RNA–Protein interactions for RNA: YDL201W

TRM8, Transcript of Noncatalytic subunit of a tRNA methyltransferase complex, yeast

Gene TRM8, Length 861 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM8	YDL201W	HCS1	P34243	683 aa		4.81	□□□□□ -1.64
TRM8	YDL201W	PIM1	P36775	1133 aa		4.81	□□□□□ -1.64
TRM8	YDL201W	MAL33	P38157	468 aa		4.81	□□□□□ -1.64
TRM8	YDL201W	TCD1	P38756	429 aa		4.81	□□□□□ -1.64
TRM8	YDL201W	KEL1	P38853	1164 aa	Known RBP	4.81	□□□□□ -1.64
TRM8	YDL201W	NUP60	P39705	539 aa		4.81	□□□□□ -1.64
TRM8	YDL201W	FUN12	P39730	1002 aa	Known RBP	4.81	□□□□□ -1.64
TRM8	YDL201W	AIM10	P39965	576 aa	Known RBP	4.81	□□□□□ -1.64
TRM8	YDL201W	YFL054C	P43549	646 aa		4.81	□□□□□ -1.64
TRM8	YDL201W	SSY5	P47002	699 aa		4.81	□□□□□ -1.64
TRM8	YDL201W	APT1	P49435	187 aa	Known RBP	4.81	□□□□□ -1.64
TRM8	YDL201W	HOP2	P53187	214 aa		4.81	□□□□□ -1.64
TRM8	YDL201W	YGR054W	P53235	642 aa	Known RBP	4.81	□□□□□ -1.64
TRM8	YDL201W	LEE1	Q02799	301 aa	Known RBP	4.81	□□□□□ -1.64
TRM8	YDL201W	YDR239C	Q03780	787 aa		4.81	□□□□□ -1.64
TRM8	YDL201W	ARX1	Q03862	593 aa	Known RBP	4.81	□□□□□ -1.64
TRM8	YDL201W	RPN9	Q04062	393 aa	Known RBP	4.81	□□□□□ -1.64
TRM8	YDL201W	ECM18	Q04623	453 aa		4.81	□□□□□ -1.64
TRM8	YDL201W	VPS38	Q05919	439 aa		4.81	□□□□□ -1.64
TRM8	YDL201W	YLR413W	Q06689	675 aa		4.81	□□□□□ -1.64
TRM8	YDL201W	MDM36	Q06820	579 aa		4.81	□□□□□ -1.64
TRM8	YDL201W	RRT8	Q08219	342 aa		4.81	□□□□□ -1.64
TRM8	YDL201W	TMA16	Q08687	178 aa		4.81	□□□□□ -1.64
TRM8	YDL201W	SLM3	Q12093	417 aa		4.81	□□□□□ -1.64
TRM8	YDL201W	UBX3	Q12229	455 aa		4.81	□□□□□ -1.64
TRM8	YDL201W	ISN1	Q99312	450 aa		4.81	□□□□□ -1.64
TRM8	YDL201W	TDH1	P00360	332 aa	Known RBP	4.8	□□□□□ -1.64
TRM8	YDL201W	CBP2	P03874	630 aa	Predicted RBP	4.8	□□□□□ -1.64
TRM8	YDL201W	ADE2	P21264	571 aa	Known RBP	4.8	□□□□□ -1.64
TRM8	YDL201W	ERG6	P25087	383 aa	Known RBP	4.8	□□□□□ -1.64
TRM8	YDL201W	DMC1	P25453	334 aa		4.8	□□□□□ -1.64
TRM8	YDL201W	YIH1	P25637	258 aa		4.8	□□□□□ -1.64
TRM8	YDL201W	GLG1	P36143	616 aa		4.8	□□□□□ -1.64
TRM8	YDL201W	RRT2	P38332	387 aa		4.8	□□□□□ -1.64
TRM8	YDL201W	JHD1	P40034	492 aa		4.8	□□□□□ -1.64
TRM8	YDL201W	YTA12	P40341	825 aa		4.8	□□□□□ -1.64
TRM8	YDL201W	VMA13	P41807	478 aa	Known RBP	4.8	□□□□□ -1.64
TRM8	YDL201W	RAD17	P48581	401 aa		4.8	□□□□□ -1.64
TRM8	YDL201W	INN1	P53901	409 aa		4.8	□□□□□ -1.64
TRM8	YDL201W	BOP3	P53958	396 aa		4.8	□□□□□ -1.64
TRM8	YDL201W	RPA49	Q01080	415 aa	Predicted RBP	4.8	□□□□□ -1.64
TRM8	YDL201W	YML037C	Q03703	340 aa		4.8	□□□□□ -1.64
TRM8	YDL201W	INP2	Q03824	705 aa		4.8	□□□□□ -1.64
TRM8	YDL201W	ATC1	Q04005	294 aa		4.8	□□□□□ -1.64
TRM8	YDL201W	SEG1	Q04279	960 aa		4.8	□□□□□ -1.64
TRM8	YDL201W	BUD22	Q04347	519 aa	Known RBP	4.8	□□□□□ -1.64
TRM8	YDL201W	ARR1	Q06596	294 aa		4.8	□□□□□ -1.64
TRM8	YDL201W	YFH1	Q07540	174 aa		4.8	□□□□□ -1.64
TRM8	YDL201W	MED2	Q12124	431 aa		4.8	□□□□□ -1.64
TRM8	YDL201W	LEU9	Q12166	604 aa	Known RBP	4.8	□□□□□ -1.64
TRM8	YDL201W	SVS1	Q12254	260 aa		4.8	□□□□□ -1.64
TRM8	YDL201W	GPR1	Q12361	961 aa		4.8	□□□□□ -1.64
TRM8	YDL201W	RAD61	Q99359	647 aa		4.8	□□□□□ -1.64
TRM8	YDL201W	PET111	P08468	800 aa		4.79	□□□□□ -1.64
TRM8	YDL201W	KIN82	P25341	720 aa		4.79	□□□□□ -1.64
TRM8	YDL201W	RPS7A	P26786	190 aa	Known RBP	4.79	□□□□□ -1.64
TRM8	YDL201W	PRE4	P30657	266 aa		4.79	□□□□□ -1.64
TRM8	YDL201W	NDI1	P32340	513 aa		4.79	□□□□□ -1.64
TRM8	YDL201W	SEC66	P33754	206 aa		4.79	□□□□□ -1.64
TRM8	YDL201W	TOD6	P34219	525 aa		4.79	□□□□□ -1.64
TRM8	YDL201W	ATP3	P38077	311 aa	Known RBP	4.79	□□□□□ -1.64
TRM8	YDL201W	MNN9	P39107	395 aa	Known RBP	4.79	□□□□□ -1.64
TRM8	YDL201W	PZF1	P39933	429 aa		4.79	□□□□□ -1.64
TRM8	YDL201W	YJL070C	P40361	888 aa		4.79	□□□□□ -1.64
TRM8	YDL201W	HXT14	P42833	540 aa		4.79	□□□□□ -1.64
TRM8	YDL201W	MTG1	Q03151	367 aa	Predicted RBP	4.79	□□□□□ -1.64
TRM8	YDL201W	YLR455W	Q06188	304 aa		4.79	□□□□□ -1.64
TRM8	YDL201W	ATG23	Q06671	453 aa		4.79	□□□□□ -1.64
TRM8	YDL201W	MCM21	Q06675	368 aa		4.79	□□□□□ -1.64
TRM8	YDL201W	BUD7	Q08754	746 aa		4.79	□□□□□ -1.64
TRM8	YDL201W	ICL2	Q12031	575 aa		4.79	□□□□□ -1.64
TRM8	YDL201W	LYS2	P07702	1392 aa		4.78	□□□□□ -1.64
TRM8	YDL201W	RSF2	P46974	1380 aa		4.78	□□□□□ -1.64
TRM8	YDL201W	YBR085C-A	O43137	85 aa		4.78	□□□□□ -1.64
TRM8	YDL201W	HIP1	P06775	603 aa		4.78	□□□□□ -1.64
TRM8	YDL201W	SAM35	P14693	329 aa		4.78	□□□□□ -1.64
TRM8	YDL201W	DAP2	P18962	818 aa		4.78	□□□□□ -1.64
TRM8	YDL201W	PET18	P25362	215 aa		4.78	□□□□□ -1.64
TRM8	YDL201W	RPD3	P32561	433 aa		4.78	□□□□□ -1.64
TRM8	YDL201W	MTC7	P32633	139 aa		4.78	□□□□□ -1.64
TRM8	YDL201W	MRE11	P32829	692 aa		4.78	□□□□□ -1.64
TRM8	YDL201W	YME2	P32843	850 aa		4.78	□□□□□ -1.64
TRM8	YDL201W	MRPL4	P36517	319 aa		4.78	□□□□□ -1.64
TRM8	YDL201W	SLM4	P38247	162 aa		4.78	□□□□□ -1.64
TRM8	YDL201W	PEX32	P38292	413 aa		4.78	□□□□□ -1.64
TRM8	YDL201W	PIH1	P38768	344 aa		4.78	□□□□□ -1.64
TRM8	YDL201W	YHR078W	P38799	552 aa		4.78	□□□□□ -1.64
TRM8	YDL201W	YNG2	P38806	282 aa	Known RBP	4.78	□□□□□ -1.64
TRM8	YDL201W	SFB3	P38810	929 aa		4.78	□□□□□ -1.64
TRM8	YDL201W	PET100	P38958	111 aa		4.78	□□□□□ -1.64
TRM8	YDL201W	AFG3	P39925	761 aa		4.78	□□□□□ -1.64
TRM8	YDL201W	SSO2	P39926	295 aa		4.78	□□□□□ -1.64
TRM8	YDL201W	ASG1	P40467	964 aa		4.78	□□□□□ -1.64
TRM8	YDL201W	RPA34	P47006	233 aa	Predicted RBP	4.78	□□□□□ -1.64
TRM8	YDL201W	URB2	P47108	1174 aa		4.78	□□□□□ -1.64
TRM8	YDL201W	TRF5	P48561	642 aa	Known RBP	4.78	□□□□□ -1.64
TRM8	YDL201W	MCM6	P53091	1017 aa	Known RBP	4.78	□□□□□ -1.64
TRM8	YDL201W	STR3	P53101	465 aa	Known RBP	4.78	□□□□□ -1.64
TRM8	YDL201W	RMD9	P53140	646 aa	Known RBP	4.78	□□□□□ -1.64
TRM8	YDL201W	LCL3	P53153	274 aa		4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms