RNA–Protein interactions for RNA: YDL164C

CDC9, Transcript of DNA ligase found in the nucleus and mitochondria, yeastyeast

Gene CDC9, Length 2,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC9YDL164C HOM2P13663 365 aaKnown RBP4.32□□□□□ -1.72
CDC9YDL164C PDA1P16387 420 aaKnown RBP4.32□□□□□ -1.72
CDC9YDL164C PRP2P20095 876 aaPredicted RBP4.32□□□□□ -1.72
CDC9YDL164C FEN2P25621 512 aaKnown RBP4.32□□□□□ -1.72
CDC9YDL164C SSO2P39926 295 aa4.32□□□□□ -1.72
CDC9YDL164C MND2P40577 368 aa4.32□□□□□ -1.72
CDC9YDL164C OYE3P41816 400 aaPredicted RBP4.32□□□□□ -1.72
CDC9YDL164C STB2P46679 850 aa4.32□□□□□ -1.72
CDC9YDL164C NET1P47035 1189 aa4.32□□□□□ -1.72
CDC9YDL164C RPT4P53549 437 aaKnown RBP4.32□□□□□ -1.72
CDC9YDL164C BOP3P53958 396 aa4.32□□□□□ -1.72
CDC9YDL164C EGD1Q02642 157 aaKnown RBP4.32□□□□□ -1.72
CDC9YDL164C RPN9Q04062 393 aaKnown RBP4.32□□□□□ -1.72
CDC9YDL164C URC2Q04411 772 aa4.32□□□□□ -1.72
CDC9YDL164C ARG7Q04728 441 aa4.32□□□□□ -1.72
CDC9YDL164C ADE13Q05911 482 aaKnown RBP4.32□□□□□ -1.72
CDC9YDL164C BOP2Q06150 570 aa4.32□□□□□ -1.72
CDC9YDL164C SIL1Q08199 421 aa4.32□□□□□ -1.72
CDC9YDL164C PKH2Q12236 1081 aaKnown RBP4.32□□□□□ -1.72
CDC9YDL164C RBD2Q12270 262 aa4.32□□□□□ -1.72
CDC9YDL164C NTO1Q12311 748 aa4.32□□□□□ -1.72
CDC9YDL164C PHO11P35842 467 aa4.32□□□□□ -1.72
CDC9YDL164C PHO12P38693 467 aa4.32□□□□□ -1.72
CDC9YDL164C TMN3P40071 706 aa4.32□□□□□ -1.72
CDC9YDL164C RPS7BP48164 190 aaKnown RBP4.32□□□□□ -1.72
CDC9YDL164C BUD9P53226 547 aa4.32□□□□□ -1.72
CDC9YDL164C COX18P53239 316 aa4.32□□□□□ -1.72
CDC9YDL164C SEG1Q04279 960 aa4.32□□□□□ -1.72
CDC9YDL164C VTA1Q06263 330 aa4.32□□□□□ -1.72
CDC9YDL164C HBT1Q07653 1046 aaKnown RBP4.32□□□□□ -1.72
CDC9YDL164C YLL007CQ07799 665 aa4.32□□□□□ -1.72
CDC9YDL164C LYS21Q12122 440 aaKnown RBP4.32□□□□□ -1.72
CDC9YDL164C GIS3Q12418 502 aa4.32□□□□□ -1.72
CDC9YDL164C SEC39Q12745 709 aa4.32□□□□□ -1.72
CDC9YDL164C KRS1P15180 591 aaKnown RBP4.31□□□□□ -1.72
CDC9YDL164C CDC42P19073 191 aa4.31□□□□□ -1.72
CDC9YDL164C GAR1P28007 205 aaKnown RBP4.31□□□□□ -1.72
CDC9YDL164C SSE2P32590 693 aaKnown RBP4.31□□□□□ -1.72
CDC9YDL164C MGM101P32787 269 aaKnown RBP4.31□□□□□ -1.72
CDC9YDL164C BCS1P32839 456 aa4.31□□□□□ -1.72
CDC9YDL164C UGP1P32861 499 aaKnown RBP4.31□□□□□ -1.72
CDC9YDL164C ZTA1P38230 334 aaKnown RBP4.31□□□□□ -1.72
CDC9YDL164C YNG2P38806 282 aaKnown RBP4.31□□□□□ -1.72
CDC9YDL164C YJL206CP39529 758 aa4.31□□□□□ -1.72
CDC9YDL164C YJL070CP40361 888 aa4.31□□□□□ -1.72
CDC9YDL164C YGR149WP48236 432 aa4.31□□□□□ -1.72
CDC9YDL164C IPI3P53877 555 aa4.31□□□□□ -1.72
CDC9YDL164C YNL092WP53934 400 aa4.31□□□□□ -1.72
CDC9YDL164C ERG5P54781 538 aa4.31□□□□□ -1.72
CDC9YDL164C STD1Q02794 444 aa4.31□□□□□ -1.72
CDC9YDL164C VTS1Q08831 523 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72not detected
CDC9YDL164C ERG27Q12452 347 aaKnown RBP4.31□□□□□ -1.72
CDC9YDL164C DFG16Q99234 619 aa4.31□□□□□ -1.72
CDC9YDL164C YBR085C-AO43137 85 aa4.3□□□□□ -1.72
CDC9YDL164C AAC1P04710 309 aa4.3□□□□□ -1.72
CDC9YDL164C RPL6BP05739 176 aaKnown RBP4.3□□□□□ -1.72
CDC9YDL164C CHS2P14180 963 aa4.3□□□□□ -1.72
CDC9YDL164C PEX1P24004 1043 aa4.3□□□□□ -1.72
CDC9YDL164C KIN82P25341 720 aa4.3□□□□□ -1.72
CDC9YDL164C MGR1P25573 417 aa4.3□□□□□ -1.72
CDC9YDL164C YCL068CP25593 260 aa4.3□□□□□ -1.72
CDC9YDL164C CDC20P26309 610 aa4.3□□□□□ -1.72
CDC9YDL164C DSS4P32601 143 aa4.3□□□□□ -1.72
CDC9YDL164C MRPL7P36519 292 aa4.3□□□□□ -1.72
CDC9YDL164C CCL1P37366 393 aa4.3□□□□□ -1.72
CDC9YDL164C PCA1P38360 1216 aa4.3□□□□□ -1.72
CDC9YDL164C WSS1P38838 269 aa4.3□□□□□ -1.72
CDC9YDL164C MNL1P38888 796 aa4.3□□□□□ -1.72
CDC9YDL164C HRB1P38922 454 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
CDC9YDL164C YJL193WP39542 402 aa4.3□□□□□ -1.72
CDC9YDL164C ECM1P39715 212 aa4.3□□□□□ -1.72
CDC9YDL164C YTA12P40341 825 aa4.3□□□□□ -1.72
CDC9YDL164C RIB4P50861 169 aaPredicted RBP4.3□□□□□ -1.72
CDC9YDL164C MCM6P53091 1017 aaKnown RBP4.3□□□□□ -1.72
CDC9YDL164C HOP2P53187 214 aa4.3□□□□□ -1.72
CDC9YDL164C RPS15Q01855 142 aaKnown RBP4.3□□□□□ -1.72
CDC9YDL164C RPL6AQ02326 176 aaKnown RBP4.3□□□□□ -1.72
CDC9YDL164C PLB2Q03674 706 aa4.3□□□□□ -1.72
CDC9YDL164C FRE3Q08905 711 aa4.3□□□□□ -1.72
CDC9YDL164C TGS1Q12052 315 aa4.3□□□□□ -1.72
CDC9YDL164C TAF3Q12297 353 aa4.3□□□□□ -1.72
CDC9YDL164C ZPS1Q12512 249 aa4.3□□□□□ -1.72
CDC9YDL164C YDL007C-AQ2V2Q0 85 aa4.3□□□□□ -1.72
CDC9YDL164C GCD1P09032 578 aaPredicted RBP4.3□□□□□ -1.72
CDC9YDL164C CDC6P09119 513 aa4.3□□□□□ -1.72
CDC9YDL164C AMD2P22580 549 aa4.3□□□□□ -1.72
CDC9YDL164C RDS1P25611 832 aa4.3□□□□□ -1.72
CDC9YDL164C YPT10P38146 199 aa4.3□□□□□ -1.72
CDC9YDL164C YBR259WP38338 688 aa4.3□□□□□ -1.72
CDC9YDL164C BZZ1P38822 633 aa4.3□□□□□ -1.72
CDC9YDL164C GCN20P43535 752 aaKnown RBP4.3□□□□□ -1.72
CDC9YDL164C YFR018CP43599 363 aa4.3□□□□□ -1.72
CDC9YDL164C YGR079WP53249 370 aa4.3□□□□□ -1.72
CDC9YDL164C CLU1Q03690 1277 aaKnown RBP4.3□□□□□ -1.72
CDC9YDL164C YLR297WQ05899 129 aa4.3□□□□□ -1.72
CDC9YDL164C MDM30Q05930 598 aa4.3□□□□□ -1.72
CDC9YDL164C MDM36Q06820 579 aa4.3□□□□□ -1.72
CDC9YDL164C TRM2P33753 639 aa4.29□□□□□ -1.72
CDC9YDL164C MRPL37P36532 105 aa4.29□□□□□ -1.72
CDC9YDL164C ATP3P38077 311 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 29.1 ms