RNA–Protein interactions for RNA: YAL002W

VPS8, Transcript of Membrane-binding component of the CORVET complex, yeastyeast

Gene VPS8, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS8YAL002W ALG5P40350 334 aa2.09□□□□□ -2.07
VPS8YAL002W URM1P40554 99 aaPredicted RBP2.09□□□□□ -2.07
VPS8YAL002W FET5P43561 622 aa2.09□□□□□ -2.07
VPS8YAL002W AGX1P43567 385 aa2.09□□□□□ -2.07
VPS8YAL002W AAD10P47182 288 aa2.09□□□□□ -2.07
VPS8YAL002W VPS4P52917 437 aa2.09□□□□□ -2.07
VPS8YAL002W BUD17P53727 317 aa2.09□□□□□ -2.07
VPS8YAL002W DAK1P54838 584 aaKnown RBP2.09□□□□□ -2.07
VPS8YAL002W RIX7Q07844 837 aaKnown RBP2.09□□□□□ -2.07
VPS8YAL002W BUD7Q08754 746 aa2.09□□□□□ -2.07
VPS8YAL002W VPS54Q12071 889 aa2.09□□□□□ -2.07
VPS8YAL002W HER1Q12276 1246 aa2.09□□□□□ -2.07
VPS8YAL002W GPR1Q12361 961 aa2.09□□□□□ -2.07
VPS8YAL002W LAM4P38800 1345 aa2.09□□□□□ -2.07
VPS8YAL002W FBP1P09201 348 aa2.09□□□□□ -2.07
VPS8YAL002W YML002WP0CF17 737 aa2.09□□□□□ -2.07
VPS8YAL002W YCR051WP25631 222 aa2.09□□□□□ -2.07
VPS8YAL002W URK1P27515 501 aa2.09□□□□□ -2.07
VPS8YAL002W NTG1P31378 399 aa2.09□□□□□ -2.07
VPS8YAL002W SOF1P33750 489 aaKnown RBP2.09□□□□□ -2.07
VPS8YAL002W PPS1P38148 807 aa2.09□□□□□ -2.07
VPS8YAL002W GDT1P38301 280 aaPredicted RBP2.09□□□□□ -2.07
VPS8YAL002W PIH1P38768 344 aa2.09□□□□□ -2.07
VPS8YAL002W MPT5P39016 859 aaKnown RBP RIP-Chip data2.09□□□□□ -2.07not detected
VPS8YAL002W RGI2P40188 164 aa2.09□□□□□ -2.07
VPS8YAL002W GID8P40208 455 aa2.09□□□□□ -2.07
VPS8YAL002W VMA13P41807 478 aaKnown RBP2.09□□□□□ -2.07
VPS8YAL002W RPN11P43588 306 aaKnown RBP2.09□□□□□ -2.07
VPS8YAL002W TCB2P48231 1178 aa2.09□□□□□ -2.07
VPS8YAL002W KEL2P50090 882 aa2.09□□□□□ -2.07
VPS8YAL002W VTC3Q02725 835 aa2.09□□□□□ -2.07
VPS8YAL002W EFR3Q03653 782 aaKnown RBP2.09□□□□□ -2.07
VPS8YAL002W LUC7Q07508 261 aaPredicted RBP2.09□□□□□ -2.07
VPS8YAL002W BMS1Q08965 1183 aaKnown RBP2.09□□□□□ -2.07
VPS8YAL002W TGS1Q12052 315 aa2.09□□□□□ -2.07
VPS8YAL002W MDY2Q12285 212 aa2.09□□□□□ -2.07
VPS8YAL002W TRM13Q12383 476 aa2.09□□□□□ -2.07
VPS8YAL002W SEC39Q12745 709 aa2.09□□□□□ -2.07
VPS8YAL002W DFR1P07807 211 aaKnown RBP RIP-Chip data2.09□□□□□ -2.08not detected
VPS8YAL002W MRPL25P23369 157 aa2.09□□□□□ -2.08
VPS8YAL002W VPS17P32913 551 aa2.09□□□□□ -2.08
VPS8YAL002W OTU2P38747 307 aaKnown RBP2.09□□□□□ -2.08
VPS8YAL002W YDR089WP38966 869 aa2.09□□□□□ -2.08
VPS8YAL002W SAP1P39955 897 aaKnown RBP2.09□□□□□ -2.08
VPS8YAL002W MRX1P40050 688 aa2.09□□□□□ -2.08
VPS8YAL002W YJL043WP47053 257 aa2.09□□□□□ -2.08
VPS8YAL002W YDL183CP48569 320 aa2.09□□□□□ -2.08
VPS8YAL002W CUL3P53202 744 aa2.09□□□□□ -2.08
VPS8YAL002W COG2P53271 262 aa2.09□□□□□ -2.08
VPS8YAL002W PDR16P53860 351 aaKnown RBP2.09□□□□□ -2.08
VPS8YAL002W ARO10Q06408 635 aa2.09□□□□□ -2.08
VPS8YAL002W VAM6Q07468 1049 aa2.09□□□□□ -2.08
VPS8YAL002W AHA1Q12449 350 aaKnown RBP2.09□□□□□ -2.08
VPS8YAL002W ISN1Q99312 450 aa2.09□□□□□ -2.08
VPS8YAL002W YIL177CP40434 1758 aa2.09□□□□□ -2.08
VPS8YAL002W YJL225CP40889 1758 aa2.09□□□□□ -2.08
VPS8YAL002W SEC3P33332 1336 aaKnown RBP2.08□□□□□ -2.08
VPS8YAL002W HXK2P04807 486 aaKnown RBP2.08□□□□□ -2.08
VPS8YAL002W HOM2P13663 365 aaKnown RBP2.08□□□□□ -2.08
VPS8YAL002W PHO84P25297 587 aaKnown RBP2.08□□□□□ -2.08
VPS8YAL002W LTV1P34078 463 aa2.08□□□□□ -2.08
VPS8YAL002W CTM1P38818 585 aa2.08□□□□□ -2.08
VPS8YAL002W YEL057CP39983 233 aa2.08□□□□□ -2.08
VPS8YAL002W OSW5P40219 148 aa2.08□□□□□ -2.08
VPS8YAL002W PFA5Q03289 374 aa2.08□□□□□ -2.08
VPS8YAL002W UFO1Q04511 668 aa2.08□□□□□ -2.08
VPS8YAL002W DON1Q05610 365 aa2.08□□□□□ -2.08
VPS8YAL002W ATG38Q05789 226 aaKnown RBP2.08□□□□□ -2.08
VPS8YAL002W FMP45Q07651 309 aa2.08□□□□□ -2.08
VPS8YAL002W SIL1Q08199 421 aa2.08□□□□□ -2.08
VPS8YAL002W CTF3Q12748 733 aa2.08□□□□□ -2.08
VPS8YAL002W ALG7P07286 448 aa2.08□□□□□ -2.08
VPS8YAL002W CLC1P17891 233 aa2.08□□□□□ -2.08
VPS8YAL002W SRB2P34162 210 aa2.08□□□□□ -2.08
VPS8YAL002W MRPL40P36534 297 aa2.08□□□□□ -2.08
VPS8YAL002W ADH5P38113 351 aaKnown RBP2.08□□□□□ -2.08
VPS8YAL002W UBP13P38187 747 aa2.08□□□□□ -2.08
VPS8YAL002W VID24P38263 362 aa2.08□□□□□ -2.08
VPS8YAL002W TIF5P38431 405 aaKnown RBP2.08□□□□□ -2.08
VPS8YAL002W LRO1P40345 661 aa2.08□□□□□ -2.08
VPS8YAL002W YJL163CP46996 555 aa2.08□□□□□ -2.08
VPS8YAL002W LYS4P49367 693 aaPredicted RBP2.08□□□□□ -2.08
VPS8YAL002W YGR066CP53242 292 aa2.08□□□□□ -2.08
VPS8YAL002W TOF2Q02208 771 aa2.08□□□□□ -2.08
VPS8YAL002W VPS38Q05919 439 aa2.08□□□□□ -2.08
VPS8YAL002W MMR1Q06324 491 aa2.08□□□□□ -2.08
VPS8YAL002W ARV1Q06541 321 aa2.08□□□□□ -2.08
VPS8YAL002W NOP6Q07623 225 aaKnown RBP2.08□□□□□ -2.08
VPS8YAL002W AIM6Q07716 390 aa2.08□□□□□ -2.08
VPS8YAL002W MLH3Q12083 715 aa2.08□□□□□ -2.08
VPS8YAL002W RKI1Q12189 258 aa2.08□□□□□ -2.08
VPS8YAL002W RPN5Q12250 445 aaKnown RBP2.08□□□□□ -2.08
VPS8YAL002W GPM3Q12326 303 aa2.08□□□□□ -2.08
VPS8YAL002W YJR112W-AQ3E743 109 aa2.08□□□□□ -2.08
VPS8YAL002W CET1O13297 549 aaPredicted RBP2.08□□□□□ -2.08
VPS8YAL002W ERV1P27882 189 aa2.08□□□□□ -2.08
VPS8YAL002W ARC19P33204 171 aaKnown RBP2.08□□□□□ -2.08
VPS8YAL002W SEF1P34228 1148 aa2.08□□□□□ -2.08
VPS8YAL002W KES1P35844 434 aaKnown RBP2.08□□□□□ -2.08
VPS8YAL002W ECM1P39715 212 aa2.08□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms