RNA–Protein interactions for RNA: YBR223C

TDP1, Transcript of Tyrosyl-DNA phosphodiesterase I, yeastyeast

Gene TDP1, Length 1,635 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDP1YBR223C YOL159CQ08300 171 aa6.82□□□□□ -1.32
TDP1YBR223C HRK1Q08732 759 aaKnown RBP6.82□□□□□ -1.32
TDP1YBR223C LPX1Q12405 387 aaKnown RBP6.82□□□□□ -1.32
TDP1YBR223C CBP2P03874 630 aaPredicted RBP6.81□□□□□ -1.32
TDP1YBR223C HEM1P09950 548 aaPredicted RBP6.81□□□□□ -1.32
TDP1YBR223C MAS1P10507 462 aa6.81□□□□□ -1.32
TDP1YBR223C TOP3P13099 656 aa6.81□□□□□ -1.32
TDP1YBR223C KSS1P14681 368 aa6.81□□□□□ -1.32
TDP1YBR223C GUK1P15454 187 aaKnown RBP6.81□□□□□ -1.32
TDP1YBR223C FAR1P21268 830 aa6.81□□□□□ -1.32
TDP1YBR223C CLB2P24869 491 aa6.81□□□□□ -1.32
TDP1YBR223C SGF29P25554 259 aa6.81□□□□□ -1.32
TDP1YBR223C POL4P25615 582 aa6.81□□□□□ -1.32
TDP1YBR223C FUN30P31380 1131 aa6.81□□□□□ -1.32
TDP1YBR223C TFB1P32776 642 aa6.81□□□□□ -1.32
TDP1YBR223C SEC66P33754 206 aa6.81□□□□□ -1.32
TDP1YBR223C CAF4P36130 643 aa6.81□□□□□ -1.32
TDP1YBR223C YKR051WP36142 418 aa6.81□□□□□ -1.32
TDP1YBR223C MRPL17P36528 281 aa6.81□□□□□ -1.32
TDP1YBR223C POL12P38121 705 aaPredicted RBP6.81□□□□□ -1.32
TDP1YBR223C ETP1P38748 585 aaKnown RBP6.81□□□□□ -1.32
TDP1YBR223C THO1P40040 218 aaKnown RBP6.81□□□□□ -1.32
TDP1YBR223C RIC1P40395 1056 aa6.81□□□□□ -1.32
TDP1YBR223C FKH2P41813 862 aa6.81□□□□□ -1.32
TDP1YBR223C TES1P41903 349 aaKnown RBP6.81□□□□□ -1.32
TDP1YBR223C PET130P47065 347 aa6.81□□□□□ -1.32
TDP1YBR223C YGR035CP53222 116 aa6.81□□□□□ -1.32
TDP1YBR223C ARP4P80428 489 aa6.81□□□□□ -1.32
TDP1YBR223C UGO1Q03327 502 aa6.81□□□□□ -1.32
TDP1YBR223C RPN4Q03465 531 aa6.81□□□□□ -1.32
TDP1YBR223C SMP3Q04174 516 aa6.81□□□□□ -1.32
TDP1YBR223C RAD33Q04231 177 aa6.81□□□□□ -1.32
TDP1YBR223C NDL1Q06568 189 aa6.81□□□□□ -1.32
TDP1YBR223C RSB1Q08417 382 aa6.81□□□□□ -1.32
TDP1YBR223C GPB1Q08886 897 aa6.81□□□□□ -1.32
TDP1YBR223C YLR149CQ99296 730 aa6.81□□□□□ -1.32
TDP1YBR223C VCX1Q99385 411 aa6.81□□□□□ -1.32
TDP1YBR223C RHO1P06780 209 aaKnown RBP6.8□□□□□ -1.32
TDP1YBR223C SPS1P08458 490 aa6.8□□□□□ -1.32
TDP1YBR223C SCH9P11792 824 aaKnown RBP6.8□□□□□ -1.32
TDP1YBR223C MIH1P23748 554 aa6.8□□□□□ -1.32
TDP1YBR223C TYE7P33122 291 aaPredicted RBP6.8□□□□□ -1.32
TDP1YBR223C RPT5P33297 434 aaKnown RBP6.8□□□□□ -1.32
TDP1YBR223C SPC34P36131 295 aa6.8□□□□□ -1.32
TDP1YBR223C UIP5P36137 443 aa6.8□□□□□ -1.32
TDP1YBR223C MRPL40P36534 297 aa6.8□□□□□ -1.32
TDP1YBR223C LDB7P38210 180 aa6.8□□□□□ -1.32
TDP1YBR223C AMN1P38285 549 aaPredicted RBP6.8□□□□□ -1.32
TDP1YBR223C YBR285WP38354 144 aa6.8□□□□□ -1.32
TDP1YBR223C YHR045WP38775 560 aa6.8□□□□□ -1.32
TDP1YBR223C YHR218WP38899 603 aa6.8□□□□□ -1.32
TDP1YBR223C AIM20P40451 204 aa6.8□□□□□ -1.32
TDP1YBR223C YRB2P40517 327 aa6.8□□□□□ -1.32
TDP1YBR223C MSS2P40990 351 aa6.8□□□□□ -1.32
TDP1YBR223C SHY1P53266 389 aa6.8□□□□□ -1.32
TDP1YBR223C COQ6P53318 479 aa6.8□□□□□ -1.32
TDP1YBR223C YNL018CP53976 612 aa6.8□□□□□ -1.32
TDP1YBR223C YDR239CQ03780 787 aa6.8□□□□□ -1.32
TDP1YBR223C TRM12Q04235 462 aa6.8□□□□□ -1.32
TDP1YBR223C NUT2Q06213 157 aa6.8□□□□□ -1.32
TDP1YBR223C MCP2Q06567 569 aa6.8□□□□□ -1.32
TDP1YBR223C VAM6Q07468 1049 aa6.8□□□□□ -1.32
TDP1YBR223C UPC2Q12151 913 aa6.8□□□□□ -1.32
TDP1YBR223C PUP3P25451 205 aaKnown RBP6.79□□□□□ -1.32
TDP1YBR223C DMC1P25453 334 aa6.79□□□□□ -1.32
TDP1YBR223C EMC1P25574 760 aa6.79□□□□□ -1.32
TDP1YBR223C PEX3P28795 441 aa6.79□□□□□ -1.32
TDP1YBR223C SAC1P32368 623 aaKnown RBP6.79□□□□□ -1.32
TDP1YBR223C STE14P32584 239 aa6.79□□□□□ -1.32
TDP1YBR223C RPS1AP33442 255 aaKnown RBP6.79□□□□□ -1.32
TDP1YBR223C GCS1P35197 352 aa6.79□□□□□ -1.32
TDP1YBR223C FES1P38260 290 aa6.79□□□□□ -1.32
TDP1YBR223C RMD8P43620 662 aa6.79□□□□□ -1.32
TDP1YBR223C CSN12P47130 423 aa6.79□□□□□ -1.32
TDP1YBR223C GTO1P48239 356 aa6.79□□□□□ -1.32
TDP1YBR223C YDR132CQ03900 495 aa6.79□□□□□ -1.32
TDP1YBR223C DTD1Q07648 150 aaKnown RBP6.79□□□□□ -1.32
TDP1YBR223C RSA1Q08932 381 aa6.79□□□□□ -1.32
TDP1YBR223C NDJ1Q12366 352 aa6.79□□□□□ -1.32
TDP1YBR223C RPS9AO13516 197 aaKnown RBP6.79□□□□□ -1.32
TDP1YBR223C ARG81P05085 880 aa6.79□□□□□ -1.32
TDP1YBR223C SST2P11972 698 aaKnown RBP6.79□□□□□ -1.32
TDP1YBR223C MRPL8P22353 238 aa6.79□□□□□ -1.32
TDP1YBR223C CMK2P22517 447 aa6.79□□□□□ -1.32
TDP1YBR223C PGS1P25578 521 aa6.79□□□□□ -1.32
TDP1YBR223C UBC8P28263 218 aa6.79□□□□□ -1.32
TDP1YBR223C SYN8P31377 255 aa6.79□□□□□ -1.32
TDP1YBR223C CYS4P32582 507 aaKnown RBP6.79□□□□□ -1.32
TDP1YBR223C STB6P36085 766 aa6.79□□□□□ -1.32
TDP1YBR223C APM3P38153 483 aa6.79□□□□□ -1.32
TDP1YBR223C RFS1P38234 210 aaKnown RBP6.79□□□□□ -1.32
TDP1YBR223C GND1P38720 489 aaKnown RBP6.79□□□□□ -1.32
TDP1YBR223C SSZ1P38788 538 aaKnown RBP6.79□□□□□ -1.32
TDP1YBR223C RBG1P39729 369 aa6.79□□□□□ -1.32
TDP1YBR223C BTT1P40314 149 aaPredicted RBP6.79□□□□□ -1.32
TDP1YBR223C GCD10P41814 478 aa6.79□□□□□ -1.32
TDP1YBR223C SIP4P46954 829 aa6.79□□□□□ -1.32
TDP1YBR223C NAS6P50086 228 aa6.79□□□□□ -1.32
TDP1YBR223C VPS62P53285 467 aa6.79□□□□□ -1.32
TDP1YBR223C TOF2Q02208 771 aa6.79□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms