RNA–Protein interactions for RNA: YDR425W

SNX41, Transcript of Sorting nexin, yeastyeast

Gene SNX41, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX41YDR425W STE50P25344 346 aa2.56□□□□□ -2
SNX41YDR425W YCR006CP25350 157 aa2.56□□□□□ -2
SNX41YDR425W SKI2P35207 1287 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
SNX41YDR425W YSW1P38280 609 aa2.56□□□□□ -2
SNX41YDR425W POS5Q06892 414 aa2.56□□□□□ -2
SNX41YDR425W FRE3Q08905 711 aa2.56□□□□□ -2
SNX41YDR425W RPO21P04050 1733 aaKnown RBP2.56□□□□□ -2
SNX41YDR425W CHC1P22137 1653 aaKnown RBP2.56□□□□□ -2
SNX41YDR425W JIP3O13555 125 aa2.56□□□□□ -2
SNX41YDR425W SUI3P09064 285 aaKnown RBP2.56□□□□□ -2
SNX41YDR425W PHO81P17442 1178 aa2.56□□□□□ -2
SNX41YDR425W MCM4P30665 933 aaKnown RBP2.56□□□□□ -2
SNX41YDR425W YEL043WP32618 956 aa2.56□□□□□ -2
SNX41YDR425W NUF2P33895 451 aa2.56□□□□□ -2
SNX41YDR425W SMF1P38925 575 aa2.56□□□□□ -2
SNX41YDR425W YIL161WP40449 235 aaKnown RBP2.56□□□□□ -2
SNX41YDR425W SPO22P40511 975 aa2.56□□□□□ -2
SNX41YDR425W FAF1P40546 346 aaPredicted RBP2.56□□□□□ -2
SNX41YDR425W IAH1P41734 238 aa2.56□□□□□ -2
SNX41YDR425W TRS85P46944 698 aa2.56□□□□□ -2
SNX41YDR425W VPS25P47142 202 aa2.56□□□□□ -2
SNX41YDR425W YGL036WP53185 909 aaPredicted RBP2.56□□□□□ -2
SNX41YDR425W ARC35P53731 342 aaKnown RBP2.56□□□□□ -2
SNX41YDR425W ALF1P53904 254 aa2.56□□□□□ -2
SNX41YDR425W ASI1P54074 624 aa2.56□□□□□ -2
SNX41YDR425W UBX4P54730 416 aa2.56□□□□□ -2
SNX41YDR425W BET4Q00618 327 aa2.56□□□□□ -2
SNX41YDR425W ARP9Q05123 467 aa2.56□□□□□ -2
SNX41YDR425W YLR281CQ05863 155 aa2.56□□□□□ -2
SNX41YDR425W ECI1Q05871 280 aa2.56□□□□□ -2
SNX41YDR425W VPS38Q05919 439 aa2.56□□□□□ -2
SNX41YDR425W STP3Q05937 343 aa2.56□□□□□ -2
SNX41YDR425W NDL1Q06568 189 aa2.56□□□□□ -2
SNX41YDR425W SWA2Q06677 668 aa2.56□□□□□ -2
SNX41YDR425W NYV1Q12255 253 aa2.56□□□□□ -2
SNX41YDR425W PDR18P53756 1333 aa2.55□□□□□ -2
SNX41YDR425W NTE1Q04958 1679 aa2.55□□□□□ -2
SNX41YDR425W YER145C-AA0A023PYF4 145 aa2.55□□□□□ -2
SNX41YDR425W SUP35P05453 685 aaKnown RBP2.55□□□□□ -2
SNX41YDR425W RPL42AP0CX27 106 aaKnown RBP2.55□□□□□ -2
SNX41YDR425W RPL42BP0CX28 106 aaKnown RBP2.55□□□□□ -2
SNX41YDR425W PHO13P19881 312 aa2.55□□□□□ -2
SNX41YDR425W BUD14P27637 709 aa2.55□□□□□ -2
SNX41YDR425W PSO2P30620 661 aa2.55□□□□□ -2
SNX41YDR425W YKT6P36015 200 aaKnown RBP2.55□□□□□ -2
SNX41YDR425W ADE17P38009 592 aaKnown RBP2.55□□□□□ -2
SNX41YDR425W MNN2P38069 597 aa2.55□□□□□ -2
SNX41YDR425W MRX1P40050 688 aa2.55□□□□□ -2
SNX41YDR425W ILM1P47155 203 aa2.55□□□□□ -2
SNX41YDR425W YMR034CQ05131 434 aaPredicted RBP2.55□□□□□ -2
SNX41YDR425W VAC14Q06708 880 aa2.55□□□□□ -2
SNX41YDR425W PSK2Q08217 1101 aa2.55□□□□□ -2
SNX41YDR425W NDD1Q08887 554 aa2.55□□□□□ -2
SNX41YDR425W NEW1Q08972 1196 aaKnown RBP2.55□□□□□ -2
SNX41YDR425W YLR112WQ12130 139 aa2.55□□□□□ -2
SNX41YDR425W MLP1Q02455 1875 aaKnown RBP2.55□□□□□ -2
SNX41YDR425W ATP2P00830 511 aaKnown RBP2.54□□□□□ -2
SNX41YDR425W CDC37P06101 506 aaKnown RBP2.54□□□□□ -2
SNX41YDR425W CHO1P08456 276 aa2.54□□□□□ -2
SNX41YDR425W RPS24AP0CX31 135 aaKnown RBP2.54□□□□□ -2
SNX41YDR425W RPS24BP0CX32 135 aaKnown RBP2.54□□□□□ -2
SNX41YDR425W MRP7P12687 371 aa2.54□□□□□ -2
SNX41YDR425W GCD2P12754 651 aaPredicted RBP2.54□□□□□ -2
SNX41YDR425W NFU1P32860 256 aa2.54□□□□□ -2
SNX41YDR425W GCS1P35197 352 aa2.54□□□□□ -2
SNX41YDR425W NUP120P35729 1037 aa2.54□□□□□ -2
SNX41YDR425W UBP13P38187 747 aa2.54□□□□□ -2
SNX41YDR425W RFT1P38206 574 aaPredicted RBP2.54□□□□□ -2
SNX41YDR425W MET30P39014 640 aa2.54□□□□□ -2
SNX41YDR425W ASE1P50275 885 aa2.54□□□□□ -2
SNX41YDR425W PIB2P53191 635 aa2.54□□□□□ -2
SNX41YDR425W NCS2P53923 493 aaPredicted RBP2.54□□□□□ -2
SNX41YDR425W YKU80Q04437 629 aa2.54□□□□□ -2
SNX41YDR425W YLR177WQ06251 628 aa2.54□□□□□ -2
SNX41YDR425W YOL057WQ08225 711 aa2.54□□□□□ -2
SNX41YDR425W NKP1Q12493 238 aa2.54□□□□□ -2
SNX41YDR425W ADE6P38972 1358 aaKnown RBP2.54□□□□□ -2
SNX41YDR425W TY1B-AO13527 1196 aaKnown RBP2.54□□□□□ -2
SNX41YDR425W TY2A-LR1P0C2J4 438 aa2.54□□□□□ -2
SNX41YDR425W TY2A-FP0CX61 438 aa2.54□□□□□ -2
SNX41YDR425W TY2A-GR2P0CX62 438 aa2.54□□□□□ -2
SNX41YDR425W TY2A-CP25383 438 aa2.54□□□□□ -2
SNX41YDR425W PAP1P29468 568 aaKnown RBP2.54□□□□□ -2
SNX41YDR425W RAD16P31244 790 aa2.54□□□□□ -2
SNX41YDR425W LOS1P33418 1100 aaPredicted RBP2.54□□□□□ -2
SNX41YDR425W SEC66P33754 206 aa2.54□□□□□ -2
SNX41YDR425W NTR2P36118 322 aaPredicted RBP2.54□□□□□ -2
SNX41YDR425W KTR3P38130 404 aaPredicted RBP2.54□□□□□ -2
SNX41YDR425W EFM2P38347 419 aa2.54□□□□□ -2
SNX41YDR425W SEC31P38968 1273 aaKnown RBP2.54□□□□□ -2
SNX41YDR425W YAT2P40017 923 aa2.54□□□□□ -2
SNX41YDR425W YIL001WP40560 513 aa2.54□□□□□ -2
SNX41YDR425W SWP82P43554 623 aa2.54□□□□□ -2
SNX41YDR425W CTK2P46962 323 aa2.54□□□□□ -2
SNX41YDR425W ADA2Q02336 434 aa2.54□□□□□ -2
SNX41YDR425W TY2A-DR2Q03483 438 aa2.54□□□□□ -2
SNX41YDR425W GRS2Q06817 618 aa2.54□□□□□ -2
SNX41YDR425W NOP6Q07623 225 aaKnown RBP2.54□□□□□ -2
SNX41YDR425W APL5Q08951 932 aaKnown RBP2.54□□□□□ -2
SNX41YDR425W YLR049CQ12110 428 aa2.54□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms