEC4YFL005W MTR2P34232 184 aaKnown RBP3.39□□□□□ -1.87
SEC4YFL005W RPL32P38061 130 aaKnown RBP3.39□□□□□ -1.87
SEC4YFL005W CIN4P39110 191 aa3.39□□□□□ -1.87
SEC4YFL005W MET18P40469 1032 aa3.39□□□□□ -1.87
SEC4YFL005W MAF1P41910 395 aa3.39□□□□□ -1.87
SEC4YFL005W MDV1P47025 714 aa3.39□□□□□ -1.87
SEC4YFL005W IMD4P50094 524 aaKnown RBP3.39□□□□□ -1.87
SEC4YFL005W PYK2P52489 506 aaKnown RBP3.39□□□□□ -1.87
SEC4YFL005W MSC1Q03104 513 aa3.39□□□□□ -1.87
SEC4YFL005W RPC11Q04307 110 aaPredicted RBP3.39□□□□□ -1.87
SEC4YFL005W YDL218WQ07629 317 aa3.39□□□□□ -1.87
SEC4YFL005W UBX3Q12229 455 aa3.39□□□□□ -1.87
SEC4YFL005W EDE1P34216 1381 aa3.38□□□□□ -1.87
SEC4YFL005W RED1P14291 827 aa3.38□□□□□ -1.87
SEC4YFL005W ROX1P25042 368 aa3.38□□□□□ -1.87
SEC4YFL005W PRD1P25375 712 aa3.38□□□□□ -1.87
SEC4YFL005W WBP1P33767 430 aaKnown RBP3.38□□□□□ -1.87
SEC4YFL005W ASK1P35734 292 aa3.38□□□□□ -1.87
SEC4YFL005W YPK3P38070 525 aa3.38□□□□□ -1.87
SEC4YFL005W VID24P38263 362 aa3.38□□□□□ -1.87
SEC4YFL005W PCL6P40038 420 aa3.38□□□□□ -1.87
SEC4YFL005W DOT5P40553 215 aa3.38□□□□□ -1.87
SEC4YFL005W YIR016WP40572 265 aa3.38□□□□□ -1.87
SEC4YFL005W SOL4P53315 255 aa3.38□□□□□ -1.87
SEC4YFL005W YNL234WP53857 426 aa3.38□□□□□ -1.87
SEC4YFL005W JJJ1P53863 590 aa3.38□□□□□ -1.87
SEC4YFL005W YNL181WP53878 407 aa3.38□□□□□ -1.87
SEC4YFL005W IZH1Q03419 316 aa3.38□□□□□ -1.87
SEC4YFL005W SYF1Q04048 859 aaPredicted RBP3.38□□□□□ -1.87
SEC4YFL005W RDR1Q08904 546 aa3.38□□□□□ -1.87
SEC4YFL005W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.38□□□□□ -1.87not detected
SEC4YFL005W RLM1Q12224 676 aa3.38□□□□□ -1.87
SEC4YFL005W GRX6Q12438 231 aa3.38□□□□□ -1.87
SEC4YFL005W SNC1P31109 117 aa3.37□□□□□ -1.87
SEC4YFL005W ROT2P38138 954 aa3.37□□□□□ -1.87
SEC4YFL005W CST26P38226 397 aa3.37□□□□□ -1.87
SEC4YFL005W MSR1P38714 643 aa3.37□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms