RNA–Protein interactions for RNA: YBR055C

PRP6, Transcript of Splicing factor, yeastyeast

Gene PRP6, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP6YBR055C GLG1P36143 616 aa2.42□□□□□ -2.02
PRP6YBR055C ICS2P38284 255 aa2.42□□□□□ -2.02
PRP6YBR055C MUP3P38734 546 aa2.42□□□□□ -2.02
PRP6YBR055C UIP3P39547 235 aa2.42□□□□□ -2.02
PRP6YBR055C YGR111WP53265 400 aa2.42□□□□□ -2.02
PRP6YBR055C YGR127WP53275 312 aa2.42□□□□□ -2.02
PRP6YBR055C FIN1Q03898 291 aa2.42□□□□□ -2.02
PRP6YBR055C SOV1Q04748 898 aa2.42□□□□□ -2.02
PRP6YBR055C YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
PRP6YBR055C TEN1Q07921 160 aa2.42□□□□□ -2.02
PRP6YBR055C SIL1Q08199 421 aa2.42□□□□□ -2.02
PRP6YBR055C LEU9Q12166 604 aaKnown RBP2.42□□□□□ -2.02
PRP6YBR055C TAF3Q12297 353 aa2.42□□□□□ -2.02
PRP6YBR055C RTC1Q08281 1341 aa2.42□□□□□ -2.02
PRP6YBR055C GLK1P17709 500 aaKnown RBP2.42□□□□□ -2.02
PRP6YBR055C ART10P18634 518 aaKnown RBP2.42□□□□□ -2.02
PRP6YBR055C SPE2P21182 396 aa2.42□□□□□ -2.02
PRP6YBR055C PUP3P25451 205 aaKnown RBP2.42□□□□□ -2.02
PRP6YBR055C POT1P27796 417 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
PRP6YBR055C YME2P32843 850 aa2.42□□□□□ -2.02
PRP6YBR055C SEC66P33754 206 aa2.42□□□□□ -2.02
PRP6YBR055C SWH1P35845 1188 aa2.42□□□□□ -2.02
PRP6YBR055C SNU114P36048 1008 aaKnown RBP2.42□□□□□ -2.02
PRP6YBR055C TUL1P36096 758 aa2.42□□□□□ -2.02
PRP6YBR055C HEL1P36113 551 aa2.42□□□□□ -2.02
PRP6YBR055C ELO1P39540 310 aa2.42□□□□□ -2.02
PRP6YBR055C MIT1P40002 666 aa2.42□□□□□ -2.02
PRP6YBR055C VMA13P41807 478 aaKnown RBP2.42□□□□□ -2.02
PRP6YBR055C YFL015CP43578 164 aa2.42□□□□□ -2.02
PRP6YBR055C STB2P46679 850 aa2.42□□□□□ -2.02
PRP6YBR055C CTF4Q01454 927 aa2.42□□□□□ -2.02
PRP6YBR055C HRD3Q05787 833 aa2.42□□□□□ -2.02
PRP6YBR055C ARO10Q06408 635 aa2.42□□□□□ -2.02
PRP6YBR055C DCI1Q08558 271 aa2.42□□□□□ -2.02
PRP6YBR055C VPS54Q12071 889 aa2.42□□□□□ -2.02
PRP6YBR055C SEC3P33332 1336 aaKnown RBP2.42□□□□□ -2.02
PRP6YBR055C ECM5Q03214 1411 aa2.42□□□□□ -2.02
PRP6YBR055C SRV2P17555 526 aaKnown RBP2.41□□□□□ -2.02
PRP6YBR055C CLC1P17891 233 aa2.41□□□□□ -2.02
PRP6YBR055C RML2P32611 393 aa2.41□□□□□ -2.02
PRP6YBR055C SLM4P38247 162 aa2.41□□□□□ -2.02
PRP6YBR055C PHM8P40025 321 aa2.41□□□□□ -2.02
PRP6YBR055C ATF1P40353 525 aa2.41□□□□□ -2.02
PRP6YBR055C VTI1Q04338 217 aa2.41□□□□□ -2.02
PRP6YBR055C DON1Q05610 365 aa2.41□□□□□ -2.02
PRP6YBR055C FRE3Q08905 711 aa2.41□□□□□ -2.02
PRP6YBR055C LEA1Q08963 238 aaPredicted RBP2.41□□□□□ -2.02
PRP6YBR055C REX3Q12090 404 aa2.41□□□□□ -2.02
PRP6YBR055C YDL007C-AQ2V2Q0 85 aa2.41□□□□□ -2.02
PRP6YBR055C YML002WP0CF17 737 aa2.41□□□□□ -2.02
PRP6YBR055C RNQ1P25367 405 aa2.41□□□□□ -2.02
PRP6YBR055C PTC6P25646 442 aa2.41□□□□□ -2.02
PRP6YBR055C YBL055CP34220 418 aaPredicted RBP2.41□□□□□ -2.02
PRP6YBR055C DEF1P35732 738 aaKnown RBP2.41□□□□□ -2.02
PRP6YBR055C YMC2P38087 329 aa2.41□□□□□ -2.02
PRP6YBR055C MSR1P38714 643 aa2.41□□□□□ -2.02
PRP6YBR055C YHL017WP38745 532 aa2.41□□□□□ -2.02
PRP6YBR055C BDH2P39713 417 aa2.41□□□□□ -2.02
PRP6YBR055C STU2P46675 888 aa2.41□□□□□ -2.02
PRP6YBR055C FYV8P46949 817 aaKnown RBP2.41□□□□□ -2.02
PRP6YBR055C APT1P49435 187 aaKnown RBP2.41□□□□□ -2.02
PRP6YBR055C CPR8P53728 308 aa2.41□□□□□ -2.02
PRP6YBR055C TOF1P53840 1238 aa2.41□□□□□ -2.02
PRP6YBR055C PFA5Q03289 374 aa2.41□□□□□ -2.02
PRP6YBR055C YOR389WQ08912 624 aa2.41□□□□□ -2.02
PRP6YBR055C HSP42Q12329 375 aa2.41□□□□□ -2.02
PRP6YBR055C YCF1P39109 1515 aaKnown RBP2.41□□□□□ -2.02
PRP6YBR055C HIP1P06775 603 aa2.4□□□□□ -2.02
PRP6YBR055C BOS1P25385 244 aa2.4□□□□□ -2.02
PRP6YBR055C CTS1P29029 562 aa2.4□□□□□ -2.02
PRP6YBR055C LTV1P34078 463 aa2.4□□□□□ -2.02
PRP6YBR055C SIF2P38262 535 aa2.4□□□□□ -2.02
PRP6YBR055C GND1P38720 489 aaKnown RBP2.4□□□□□ -2.02
PRP6YBR055C TIF4631P39935 952 aaKnown RBP2.4□□□□□ -2.02
PRP6YBR055C CCT7P42943 550 aaKnown RBP2.4□□□□□ -2.02
PRP6YBR055C NET1P47035 1189 aa2.4□□□□□ -2.02
PRP6YBR055C YGL138CP53122 345 aa2.4□□□□□ -2.02
PRP6YBR055C YNL144CP53907 740 aa2.4□□□□□ -2.02
PRP6YBR055C NCS2P53923 493 aaPredicted RBP2.4□□□□□ -2.02
PRP6YBR055C ADA2Q02336 434 aa2.4□□□□□ -2.02
PRP6YBR055C MUK1Q02866 612 aa2.4□□□□□ -2.02
PRP6YBR055C HOT1Q03213 719 aa2.4□□□□□ -2.02
PRP6YBR055C COQ9Q05779 260 aa2.4□□□□□ -2.02
PRP6YBR055C RTT109Q07794 436 aa2.4□□□□□ -2.02
PRP6YBR055C APL4Q12028 832 aa2.4□□□□□ -2.02
PRP6YBR055C SKS1Q12505 502 aa2.4□□□□□ -2.02
PRP6YBR055C LPD1P09624 499 aaKnown RBP2.4□□□□□ -2.03
PRP6YBR055C RPL1AP0CX43 217 aaKnown RBP2.4□□□□□ -2.03
PRP6YBR055C RPL1BP0CX44 217 aaKnown RBP2.4□□□□□ -2.03
PRP6YBR055C THI80P35202 319 aa2.4□□□□□ -2.03
PRP6YBR055C NUP133P36161 1157 aa2.4□□□□□ -2.03
PRP6YBR055C RPL32P38061 130 aaKnown RBP2.4□□□□□ -2.03
PRP6YBR055C NTC20P38302 140 aaPredicted RBP2.4□□□□□ -2.03
PRP6YBR055C ASN1P49089 572 aaKnown RBP2.4□□□□□ -2.03
PRP6YBR055C YGL117WP53133 265 aa2.4□□□□□ -2.03
PRP6YBR055C PRP3Q03338 469 aaPredicted RBP2.4□□□□□ -2.03
PRP6YBR055C EMI2Q04409 500 aaKnown RBP2.4□□□□□ -2.03
PRP6YBR055C RRP45Q05636 305 aaKnown RBP2.4□□□□□ -2.03
PRP6YBR055C ECM30Q06673 1274 aa2.4□□□□□ -2.03
PRP6YBR055C CYK3Q07533 885 aa2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 40.7 ms