RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	HOS2	P53096	452 aa	Predicted RBP	5.59	□□□□□ -1.51
RPN5	YDL147W	VPS9	P54787	451 aa		5.59	□□□□□ -1.51
RPN5	YDL147W	YOL159C	Q08300	171 aa		5.59	□□□□□ -1.51
RPN5	YDL147W	YRF1-4	O13559	1382 aa		5.59	□□□□□ -1.52
RPN5	YDL147W	PRD1	P25375	712 aa		5.58	□□□□□ -1.52
RPN5	YDL147W	YCR051W	P25631	222 aa		5.58	□□□□□ -1.52
RPN5	YDL147W	GCS1	P35197	352 aa		5.58	□□□□□ -1.52
RPN5	YDL147W	STB6	P36085	766 aa		5.58	□□□□□ -1.52
RPN5	YDL147W	APE3	P37302	537 aa	Known RBP	5.58	□□□□□ -1.52
RPN5	YDL147W	RPL32	P38061	130 aa	Known RBP	5.58	□□□□□ -1.52
RPN5	YDL147W	MSR1	P38714	643 aa		5.58	□□□□□ -1.52
RPN5	YDL147W	LRP1	P38801	184 aa	Known RBP	5.58	□□□□□ -1.52
RPN5	YDL147W	IRC7	P43623	340 aa		5.58	□□□□□ -1.52
RPN5	YDL147W	APT1	P49435	187 aa	Known RBP	5.58	□□□□□ -1.52
RPN5	YDL147W	ART5	P53244	586 aa	Known RBP	5.58	□□□□□ -1.52
RPN5	YDL147W	CIK1	Q01649	594 aa		5.58	□□□□□ -1.52
RPN5	YDL147W	ORM2	Q06144	216 aa		5.58	□□□□□ -1.52
RPN5	YDL147W	VTA1	Q06263	330 aa		5.58	□□□□□ -1.52
RPN5	YDL147W	IRC3	Q06683	689 aa		5.58	□□□□□ -1.52
RPN5	YDL147W	YER145C-A	A0A023PYF4	145 aa		5.57	□□□□□ -1.52
RPN5	YDL147W	HSP82	P02829	709 aa	Known RBP	5.57	□□□□□ -1.52
RPN5	YDL147W	STE50	P25344	346 aa		5.57	□□□□□ -1.52
RPN5	YDL147W	HOT13	P36078	116 aa		5.57	□□□□□ -1.52
RPN5	YDL147W	NUP133	P36161	1157 aa		5.57	□□□□□ -1.52
RPN5	YDL147W	ANS1	P38832	159 aa		5.57	□□□□□ -1.52
RPN5	YDL147W	MNP1	P53163	194 aa	Predicted RBP	5.57	□□□□□ -1.52
RPN5	YDL147W	ATP23	P53722	227 aa		5.57	□□□□□ -1.52
RPN5	YDL147W	GPA1	P08539	472 aa		5.56	□□□□□ -1.52
RPN5	YDL147W	PMS1	P14242	873 aa		5.56	□□□□□ -1.52
RPN5	YDL147W	URE2	P23202	354 aa	Known RBP	5.56	□□□□□ -1.52
RPN5	YDL147W	SEC66	P33754	206 aa		5.56	□□□□□ -1.52
RPN5	YDL147W	YKL100C	P34248	587 aa		5.56	□□□□□ -1.52
RPN5	YDL147W	PXL1	P36166	706 aa		5.56	□□□□□ -1.52
RPN5	YDL147W	CIN4	P39110	191 aa		5.56	□□□□□ -1.52
RPN5	YDL147W	YJL107C	P42947	387 aa		5.56	□□□□□ -1.52
RPN5	YDL147W	STB2	P46679	850 aa		5.56	□□□□□ -1.52
RPN5	YDL147W	BPL1	P48445	690 aa	Predicted RBP	5.56	□□□□□ -1.52
RPN5	YDL147W	SGF73	P53165	657 aa		5.56	□□□□□ -1.52
RPN5	YDL147W	RPC11	Q04307	110 aa	Predicted RBP	5.56	□□□□□ -1.52
RPN5	YDL147W	SWF1	Q04629	336 aa		5.56	□□□□□ -1.52
RPN5	YDL147W	ERB1	Q04660	807 aa	Known RBP	5.56	□□□□□ -1.52
RPN5	YDL147W	SUI2	P20459	304 aa	Known RBP	5.55	□□□□□ -1.52
RPN5	YDL147W	OPI1	P21957	404 aa		5.55	□□□□□ -1.52
RPN5	YDL147W	BUD5	P25300	642 aa	Predicted RBP	5.55	□□□□□ -1.52
RPN5	YDL147W	HCS1	P34243	683 aa		5.55	□□□□□ -1.52
RPN5	YDL147W	MIA40	P36046	403 aa		5.55	□□□□□ -1.52
RPN5	YDL147W	JEM1	P40358	645 aa		5.55	□□□□□ -1.52
RPN5	YDL147W	DLD2	P46681	530 aa	Known RBP	5.55	□□□□□ -1.52
RPN5	YDL147W	YTP1	P53584	459 aa		5.55	□□□□□ -1.52
RPN5	YDL147W	RSM23	Q01163	450 aa		5.55	□□□□□ -1.52
RPN5	YDL147W	PDS5	Q04264	1277 aa		5.55	□□□□□ -1.52
RPN5	YDL147W	PIG1	Q06216	648 aa		5.55	□□□□□ -1.52
RPN5	YDL147W	TUB1	P09733	447 aa	Known RBP	5.54	□□□□□ -1.52
RPN5	YDL147W	RPL3	P14126	387 aa	Known RBP	5.54	□□□□□ -1.52
RPN5	YDL147W	CLB2	P24869	491 aa		5.54	□□□□□ -1.52
RPN5	YDL147W	LTP1	P40347	161 aa		5.54	□□□□□ -1.52
RPN5	YDL147W	ZIM17	P42844	174 aa		5.54	□□□□□ -1.52
RPN5	YDL147W	TOF2	Q02208	771 aa		5.54	□□□□□ -1.52
RPN5	YDL147W	AIM32	Q04689	311 aa		5.54	□□□□□ -1.52
RPN5	YDL147W	RTT109	Q07794	436 aa		5.54	□□□□□ -1.52
RPN5	YDL147W	YLR111W	Q12528	110 aa		5.54	□□□□□ -1.52
RPN5	YDL147W	AFI1	Q99222	893 aa		5.54	□□□□□ -1.52
RPN5	YDL147W	RPB8	P20436	146 aa		5.53	□□□□□ -1.52
RPN5	YDL147W	CLB1	P24868	471 aa		5.53	□□□□□ -1.52
RPN5	YDL147W	TFB1	P32776	642 aa		5.53	□□□□□ -1.52
RPN5	YDL147W	CAF130	P53280	1122 aa	Predicted RBP	5.53	□□□□□ -1.52
RPN5	YDL147W	BNI5	P53890	448 aa	Known RBP	5.53	□□□□□ -1.52
RPN5	YDL147W	ROY1	Q04847	553 aa		5.53	□□□□□ -1.52
RPN5	YDL147W	YLR345W	Q06137	509 aa		5.53	□□□□□ -1.52
RPN5	YDL147W	ATG26	Q06321	1198 aa		5.53	□□□□□ -1.52
RPN5	YDL147W	FRE3	Q08905	711 aa		5.53	□□□□□ -1.52
RPN5	YDL147W	YDL007C-A	Q2V2Q0	85 aa		5.53	□□□□□ -1.52
RPN5	YDL147W	GAC1	P28006	793 aa		5.52	□□□□□ -1.53
RPN5	YDL147W	STV1	P37296	890 aa		5.52	□□□□□ -1.53
RPN5	YDL147W	RIX1	P38883	763 aa	Predicted RBP	5.52	□□□□□ -1.53
RPN5	YDL147W	YGR126W	P53274	230 aa		5.52	□□□□□ -1.53
RPN5	YDL147W	ASI1	P54074	624 aa		5.52	□□□□□ -1.53
RPN5	YDL147W	RPA49	Q01080	415 aa	Predicted RBP	5.52	□□□□□ -1.53
RPN5	YDL147W	PUT2	P07275	575 aa		5.51	□□□□□ -1.53
RPN5	YDL147W	NUP1	P20676	1076 aa		5.51	□□□□□ -1.53
RPN5	YDL147W	MNE1	P24720	663 aa		5.51	□□□□□ -1.53
RPN5	YDL147W	ROT2	P38138	954 aa		5.51	□□□□□ -1.53
RPN5	YDL147W	LYS20	P48570	428 aa	Known RBP	5.51	□□□□□ -1.53
RPN5	YDL147W	KAP120	Q02932	1032 aa		5.51	□□□□□ -1.53
RPN5	YDL147W	YDL057W	Q07379	328 aa		5.51	□□□□□ -1.53
RPN5	YDL147W	RPS10A	Q08745	105 aa	Predicted RBP	5.51	□□□□□ -1.53
RPN5	YDL147W	ERG11	P10614	530 aa		5.5	□□□□□ -1.53
RPN5	YDL147W	SNF3	P10870	884 aa		5.5	□□□□□ -1.53
RPN5	YDL147W	HOM2	P13663	365 aa	Known RBP	5.5	□□□□□ -1.53
RPN5	YDL147W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	5.5	□□□□□ -1.53	not detected
RPN5	YDL147W	COQ3	P27680	312 aa		5.5	□□□□□ -1.53
RPN5	YDL147W	URA7	P28274	579 aa	Known RBP	5.5	□□□□□ -1.53
RPN5	YDL147W	MTR2	P34232	184 aa	Known RBP	5.5	□□□□□ -1.53
RPN5	YDL147W	GDI1	P39958	451 aa	Known RBP	5.5	□□□□□ -1.53
RPN5	YDL147W	VRG4	P40107	337 aa		5.5	□□□□□ -1.53
RPN5	YDL147W	SNO3	P43544	222 aa		5.5	□□□□□ -1.53
RPN5	YDL147W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	5.5	□□□□□ -1.53	not detected
RPN5	YDL147W	ALK1	P43633	760 aa	Known RBP	5.5	□□□□□ -1.53
RPN5	YDL147W	RPS10B	P46784	105 aa	Known RBP	5.5	□□□□□ -1.53
RPN5	YDL147W	DUG3	P53871	357 aa		5.5	□□□□□ -1.53

Retrieved 100 of 5,963 RNA–protein pairs in 34.3 ms