RNA–Protein interactions for RNA: YDL231C

BRE4, Transcript of Zinc finger protein containing five transmembrane domains, yeast

Gene BRE4, Length 3,378 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BRE4	YDL231C	SUI3	P09064	285 aa	Known RBP	4.15	□□□□□ -1.74
BRE4	YDL231C	TUB1	P09733	447 aa	Known RBP	4.15	□□□□□ -1.74
BRE4	YDL231C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.74	not detected
BRE4	YDL231C	PHO3	P24031	467 aa		4.15	□□□□□ -1.74
BRE4	YDL231C	GEX1	P25596	615 aa		4.15	□□□□□ -1.74
BRE4	YDL231C	KAR9	P32526	644 aa		4.15	□□□□□ -1.74
BRE4	YDL231C	TFC3	P34111	1160 aa		4.15	□□□□□ -1.74
BRE4	YDL231C	GEX2	P36173	615 aa		4.15	□□□□□ -1.74
BRE4	YDL231C	HMT1	P38074	348 aa		4.15	□□□□□ -1.74
BRE4	YDL231C	POL12	P38121	705 aa	Predicted RBP	4.15	□□□□□ -1.74
BRE4	YDL231C	YFL052W	P43551	465 aa		4.15	□□□□□ -1.74
BRE4	YDL231C	SNG1	P46950	547 aa		4.15	□□□□□ -1.74
BRE4	YDL231C	AIM23	P47015	356 aa		4.15	□□□□□ -1.74
BRE4	YDL231C	YJR124C	P47159	448 aa		4.15	□□□□□ -1.74
BRE4	YDL231C	NBP35	P52920	328 aa		4.15	□□□□□ -1.74
BRE4	YDL231C	BUD32	P53323	261 aa		4.15	□□□□□ -1.74
BRE4	YDL231C	SPO20	Q04359	397 aa		4.15	□□□□□ -1.74
BRE4	YDL231C	YDR109C	Q04585	715 aa		4.15	□□□□□ -1.74
BRE4	YDL231C	DYN3	Q04949	312 aa		4.15	□□□□□ -1.74
BRE4	YDL231C	GLE1	Q12315	538 aa		4.15	□□□□□ -1.74
BRE4	YDL231C	TPK2	P06245	380 aa		4.15	□□□□□ -1.75
BRE4	YDL231C	PRP6	P19735	899 aa	Predicted RBP	4.15	□□□□□ -1.75
BRE4	YDL231C	MRPL8	P22353	238 aa		4.15	□□□□□ -1.75
BRE4	YDL231C	PPH22	P23595	377 aa		4.15	□□□□□ -1.75
BRE4	YDL231C	POL4	P25615	582 aa		4.15	□□□□□ -1.75
BRE4	YDL231C	KIP2	P28743	706 aa		4.15	□□□□□ -1.75
BRE4	YDL231C	MF(ALPHA)2	P32435	120 aa		4.15	□□□□□ -1.75
BRE4	YDL231C	CDC5	P32562	705 aa		4.15	□□□□□ -1.75
BRE4	YDL231C	DSS4	P32601	143 aa		4.15	□□□□□ -1.75
BRE4	YDL231C	ELO3	P40319	345 aa		4.15	□□□□□ -1.75
BRE4	YDL231C	SIP4	P46954	829 aa		4.15	□□□□□ -1.75
BRE4	YDL231C	GTR2	P53290	341 aa		4.15	□□□□□ -1.75
BRE4	YDL231C	ARC35	P53731	342 aa	Known RBP	4.15	□□□□□ -1.75
BRE4	YDL231C	PEX13	P80667	386 aa		4.15	□□□□□ -1.75
BRE4	YDL231C	SMA1	Q02651	245 aa		4.15	□□□□□ -1.75
BRE4	YDL231C	YKU80	Q04437	629 aa		4.15	□□□□□ -1.75
BRE4	YDL231C	YPR172W	Q06608	200 aa		4.15	□□□□□ -1.75
BRE4	YDL231C	WSC3	Q12215	556 aa		4.15	□□□□□ -1.75
BRE4	YDL231C	SLP1	Q12232	587 aa		4.15	□□□□□ -1.75
BRE4	YDL231C	HOM3	P10869	527 aa		4.14	□□□□□ -1.75
BRE4	YDL231C	UBC8	P28263	218 aa		4.14	□□□□□ -1.75
BRE4	YDL231C	UGP1	P32861	499 aa	Known RBP	4.14	□□□□□ -1.75
BRE4	YDL231C	BEM3	P32873	1128 aa		4.14	□□□□□ -1.75
BRE4	YDL231C	SWD1	P39706	426 aa		4.14	□□□□□ -1.75
BRE4	YDL231C	ARC1	P46672	376 aa	Known RBP	4.14	□□□□□ -1.75
BRE4	YDL231C	NUP84	P52891	726 aa		4.14	□□□□□ -1.75
BRE4	YDL231C	MNT2	P53059	558 aa		4.14	□□□□□ -1.75
BRE4	YDL231C	SPC105	P53148	917 aa		4.14	□□□□□ -1.75
BRE4	YDL231C	RPM2	Q02773	1202 aa		4.14	□□□□□ -1.75
BRE4	YDL231C	EMI1	Q04406	187 aa		4.14	□□□□□ -1.75
BRE4	YDL231C	YMR226C	Q05016	267 aa	Known RBP	4.14	□□□□□ -1.75
BRE4	YDL231C	HDA3	Q06623	655 aa		4.14	□□□□□ -1.75
BRE4	YDL231C	YLR012C	Q07927	99 aa		4.14	□□□□□ -1.75
BRE4	YDL231C	NDD1	Q08887	554 aa		4.14	□□□□□ -1.75
BRE4	YDL231C	CPA1	P07258	411 aa	Known RBP	4.14	□□□□□ -1.75
BRE4	YDL231C	KIN2	P13186	1147 aa	Known RBP	4.14	□□□□□ -1.75
BRE4	YDL231C	SCJ1	P25303	377 aa		4.14	□□□□□ -1.75
BRE4	YDL231C	RER1	P25560	188 aa		4.14	□□□□□ -1.75
BRE4	YDL231C	SYN8	P31377	255 aa		4.14	□□□□□ -1.75
BRE4	YDL231C	AEP1	P32493	518 aa		4.14	□□□□□ -1.75
BRE4	YDL231C	KAP104	P38217	918 aa	Known RBP	4.14	□□□□□ -1.75
BRE4	YDL231C	INM1	P38710	295 aa		4.14	□□□□□ -1.75
BRE4	YDL231C	MMF1	P40185	145 aa	Known RBP	4.14	□□□□□ -1.75
BRE4	YDL231C	JEM1	P40358	645 aa		4.14	□□□□□ -1.75
BRE4	YDL231C	YIL001W	P40560	513 aa		4.14	□□□□□ -1.75
BRE4	YDL231C	SGF73	P53165	657 aa		4.14	□□□□□ -1.75
BRE4	YDL231C	GND2	P53319	492 aa		4.14	□□□□□ -1.75
BRE4	YDL231C	IBD2	P53892	351 aa		4.14	□□□□□ -1.75
BRE4	YDL231C	IMP4	P53941	290 aa	Known RBP	4.14	□□□□□ -1.75
BRE4	YDL231C	VAM6	Q07468	1049 aa		4.14	□□□□□ -1.75
BRE4	YDL231C	MCH5	Q08777	521 aa		4.14	□□□□□ -1.75
BRE4	YDL231C	RPN6	Q12377	434 aa		4.14	□□□□□ -1.75
BRE4	YDL231C	UBA1	P22515	1024 aa	Known RBP	4.14	□□□□□ -1.75
BRE4	YDL231C	KRR1	P25586	316 aa	Predicted RBP	4.14	□□□□□ -1.75
BRE4	YDL231C	SBA1	P28707	216 aa	Known RBP	4.14	□□□□□ -1.75
BRE4	YDL231C	PEX3	P28795	441 aa		4.14	□□□□□ -1.75
BRE4	YDL231C	MET4	P32389	672 aa		4.14	□□□□□ -1.75
BRE4	YDL231C	VPS21	P36017	210 aa	Known RBP	4.14	□□□□□ -1.75
BRE4	YDL231C	SPC34	P36131	295 aa		4.14	□□□□□ -1.75
BRE4	YDL231C	YJL070C	P40361	888 aa		4.14	□□□□□ -1.75
BRE4	YDL231C	GTO1	P48239	356 aa		4.14	□□□□□ -1.75
BRE4	YDL231C	ARH1	P48360	493 aa		4.14	□□□□□ -1.75
BRE4	YDL231C	VEL1	P53058	206 aa		4.14	□□□□□ -1.75
BRE4	YDL231C	KXD1	P53158	218 aa		4.14	□□□□□ -1.75
BRE4	YDL231C	YNL140C	P53910	189 aa		4.14	□□□□□ -1.75
BRE4	YDL231C	RPC11	Q04307	110 aa	Predicted RBP	4.14	□□□□□ -1.75
BRE4	YDL231C	GAD1	Q04792	585 aa		4.14	□□□□□ -1.75
BRE4	YDL231C	RTN1	Q04947	295 aa	Known RBP	4.14	□□□□□ -1.75
BRE4	YDL231C	ATG10	Q07879	167 aa		4.14	□□□□□ -1.75
BRE4	YDL231C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
BRE4	YDL231C	ATO2	P32907	282 aa		4.13	□□□□□ -1.75
BRE4	YDL231C	COS111	P38308	924 aa		4.13	□□□□□ -1.75
BRE4	YDL231C	SSZ1	P38788	538 aa	Known RBP	4.13	□□□□□ -1.75
BRE4	YDL231C	SFB3	P38810	929 aa		4.13	□□□□□ -1.75
BRE4	YDL231C	GGA2	P38817	585 aa	Known RBP	4.13	□□□□□ -1.75
BRE4	YDL231C	RGI1	P40043	161 aa	Predicted RBP	4.13	□□□□□ -1.75
BRE4	YDL231C	CAB2	P40506	365 aa		4.13	□□□□□ -1.75
BRE4	YDL231C	RPL34B	P40525	121 aa	Known RBP	4.13	□□□□□ -1.75
BRE4	YDL231C	IST3	P40565	148 aa	Predicted RBP	4.13	□□□□□ -1.75
BRE4	YDL231C	YJL049W	P47048	450 aa		4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 8 ms