RNA–Protein interactions for RNA: YDR146C

SWI5, Transcript of Transcription factor that recruits Mediator and Swi/Snf complexes, yeastyeast

Gene SWI5, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI5YDR146C YIH1P25637 258 aa1.87□□□□□ -2.11
SWI5YDR146C SEC1P30619 724 aaKnown RBP1.87□□□□□ -2.11
SWI5YDR146C TIF3P34167 436 aaKnown RBP1.87□□□□□ -2.11
SWI5YDR146C NOP4P37838 685 aaKnown RBP1.87□□□□□ -2.11
SWI5YDR146C MET30P39014 640 aa1.87□□□□□ -2.11
SWI5YDR146C YIL169CP40442 995 aa1.87□□□□□ -2.11
SWI5YDR146C MRX6P48564 524 aa1.87□□□□□ -2.11
SWI5YDR146C HOS2P53096 452 aaPredicted RBP1.87□□□□□ -2.11
SWI5YDR146C LSC1P53598 329 aaKnown RBP1.87□□□□□ -2.11
SWI5YDR146C DIG1Q03063 452 aaKnown RBP1.87□□□□□ -2.11
SWI5YDR146C YLR281CQ05863 155 aa1.87□□□□□ -2.11
SWI5YDR146C LUC7Q07508 261 aaPredicted RBP1.87□□□□□ -2.11
SWI5YDR146C GRC3Q07845 632 aa1.87□□□□□ -2.11
SWI5YDR146C TEN1Q07921 160 aa1.87□□□□□ -2.11
SWI5YDR146C YPT6Q99260 215 aa1.87□□□□□ -2.11
SWI5YDR146C SNF3P10870 884 aa1.86□□□□□ -2.11
SWI5YDR146C PMS1P14242 873 aa1.86□□□□□ -2.11
SWI5YDR146C RPB8P20436 146 aa1.86□□□□□ -2.11
SWI5YDR146C SPE2P21182 396 aa1.86□□□□□ -2.11
SWI5YDR146C PRE8P23639 250 aa1.86□□□□□ -2.11
SWI5YDR146C SSE2P32590 693 aaKnown RBP1.86□□□□□ -2.11
SWI5YDR146C YKL100CP34248 587 aa1.86□□□□□ -2.11
SWI5YDR146C STV1P37296 890 aa1.86□□□□□ -2.11
SWI5YDR146C DBP8P38719 431 aa1.86□□□□□ -2.11
SWI5YDR146C TMA108P40462 946 aa1.86□□□□□ -2.11
SWI5YDR146C FAR3P46671 204 aa1.86□□□□□ -2.11
SWI5YDR146C DSD1P53095 428 aa1.86□□□□□ -2.11
SWI5YDR146C VPS75P53853 264 aa1.86□□□□□ -2.11
SWI5YDR146C SMA1Q02651 245 aa1.86□□□□□ -2.11
SWI5YDR146C EMI2Q04409 500 aaKnown RBP1.86□□□□□ -2.11
SWI5YDR146C DPB4Q04603 196 aaKnown RBP1.86□□□□□ -2.11
SWI5YDR146C YEH1Q07804 573 aa1.86□□□□□ -2.11
SWI5YDR146C MF(ALPHA)1P01149 165 aa1.85□□□□□ -2.11
SWI5YDR146C ARG81P05085 880 aa1.85□□□□□ -2.11
SWI5YDR146C BAR1P12630 587 aa1.85□□□□□ -2.11
SWI5YDR146C HNM1P19807 563 aa1.85□□□□□ -2.11
SWI5YDR146C ELO2P25358 347 aa1.85□□□□□ -2.11
SWI5YDR146C YBL029WP38201 376 aa1.85□□□□□ -2.11
SWI5YDR146C RKM3P38222 552 aa1.85□□□□□ -2.11
SWI5YDR146C LCL3P53153 274 aa1.85□□□□□ -2.11
SWI5YDR146C YVH1Q02256 364 aaKnown RBP1.85□□□□□ -2.11
SWI5YDR146C CTI6Q08923 506 aa1.85□□□□□ -2.11
SWI5YDR146C FMP40Q08968 688 aaPredicted RBP1.85□□□□□ -2.11
SWI5YDR146C MED1Q12321 566 aa1.85□□□□□ -2.11
SWI5YDR146C IMG1P25626 169 aa1.85□□□□□ -2.11
SWI5YDR146C YUR1P26725 428 aa1.85□□□□□ -2.11
SWI5YDR146C RAD24P32641 659 aa1.85□□□□□ -2.11
SWI5YDR146C YBR144CP34215 104 aa1.85□□□□□ -2.11
SWI5YDR146C PHD1P36093 366 aa1.85□□□□□ -2.11
SWI5YDR146C MUM2P38236 366 aa1.85□□□□□ -2.11
SWI5YDR146C YBR225WP38321 900 aa1.85□□□□□ -2.11
SWI5YDR146C ERG7P38604 731 aa1.85□□□□□ -2.11
SWI5YDR146C NPR2P39923 615 aa1.85□□□□□ -2.11
SWI5YDR146C VRG4P40107 337 aa1.85□□□□□ -2.11
SWI5YDR146C YIR014WP40570 242 aa1.85□□□□□ -2.11
SWI5YDR146C ATG27P46989 271 aa1.85□□□□□ -2.11
SWI5YDR146C YNL234WP53857 426 aa1.85□□□□□ -2.11
SWI5YDR146C TIM10P87108 93 aa1.85□□□□□ -2.11
SWI5YDR146C RHO4Q00246 291 aa1.85□□□□□ -2.11
SWI5YDR146C RSM23Q01163 450 aa1.85□□□□□ -2.11
SWI5YDR146C YOR365CQ08844 703 aa1.85□□□□□ -2.11
SWI5YDR146C NDD1Q08887 554 aa1.85□□□□□ -2.11
SWI5YDR146C YJR112W-AQ3E743 109 aa1.85□□□□□ -2.11
SWI5YDR146C SEC53P07283 254 aaKnown RBP1.84□□□□□ -2.11
SWI5YDR146C MRP13P12686 339 aa1.84□□□□□ -2.11
SWI5YDR146C GFD2P25370 566 aaKnown RBP1.84□□□□□ -2.11
SWI5YDR146C PRD1P25375 712 aa1.84□□□□□ -2.11
SWI5YDR146C BOS1P25385 244 aa1.84□□□□□ -2.11
SWI5YDR146C CMK1P27466 446 aaKnown RBP1.84□□□□□ -2.11
SWI5YDR146C SNC1P31109 117 aa1.84□□□□□ -2.11
SWI5YDR146C LAG1P38703 411 aa1.84□□□□□ -2.11
SWI5YDR146C CUL3P53202 744 aa1.84□□□□□ -2.11
SWI5YDR146C YGR127WP53275 312 aa1.84□□□□□ -2.11
SWI5YDR146C SUB1P54000 292 aaKnown RBP1.84□□□□□ -2.11
SWI5YDR146C BUD22Q04347 519 aaKnown RBP1.84□□□□□ -2.11
SWI5YDR146C FMP42Q04991 504 aa1.84□□□□□ -2.11
SWI5YDR146C HCR1Q05775 265 aaKnown RBP1.84□□□□□ -2.11
SWI5YDR146C DIC1Q06143 298 aa1.84□□□□□ -2.11
SWI5YDR146C THI20Q08224 551 aa1.84□□□□□ -2.11
SWI5YDR146C RDR1Q08904 546 aa1.84□□□□□ -2.11
SWI5YDR146C HUA2Q12134 243 aa1.84□□□□□ -2.11
SWI5YDR146C ENT1Q12518 454 aa1.84□□□□□ -2.11
SWI5YDR146C SGS1P35187 1447 aa1.84□□□□□ -2.11
SWI5YDR146C PEP4P07267 405 aaKnown RBP1.84□□□□□ -2.12
SWI5YDR146C MRS3P10566 314 aa1.84□□□□□ -2.12
SWI5YDR146C TYR1P20049 452 aa1.84□□□□□ -2.12
SWI5YDR146C RPN2P32565 945 aaKnown RBP1.84□□□□□ -2.12
SWI5YDR146C LOS1P33418 1100 aaPredicted RBP1.84□□□□□ -2.12
SWI5YDR146C WBP1P33767 430 aaKnown RBP1.84□□□□□ -2.12
SWI5YDR146C YHR210CP38893 341 aa1.84□□□□□ -2.12
SWI5YDR146C YEL057CP39983 233 aa1.84□□□□□ -2.12
SWI5YDR146C ESL1P40456 1118 aa1.84□□□□□ -2.12
SWI5YDR146C SGN1P40561 250 aaKnown RBP RIP-Chip data1.84□□□□□ -2.12not detected
SWI5YDR146C MET28P40573 187 aa1.84□□□□□ -2.12
SWI5YDR146C AIM22P47051 409 aa1.84□□□□□ -2.12
SWI5YDR146C YJR154WP47181 346 aa1.84□□□□□ -2.12
SWI5YDR146C RPM2Q02773 1202 aa1.84□□□□□ -2.12
SWI5YDR146C YMR087WQ04299 284 aa1.84□□□□□ -2.12
SWI5YDR146C COQ9Q05779 260 aa1.84□□□□□ -2.12
SWI5YDR146C YLR352WQ06479 807 aa1.84□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms