RNA–Protein interactions for RNA: YDR097C

MSH6, Transcript of Protein required for mismatch repair in mitosis and meiosis, yeastyeast

Gene MSH6, Length 3,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH6YDR097C ULP2P40537 1034 aaPredicted RBP1.82□□□□□ -2.12
MSH6YDR097C MDE1P47095 244 aa1.82□□□□□ -2.12
MSH6YDR097C SLI1P53304 468 aa1.82□□□□□ -2.12
MSH6YDR097C PRP42Q03776 544 aaKnown RBP1.82□□□□□ -2.12
MSH6YDR097C ERB1Q04660 807 aaKnown RBP1.82□□□□□ -2.12
MSH6YDR097C CDC45Q08032 650 aa1.82□□□□□ -2.12
MSH6YDR097C YPR053CQ6Q5F3 151 aa1.82□□□□□ -2.12
MSH6YDR097C DFG16Q99234 619 aa1.82□□□□□ -2.12
MSH6YDR097C AMD2P22580 549 aa1.81□□□□□ -2.12
MSH6YDR097C GRR1P24814 1151 aa1.81□□□□□ -2.12
MSH6YDR097C POL12P38121 705 aaPredicted RBP1.81□□□□□ -2.12
MSH6YDR097C SEC31P38968 1273 aaKnown RBP1.81□□□□□ -2.12
MSH6YDR097C PLB1P39105 664 aa1.81□□□□□ -2.12
MSH6YDR097C UBX6P47049 396 aa1.81□□□□□ -2.12
MSH6YDR097C GPI8P49018 411 aa1.81□□□□□ -2.12
MSH6YDR097C ASE1P50275 885 aa1.81□□□□□ -2.12
MSH6YDR097C YGL117WP53133 265 aa1.81□□□□□ -2.12
MSH6YDR097C MNP1P53163 194 aaPredicted RBP1.81□□□□□ -2.12
MSH6YDR097C RIM8P53179 542 aa1.81□□□□□ -2.12
MSH6YDR097C RRP46P53256 223 aaPredicted RBP1.81□□□□□ -2.12
MSH6YDR097C CAF130P53280 1122 aaPredicted RBP1.81□□□□□ -2.12
MSH6YDR097C BUD22Q04347 519 aaKnown RBP1.81□□□□□ -2.12
MSH6YDR097C MED7Q08278 222 aa1.81□□□□□ -2.12
MSH6YDR097C GPM3Q12326 303 aa1.81□□□□□ -2.12
MSH6YDR097C TRM13Q12383 476 aa1.81□□□□□ -2.12
MSH6YDR097C CTF3Q12748 733 aa1.81□□□□□ -2.12
MSH6YDR097C MSS116P15424 664 aaKnown RBP1.81□□□□□ -2.12
MSH6YDR097C PRP2P20095 876 aaPredicted RBP1.81□□□□□ -2.12
MSH6YDR097C PUP3P25451 205 aaKnown RBP1.81□□□□□ -2.12
MSH6YDR097C YKL100CP34248 587 aa1.81□□□□□ -2.12
MSH6YDR097C LAS1P36146 502 aaPredicted RBP1.81□□□□□ -2.12
MSH6YDR097C YJL193WP39542 402 aa1.81□□□□□ -2.12
MSH6YDR097C YAP6Q03935 383 aa1.81□□□□□ -2.12
MSH6YDR097C YPT6Q99260 215 aa1.81□□□□□ -2.12
MSH6YDR097C DYN1P36022 4092 aa1.81□□□□□ -2.12
MSH6YDR097C SUC2P00724 532 aa1.81□□□□□ -2.12
MSH6YDR097C PDE2P06776 526 aa1.81□□□□□ -2.12
MSH6YDR097C GSY2P27472 705 aa1.81□□□□□ -2.12
MSH6YDR097C IDH2P28241 369 aaKnown RBP1.81□□□□□ -2.12
MSH6YDR097C MSP1P28737 362 aa1.81□□□□□ -2.12
MSH6YDR097C DIA4P38705 446 aaPredicted RBP1.81□□□□□ -2.12
MSH6YDR097C MIT1P40002 666 aa1.81□□□□□ -2.12
MSH6YDR097C STU2P46675 888 aa1.81□□□□□ -2.12
MSH6YDR097C MNN10P50108 393 aaKnown RBP1.81□□□□□ -2.12
MSH6YDR097C STR3P53101 465 aaKnown RBP1.81□□□□□ -2.12
MSH6YDR097C HRD3Q05787 833 aa1.81□□□□□ -2.12
MSH6YDR097C RAD34Q06665 692 aa1.81□□□□□ -2.12
MSH6YDR097C RXT3Q07458 294 aa1.81□□□□□ -2.12
MSH6YDR097C RCN2Q12044 265 aa1.81□□□□□ -2.12
MSH6YDR097C SFG1Q12507 346 aa1.81□□□□□ -2.12
MSH6YDR097C MLP1Q02455 1875 aaKnown RBP1.81□□□□□ -2.12
MSH6YDR097C NUM1Q00402 2748 aa1.8□□□□□ -2.12
MSH6YDR097C RPP0P05317 312 aaKnown RBP1.8□□□□□ -2.12
MSH6YDR097C ELO2P25358 347 aa1.8□□□□□ -2.12
MSH6YDR097C YMC2P38087 329 aa1.8□□□□□ -2.12
MSH6YDR097C FTH1P38310 465 aa1.8□□□□□ -2.12
MSH6YDR097C MLH1P38920 769 aa1.8□□□□□ -2.12
MSH6YDR097C ELO3P40319 345 aa1.8□□□□□ -2.12
MSH6YDR097C CCT7P42943 550 aaKnown RBP1.8□□□□□ -2.12
MSH6YDR097C SMC3P47037 1230 aa1.8□□□□□ -2.12
MSH6YDR097C PYK2P52489 506 aaKnown RBP1.8□□□□□ -2.12
MSH6YDR097C YGR079WP53249 370 aa1.8□□□□□ -2.12
MSH6YDR097C EFM6P53970 246 aa1.8□□□□□ -2.12
MSH6YDR097C CLU1Q03690 1277 aaKnown RBP1.8□□□□□ -2.12
MSH6YDR097C RAD33Q04231 177 aa1.8□□□□□ -2.12
MSH6YDR097C YDL144CQ07589 356 aa1.8□□□□□ -2.12
MSH6YDR097C YOR365CQ08844 703 aa1.8□□□□□ -2.12
MSH6YDR097C YPL216WQ08964 1102 aa1.8□□□□□ -2.12
MSH6YDR097C NTO1Q12311 748 aa1.8□□□□□ -2.12
MSH6YDR097C PDH1Q12428 516 aaKnown RBP1.8□□□□□ -2.12
MSH6YDR097C SEC39Q12745 709 aa1.8□□□□□ -2.12
MSH6YDR097C YJR112W-AQ3E743 109 aa1.8□□□□□ -2.12
MSH6YDR097C YKL033W-AQ86ZR7 236 aa1.8□□□□□ -2.12
MSH6YDR097C COX1P00401 534 aa1.8□□□□□ -2.12
MSH6YDR097C RPC40P07703 335 aaKnown RBP1.8□□□□□ -2.12
MSH6YDR097C DBP3P20447 523 aaKnown RBP1.8□□□□□ -2.12
MSH6YDR097C PWP1P21304 576 aaKnown RBP1.8□□□□□ -2.12
MSH6YDR097C CLB3P24870 427 aa1.8□□□□□ -2.12
MSH6YDR097C AAD3P25612 363 aa1.8□□□□□ -2.12
MSH6YDR097C HEL1P36113 551 aa1.8□□□□□ -2.12
MSH6YDR097C CCL1P37366 393 aa1.8□□□□□ -2.12
MSH6YDR097C ERC1P38767 581 aa1.8□□□□□ -2.12
MSH6YDR097C VPS41P38959 992 aa1.8□□□□□ -2.12
MSH6YDR097C SEC28P40509 296 aaKnown RBP1.8□□□□□ -2.12
MSH6YDR097C GLO1P50107 326 aa1.8□□□□□ -2.12
MSH6YDR097C DUG3P53871 357 aa1.8□□□□□ -2.12
MSH6YDR097C CTF4Q01454 927 aa1.8□□□□□ -2.12
MSH6YDR097C PEX25Q02969 394 aa1.8□□□□□ -2.12
MSH6YDR097C MTG1Q03151 367 aaPredicted RBP1.8□□□□□ -2.12
MSH6YDR097C CAC2Q04199 468 aa1.8□□□□□ -2.12
MSH6YDR097C BNA5Q05979 453 aa1.8□□□□□ -2.12
MSH6YDR097C KEL3Q08979 651 aaPredicted RBP1.8□□□□□ -2.12
MSH6YDR097C SPE3Q12074 293 aaKnown RBP1.8□□□□□ -2.12
MSH6YDR097C AI5_ALPHAQ9ZZX1 630 aa1.8□□□□□ -2.12
MSH6YDR097C PMD1P32634 1753 aa1.8□□□□□ -2.12
MSH6YDR097C RPS13P05756 151 aaKnown RBP1.8□□□□□ -2.12
MSH6YDR097C PPR1P07272 904 aaPredicted RBP1.8□□□□□ -2.12
MSH6YDR097C VMA2P16140 517 aaKnown RBP1.8□□□□□ -2.12
MSH6YDR097C CPR2P23285 205 aa1.8□□□□□ -2.12
MSH6YDR097C PMI40P29952 429 aaKnown RBP1.8□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms