RNA–Protein interactions for RNA: YDL228C

YDL228C, Transcript of Dubious open reading frame, yeast

Gene YDL228C, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDL228C	YDL228C	PHO3	P24031	467 aa		4.07	□□□□□ -1.76
YDL228C	YDL228C	ERG6	P25087	383 aa	Known RBP	4.07	□□□□□ -1.76
YDL228C	YDL228C	SNT1	P25357	1226 aa		4.07	□□□□□ -1.76
YDL228C	YDL228C	URA7	P28274	579 aa	Known RBP	4.07	□□□□□ -1.76
YDL228C	YDL228C	BEM1	P29366	551 aa		4.07	□□□□□ -1.76
YDL228C	YDL228C	DUT1	P33317	147 aa		4.07	□□□□□ -1.76
YDL228C	YDL228C	CTF13	P35203	478 aa		4.07	□□□□□ -1.76
YDL228C	YDL228C	LRG1	P35688	1017 aa		4.07	□□□□□ -1.76
YDL228C	YDL228C	LDB7	P38210	180 aa		4.07	□□□□□ -1.76
YDL228C	YDL228C	CYC2	P38909	366 aa		4.07	□□□□□ -1.76
YDL228C	YDL228C	ERV46	P39727	415 aa		4.07	□□□□□ -1.76
YDL228C	YDL228C	ALG8	P40351	577 aa		4.07	□□□□□ -1.76
YDL228C	YDL228C	IRR1	P40541	1150 aa		4.07	□□□□□ -1.76
YDL228C	YDL228C	DSN1	P40568	576 aa		4.07	□□□□□ -1.76
YDL228C	YDL228C	GTS1	P40956	396 aa		4.07	□□□□□ -1.76
YDL228C	YDL228C	MAD1	P40957	749 aa		4.07	□□□□□ -1.76
YDL228C	YDL228C	ARP4	P80428	489 aa		4.07	□□□□□ -1.76
YDL228C	YDL228C	NHX1	Q04121	633 aa		4.07	□□□□□ -1.76
YDL228C	YDL228C	EMI1	Q04406	187 aa		4.07	□□□□□ -1.76
YDL228C	YDL228C	YML096W	Q04489	525 aa		4.07	□□□□□ -1.76
YDL228C	YDL228C	GSF2	Q04697	403 aa	Known RBP	4.07	□□□□□ -1.76
YDL228C	YDL228C	ARG7	Q04728	441 aa		4.07	□□□□□ -1.76
YDL228C	YDL228C	CIA1	Q05583	330 aa		4.07	□□□□□ -1.76
YDL228C	YDL228C	EAF1	Q06337	982 aa		4.07	□□□□□ -1.76
YDL228C	YDL228C	TRM8	Q12009	286 aa		4.07	□□□□□ -1.76
YDL228C	YDL228C	VPS68	Q12016	184 aa		4.07	□□□□□ -1.76
YDL228C	YDL228C	HOS1	Q12214	470 aa		4.07	□□□□□ -1.76
YDL228C	YDL228C	PEP5	P12868	1029 aa		4.06	□□□□□ -1.76
YDL228C	YDL228C	HEM15	P16622	393 aa		4.06	□□□□□ -1.76
YDL228C	YDL228C	VPS34	P22543	875 aa		4.06	□□□□□ -1.76
YDL228C	YDL228C	YSR3	P23501	404 aa		4.06	□□□□□ -1.76
YDL228C	YDL228C	YCR099C	P25657	155 aa		4.06	□□□□□ -1.76
YDL228C	YDL228C	DPB3	P27344	201 aa		4.06	□□□□□ -1.76
YDL228C	YDL228C	PLC1	P32383	869 aa		4.06	□□□□□ -1.76
YDL228C	YDL228C	SFP1	P32432	683 aa		4.06	□□□□□ -1.76
YDL228C	YDL228C	SPR1	P32603	445 aa		4.06	□□□□□ -1.76
YDL228C	YDL228C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
YDL228C	YDL228C	CNS1	P33313	385 aa		4.06	□□□□□ -1.76
YDL228C	YDL228C	TFC3	P34111	1160 aa		4.06	□□□□□ -1.76
YDL228C	YDL228C	YKL077W	P36081	392 aa		4.06	□□□□□ -1.76
YDL228C	YDL228C	GMH1	P36125	273 aa		4.06	□□□□□ -1.76
YDL228C	YDL228C	MRP21	P38175	177 aa		4.06	□□□□□ -1.76
YDL228C	YDL228C	DBP8	P38719	431 aa		4.06	□□□□□ -1.76
YDL228C	YDL228C	YHI9	P38765	294 aa		4.06	□□□□□ -1.76
YDL228C	YDL228C	CCT4	P39078	528 aa	Known RBP	4.06	□□□□□ -1.76
YDL228C	YDL228C	DUG1	P43616	481 aa	Known RBP	4.06	□□□□□ -1.76
YDL228C	YDL228C	SAE2	P46946	345 aa		4.06	□□□□□ -1.76
YDL228C	YDL228C	TY4A-J	P47023	414 aa		4.06	□□□□□ -1.76
YDL228C	YDL228C	RTA1	P53047	317 aa		4.06	□□□□□ -1.76
YDL228C	YDL228C	NRM1	P53718	249 aa		4.06	□□□□□ -1.76
YDL228C	YDL228C	NOP15	P53927	220 aa	Predicted RBP	4.06	□□□□□ -1.76
YDL228C	YDL228C	HXT15	P54854	567 aa		4.06	□□□□□ -1.76
YDL228C	YDL228C	ECM9	Q02202	377 aa		4.06	□□□□□ -1.76
YDL228C	YDL228C	TFB2	Q02939	513 aa		4.06	□□□□□ -1.76
YDL228C	YDL228C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
YDL228C	YDL228C	THI73	Q07904	523 aa		4.06	□□□□□ -1.76
YDL228C	YDL228C	CUE5	Q08412	411 aa	Known RBP	4.06	□□□□□ -1.76
YDL228C	YDL228C	UPC2	Q12151	913 aa		4.06	□□□□□ -1.76
YDL228C	YDL228C	PHO5	P00635	467 aa		4.05	□□□□□ -1.76
YDL228C	YDL228C	FUM1	P08417	488 aa	Known RBP	4.05	□□□□□ -1.76
YDL228C	YDL228C	RPB2	P08518	1224 aa	Known RBP	4.05	□□□□□ -1.76
YDL228C	YDL228C	GCD1	P09032	578 aa	Predicted RBP	4.05	□□□□□ -1.76
YDL228C	YDL228C	SBP1	P10080	294 aa	Known RBP	4.05	□□□□□ -1.76
YDL228C	YDL228C	NSP1	P14907	823 aa	Known RBP	4.05	□□□□□ -1.76
YDL228C	YDL228C	POL30	P15873	258 aa	Known RBP	4.05	□□□□□ -1.76
YDL228C	YDL228C	PHO84	P25297	587 aa	Known RBP	4.05	□□□□□ -1.76
YDL228C	YDL228C	RNQ1	P25367	405 aa		4.05	□□□□□ -1.76
YDL228C	YDL228C	URA10	P30402	227 aa		4.05	□□□□□ -1.76
YDL228C	YDL228C	STN1	P38960	494 aa		4.05	□□□□□ -1.76
YDL228C	YDL228C	CCT6	P39079	546 aa		4.05	□□□□□ -1.76
YDL228C	YDL228C	ELO1	P39540	310 aa		4.05	□□□□□ -1.76
YDL228C	YDL228C	PXA1	P41909	870 aa		4.05	□□□□□ -1.76
YDL228C	YDL228C	ZIM17	P42844	174 aa		4.05	□□□□□ -1.76
YDL228C	YDL228C	MRPS18	P42847	217 aa		4.05	□□□□□ -1.76
YDL228C	YDL228C	HXT16	P47185	567 aa		4.05	□□□□□ -1.76
YDL228C	YDL228C	YGL108C	P53139	140 aa		4.05	□□□□□ -1.76
YDL228C	YDL228C	PEX8	P53248	589 aa		4.05	□□□□□ -1.76
YDL228C	YDL228C	CPR6	P53691	371 aa	Known RBP	4.05	□□□□□ -1.76
YDL228C	YDL228C	EFM6	P53970	246 aa		4.05	□□□□□ -1.76
YDL228C	YDL228C	RPL22B	P56628	122 aa	Known RBP	4.05	□□□□□ -1.76
YDL228C	YDL228C	PET117	Q02771	107 aa		4.05	□□□□□ -1.76
YDL228C	YDL228C	ARX1	Q03862	593 aa	Known RBP	4.05	□□□□□ -1.76
YDL228C	YDL228C	RPN9	Q04062	393 aa	Known RBP	4.05	□□□□□ -1.76
YDL228C	YDL228C	ADE13	Q05911	482 aa	Known RBP	4.05	□□□□□ -1.76
YDL228C	YDL228C	MRL1	Q06815	381 aa		4.05	□□□□□ -1.76
YDL228C	YDL228C	PLB3	Q08108	686 aa		4.05	□□□□□ -1.76
YDL228C	YDL228C	HRK1	Q08732	759 aa	Known RBP	4.05	□□□□□ -1.76
YDL228C	YDL228C	BUD7	Q08754	746 aa		4.05	□□□□□ -1.76
YDL228C	YDL228C	PFA4	Q12006	378 aa		4.05	□□□□□ -1.76
YDL228C	YDL228C	STE2	D6VTK4	431 aa		4.04	□□□□□ -1.76
YDL228C	YDL228C	GAL4	P04386	881 aa		4.04	□□□□□ -1.76
YDL228C	YDL228C	CPA1	P07258	411 aa	Known RBP	4.04	□□□□□ -1.76
YDL228C	YDL228C	RED1	P14291	827 aa		4.04	□□□□□ -1.76
YDL228C	YDL228C	SPO16	P17122	198 aa		4.04	□□□□□ -1.76
YDL228C	YDL228C	HSP60	P19882	572 aa	Known RBP	4.04	□□□□□ -1.76
YDL228C	YDL228C	SCL1	P21243	252 aa	Known RBP	4.04	□□□□□ -1.76
YDL228C	YDL228C	ATP12	P22135	325 aa		4.04	□□□□□ -1.76
YDL228C	YDL228C	COQ2	P32378	372 aa		4.04	□□□□□ -1.76
YDL228C	YDL228C	YEL043W	P32618	956 aa		4.04	□□□□□ -1.76
YDL228C	YDL228C	PRP18	P33411	251 aa	Predicted RBP	4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms