RNA–Protein interactions for RNA: YDR213W

UPC2, Transcript of Sterol regulatory element binding protein, yeast

Gene UPC2, Length 2,742 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UPC2	YDR213W	TPK1	P06244	397 aa		4.25	□□□□□ -1.73
UPC2	YDR213W	TOP3	P13099	656 aa		4.25	□□□□□ -1.73
UPC2	YDR213W	CMK2	P22517	447 aa		4.25	□□□□□ -1.73
UPC2	YDR213W	UTR2	P32623	467 aa		4.25	□□□□□ -1.73
UPC2	YDR213W	ABD1	P32783	436 aa	Predicted RBP	4.25	□□□□□ -1.73
UPC2	YDR213W	SEC61	P32915	480 aa		4.25	□□□□□ -1.73
UPC2	YDR213W	APT2	P36973	181 aa		4.25	□□□□□ -1.73
UPC2	YDR213W	IFA38	P38286	347 aa		4.25	□□□□□ -1.73
UPC2	YDR213W	BSD2	P38356	321 aa		4.25	□□□□□ -1.73
UPC2	YDR213W	IPI1	P38803	334 aa	Predicted RBP	4.25	□□□□□ -1.73
UPC2	YDR213W	MNN9	P39107	395 aa	Known RBP	4.25	□□□□□ -1.73
UPC2	YDR213W	CEM1	P39525	442 aa		4.25	□□□□□ -1.73
UPC2	YDR213W	YAT2	P40017	923 aa		4.25	□□□□□ -1.73
UPC2	YDR213W	TMA108	P40462	946 aa		4.25	□□□□□ -1.73
UPC2	YDR213W	YKE4	P40544	346 aa		4.25	□□□□□ -1.73
UPC2	YDR213W	ARF3	P40994	183 aa	RIP-Chip data	4.25	□□□□□ -1.73	not detected
UPC2	YDR213W	CCT7	P42943	550 aa	Known RBP	4.25	□□□□□ -1.73
UPC2	YDR213W	GCD14	P46959	383 aa	Predicted RBP	4.25	□□□□□ -1.73
UPC2	YDR213W	HOC1	P47124	396 aa		4.25	□□□□□ -1.73
UPC2	YDR213W	SSN8	P47821	323 aa		4.25	□□□□□ -1.73
UPC2	YDR213W	HLJ1	P48353	224 aa		4.25	□□□□□ -1.73
UPC2	YDR213W	LYS4	P49367	693 aa	Predicted RBP	4.25	□□□□□ -1.73
UPC2	YDR213W	TPN1	P53099	579 aa		4.25	□□□□□ -1.73
UPC2	YDR213W	MPS2	P53159	387 aa		4.25	□□□□□ -1.73
UPC2	YDR213W	YNL010W	P53981	241 aa	Known RBP	4.25	□□□□□ -1.73
UPC2	YDR213W	GPD1	Q00055	391 aa	Known RBP	4.25	□□□□□ -1.73
UPC2	YDR213W	ENT5	Q03769	411 aa	Known RBP	4.25	□□□□□ -1.73
UPC2	YDR213W	TIF35	Q04067	274 aa	Known RBP	4.25	□□□□□ -1.73
UPC2	YDR213W	PEX12	Q04370	399 aa		4.25	□□□□□ -1.73
UPC2	YDR213W	MDM32	Q12171	622 aa		4.25	□□□□□ -1.73
UPC2	YDR213W	RTR2	Q12378	196 aa		4.25	□□□□□ -1.73
UPC2	YDR213W	MSS18	P08593	268 aa		4.25	□□□□□ -1.73
UPC2	YDR213W	CDC42	P19073	191 aa		4.25	□□□□□ -1.73
UPC2	YDR213W	VMA3	P25515	160 aa		4.25	□□□□□ -1.73
UPC2	YDR213W	YCL068C	P25593	260 aa		4.25	□□□□□ -1.73
UPC2	YDR213W	PTC6	P25646	442 aa		4.25	□□□□□ -1.73
UPC2	YDR213W	URA10	P30402	227 aa		4.25	□□□□□ -1.73
UPC2	YDR213W	YHK8	P38776	514 aa		4.25	□□□□□ -1.73
UPC2	YDR213W	IML2	P47031	731 aa		4.25	□□□□□ -1.73
UPC2	YDR213W	RTA1	P53047	317 aa		4.25	□□□□□ -1.73
UPC2	YDR213W	SLD3	P53135	668 aa		4.25	□□□□□ -1.73
UPC2	YDR213W	LSC1	P53598	329 aa	Known RBP	4.25	□□□□□ -1.73
UPC2	YDR213W	RPL6A	Q02326	176 aa	Known RBP	4.25	□□□□□ -1.73
UPC2	YDR213W	MUK1	Q02866	612 aa		4.25	□□□□□ -1.73
UPC2	YDR213W	THI7	Q05998	598 aa		4.25	□□□□□ -1.73
UPC2	YDR213W	DBP9	Q06218	594 aa	Known RBP	4.25	□□□□□ -1.73
UPC2	YDR213W	CUE5	Q08412	411 aa	Known RBP	4.25	□□□□□ -1.73
UPC2	YDR213W	WRS1	Q12109	432 aa	Known RBP	4.25	□□□□□ -1.73
UPC2	YDR213W	ERR1	P0CX10	437 aa		4.24	□□□□□ -1.73
UPC2	YDR213W	ERR2	P0CX11	437 aa		4.24	□□□□□ -1.73
UPC2	YDR213W	GAL3	P13045	520 aa		4.24	□□□□□ -1.73
UPC2	YDR213W	OCA4	P25366	362 aa		4.24	□□□□□ -1.73
UPC2	YDR213W	PPZ1	P26570	692 aa		4.24	□□□□□ -1.73
UPC2	YDR213W	PAH1	P32567	862 aa		4.24	□□□□□ -1.73
UPC2	YDR213W	ATG19	P35193	415 aa		4.24	□□□□□ -1.73
UPC2	YDR213W	YKL063C	P35725	167 aa		4.24	□□□□□ -1.73
UPC2	YDR213W	GPX2	P38143	162 aa		4.24	□□□□□ -1.73
UPC2	YDR213W	GPB2	P39717	880 aa		4.24	□□□□□ -1.73
UPC2	YDR213W	YEL020C	P39994	560 aa		4.24	□□□□□ -1.73
UPC2	YDR213W	ARG2	P40360	574 aa		4.24	□□□□□ -1.73
UPC2	YDR213W	MAL11	P53048	616 aa		4.24	□□□□□ -1.73
UPC2	YDR213W	FMP48	P53233	369 aa		4.24	□□□□□ -1.73
UPC2	YDR213W	RTS3	P53289	263 aa		4.24	□□□□□ -1.73
UPC2	YDR213W	ARC35	P53731	342 aa	Known RBP	4.24	□□□□□ -1.73
UPC2	YDR213W	NHX1	Q04121	633 aa		4.24	□□□□□ -1.73
UPC2	YDR213W	HFI1	Q12060	488 aa		4.24	□□□□□ -1.73
UPC2	YDR213W	ECM3	Q99252	613 aa		4.24	□□□□□ -1.73
UPC2	YDR213W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
UPC2	YDR213W	UTR4	P32626	227 aa		4.24	□□□□□ -1.73
UPC2	YDR213W	FRE1	P32791	686 aa		4.24	□□□□□ -1.73
UPC2	YDR213W	PGM1	P33401	570 aa	Known RBP	4.24	□□□□□ -1.73
UPC2	YDR213W	UBP11	P36026	717 aa		4.24	□□□□□ -1.73
UPC2	YDR213W	SKG1	P36169	355 aa		4.24	□□□□□ -1.73
UPC2	YDR213W	CYC2	P38909	366 aa		4.24	□□□□□ -1.73
UPC2	YDR213W	FAD1	P38913	306 aa		4.24	□□□□□ -1.73
UPC2	YDR213W	MNN1	P39106	762 aa		4.24	□□□□□ -1.73
UPC2	YDR213W	IES5	P40060	125 aa		4.24	□□□□□ -1.73
UPC2	YDR213W	SER2	P42941	309 aa		4.24	□□□□□ -1.73
UPC2	YDR213W	PTR3	P43606	678 aa		4.24	□□□□□ -1.73
UPC2	YDR213W	ARC1	P46672	376 aa	Known RBP	4.24	□□□□□ -1.73
UPC2	YDR213W	SNF12	P53628	566 aa		4.24	□□□□□ -1.73
UPC2	YDR213W	ARP10	Q04549	284 aa		4.24	□□□□□ -1.73
UPC2	YDR213W	KAP95	Q06142	861 aa	Known RBP	4.24	□□□□□ -1.73
UPC2	YDR213W	YPR172W	Q06608	200 aa		4.24	□□□□□ -1.73
UPC2	YDR213W	RSC3	Q06639	885 aa		4.24	□□□□□ -1.73
UPC2	YDR213W	YDL124W	Q07551	312 aa	Known RBP	4.24	□□□□□ -1.73
UPC2	YDR213W	YDR061W	Q12298	539 aa		4.24	□□□□□ -1.73
UPC2	YDR213W	AVL9	Q12500	764 aa		4.24	□□□□□ -1.73
UPC2	YDR213W	HSH49	Q99181	213 aa	Predicted RBP	4.24	□□□□□ -1.73
UPC2	YDR213W	MED11	Q99278	115 aa		4.24	□□□□□ -1.73
UPC2	YDR213W	PMD1	P32634	1753 aa		4.24	□□□□□ -1.73
UPC2	YDR213W	SUC2	P00724	532 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	IMA3	P0CW40	589 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	IMA4	P0CW41	589 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	INO1	P11986	533 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	UGA1	P17649	471 aa		4.23	□□□□□ -1.73
UPC2	YDR213W	DBP3	P20447	523 aa	Known RBP	4.23	□□□□□ -1.73
UPC2	YDR213W	YCK2	P23292	546 aa	Known RBP	4.23	□□□□□ -1.73
UPC2	YDR213W	SEC1	P30619	724 aa	Known RBP	4.23	□□□□□ -1.73
UPC2	YDR213W	YSC83	P32792	385 aa		4.23	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms