RNA–Protein interactions for RNA: YER116C

SLX8, Transcript of Subunit of Slx5-Slx8 SUMO-targeted ubiquitin ligase (STUbL) complex, yeast

Gene SLX8, Length 825 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX8	YER116C	LAM4	P38800	1345 aa		4.07	□□□□□ -1.76
SLX8	YER116C	HXK2	P04807	486 aa	Known RBP	4.07	□□□□□ -1.76
SLX8	YER116C	CDC36	P06100	191 aa	Predicted RBP	4.07	□□□□□ -1.76
SLX8	YER116C	CBP1	P07252	654 aa		4.07	□□□□□ -1.76
SLX8	YER116C	ARD1	P07347	238 aa	Predicted RBP	4.07	□□□□□ -1.76
SLX8	YER116C	GPA1	P08539	472 aa		4.07	□□□□□ -1.76
SLX8	YER116C	MSB1	P21339	1137 aa	Known RBP	4.07	□□□□□ -1.76
SLX8	YER116C	FAA1	P30624	700 aa	Known RBP	4.07	□□□□□ -1.76
SLX8	YER116C	MCM4	P30665	933 aa	Known RBP	4.07	□□□□□ -1.76
SLX8	YER116C	SRB4	P32569	687 aa		4.07	□□□□□ -1.76
SLX8	YER116C	YME1	P32795	747 aa		4.07	□□□□□ -1.76
SLX8	YER116C	KDX1	P36005	433 aa		4.07	□□□□□ -1.76
SLX8	YER116C	ATP3	P38077	311 aa	Known RBP	4.07	□□□□□ -1.76
SLX8	YER116C	EHT1	P38295	451 aa		4.07	□□□□□ -1.76
SLX8	YER116C	ALG5	P40350	334 aa		4.07	□□□□□ -1.76
SLX8	YER116C	SEC24	P40482	926 aa	Known RBP	4.07	□□□□□ -1.76
SLX8	YER116C	GTS1	P40956	396 aa		4.07	□□□□□ -1.76
SLX8	YER116C	GCD14	P46959	383 aa	Predicted RBP	4.07	□□□□□ -1.76
SLX8	YER116C	YJL132W	P47014	750 aa		4.07	□□□□□ -1.76
SLX8	YER116C	AVT1	P47082	602 aa		4.07	□□□□□ -1.76
SLX8	YER116C	YDL183C	P48569	320 aa		4.07	□□□□□ -1.76
SLX8	YER116C	RPT4	P53549	437 aa	Known RBP	4.07	□□□□□ -1.76
SLX8	YER116C	MNT4	P53745	580 aa		4.07	□□□□□ -1.76
SLX8	YER116C	YNL134C	P53912	376 aa	Known RBP	4.07	□□□□□ -1.76
SLX8	YER116C	YDR179W-A	Q03983	463 aa		4.07	□□□□□ -1.76
SLX8	YER116C	URC2	Q04411	772 aa		4.07	□□□□□ -1.76
SLX8	YER116C	CRF1	Q04930	467 aa		4.07	□□□□□ -1.76
SLX8	YER116C	YLR173W	Q06247	608 aa		4.07	□□□□□ -1.76
SLX8	YER116C	ETT1	Q08421	412 aa	Known RBP	4.07	□□□□□ -1.76
SLX8	YER116C	YOR352W	Q08816	343 aa		4.07	□□□□□ -1.76
SLX8	YER116C	APC2	Q12440	853 aa		4.07	□□□□□ -1.76
SLX8	YER116C	CFT1	Q06632	1357 aa	Known RBP	4.06	□□□□□ -1.76
SLX8	YER116C	SSK22	P25390	1331 aa	Predicted RBP	4.06	□□□□□ -1.76
SLX8	YER116C	YBR085C-A	O43137	85 aa		4.06	□□□□□ -1.76
SLX8	YER116C	CDC37	P06101	506 aa	Known RBP	4.06	□□□□□ -1.76
SLX8	YER116C	ILV5	P06168	395 aa	Known RBP	4.06	□□□□□ -1.76
SLX8	YER116C	ERG20	P08524	352 aa	Known RBP	4.06	□□□□□ -1.76
SLX8	YER116C	TUP1	P16649	713 aa		4.06	□□□□□ -1.76
SLX8	YER116C	FUS3	P16892	353 aa	Known RBP	4.06	□□□□□ -1.76
SLX8	YER116C	PPH22	P23595	377 aa		4.06	□□□□□ -1.76
SLX8	YER116C	SNT1	P25357	1226 aa		4.06	□□□□□ -1.76
SLX8	YER116C	NDI1	P32340	513 aa		4.06	□□□□□ -1.76
SLX8	YER116C	ERG1	P32476	496 aa	Known RBP	4.06	□□□□□ -1.76
SLX8	YER116C	WBP1	P33767	430 aa	Known RBP	4.06	□□□□□ -1.76
SLX8	YER116C	BMH2	P34730	273 aa	Known RBP	4.06	□□□□□ -1.76
SLX8	YER116C	YKL070W	P36087	169 aa		4.06	□□□□□ -1.76
SLX8	YER116C	TCD2	P36101	447 aa	Known RBP	4.06	□□□□□ -1.76
SLX8	YER116C	STV1	P37296	890 aa		4.06	□□□□□ -1.76
SLX8	YER116C	TOM71	P38825	639 aa	Known RBP	4.06	□□□□□ -1.76
SLX8	YER116C	FAD1	P38913	306 aa		4.06	□□□□□ -1.76
SLX8	YER116C	RTR1	P40084	226 aa	Predicted RBP	4.06	□□□□□ -1.76
SLX8	YER116C	GID8	P40208	455 aa		4.06	□□□□□ -1.76
SLX8	YER116C	RPA34	P47006	233 aa	Predicted RBP	4.06	□□□□□ -1.76
SLX8	YER116C	BIT61	P47041	543 aa		4.06	□□□□□ -1.76
SLX8	YER116C	ECM27	P47144	725 aa		4.06	□□□□□ -1.76
SLX8	YER116C	YGR149W	P48236	432 aa		4.06	□□□□□ -1.76
SLX8	YER116C	IMD4	P50094	524 aa	Known RBP	4.06	□□□□□ -1.76
SLX8	YER116C	PIB2	P53191	635 aa		4.06	□□□□□ -1.76
SLX8	YER116C	UTP6	Q02354	440 aa	Known RBP	4.06	□□□□□ -1.76
SLX8	YER116C	MTG1	Q03151	367 aa	Predicted RBP	4.06	□□□□□ -1.76
SLX8	YER116C	YMR102C	Q03177	834 aa		4.06	□□□□□ -1.76
SLX8	YER116C	ACL4	Q03771	387 aa		4.06	□□□□□ -1.76
SLX8	YER116C	YLR455W	Q06188	304 aa		4.06	□□□□□ -1.76
SLX8	YER116C	YFH1	Q07540	174 aa		4.06	□□□□□ -1.76
SLX8	YER116C	PUS7	Q08647	676 aa	Known RBP	4.06	□□□□□ -1.76
SLX8	YER116C	YOR223W	Q12015	292 aa		4.06	□□□□□ -1.76
SLX8	YER116C	AEP3	Q12089	606 aa		4.06	□□□□□ -1.76
SLX8	YER116C	RLM1	Q12224	676 aa		4.06	□□□□□ -1.76
SLX8	YER116C	MDM20	Q12387	796 aa	Known RBP	4.06	□□□□□ -1.76
SLX8	YER116C	YPR089W	O13585	888 aa		4.05	□□□□□ -1.76
SLX8	YER116C	CYC7	P00045	113 aa		4.05	□□□□□ -1.76
SLX8	YER116C	SAM1	P10659	382 aa	Known RBP	4.05	□□□□□ -1.76
SLX8	YER116C	SEC12	P11655	471 aa		4.05	□□□□□ -1.76
SLX8	YER116C	SCH9	P11792	824 aa	Known RBP	4.05	□□□□□ -1.76
SLX8	YER116C	RSR1	P13856	272 aa		4.05	□□□□□ -1.76
SLX8	YER116C	PDA1	P16387	420 aa	Known RBP	4.05	□□□□□ -1.76
SLX8	YER116C	URA4	P20051	364 aa		4.05	□□□□□ -1.76
SLX8	YER116C	VPS33	P20795	691 aa		4.05	□□□□□ -1.76
SLX8	YER116C	DAL81	P21657	970 aa		4.05	□□□□□ -1.76
SLX8	YER116C	ADH7	P25377	361 aa		4.05	□□□□□ -1.76
SLX8	YER116C	GEX1	P25596	615 aa		4.05	□□□□□ -1.76
SLX8	YER116C	RRP1	P35178	278 aa	Predicted RBP	4.05	□□□□□ -1.76
SLX8	YER116C	TUL1	P36096	758 aa		4.05	□□□□□ -1.76
SLX8	YER116C	GEX2	P36173	615 aa		4.05	□□□□□ -1.76
SLX8	YER116C	AGP2	P38090	596 aa		4.05	□□□□□ -1.76
SLX8	YER116C	YHR078W	P38799	552 aa		4.05	□□□□□ -1.76
SLX8	YER116C	CRG1	P38892	291 aa	RIP-Chip data	4.05	□□□□□ -1.76	not detected
SLX8	YER116C	FTR1	P40088	404 aa		4.05	□□□□□ -1.76
SLX8	YER116C	MSS2	P40990	351 aa		4.05	□□□□□ -1.76
SLX8	YER116C	FKH2	P41813	862 aa		4.05	□□□□□ -1.76
SLX8	YER116C	LOC1	P43586	204 aa	Predicted RBP	4.05	□□□□□ -1.76
SLX8	YER116C	IRC8	P47046	822 aa		4.05	□□□□□ -1.76
SLX8	YER116C	CTH1	P47976	325 aa		4.05	□□□□□ -1.76
SLX8	YER116C	PRP31	P49704	494 aa	Predicted RBP	4.05	□□□□□ -1.76
SLX8	YER116C	FMS1	P50264	508 aa		4.05	□□□□□ -1.76
SLX8	YER116C	MND1	P53102	219 aa		4.05	□□□□□ -1.76
SLX8	YER116C	YGR117C	P53270	476 aa		4.05	□□□□□ -1.76
SLX8	YER116C	DSL1	P53847	754 aa		4.05	□□□□□ -1.76
SLX8	YER116C	IPI3	P53877	555 aa		4.05	□□□□□ -1.76
SLX8	YER116C	PGA2	P53903	129 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 59.5 ms