RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 hCG_1642624A0A1W2PR95 340 aa11.5□□□□□ -0.57
GTF3C1-212ENST00000570129 SOWAHBA6NEL2 793 aa11.5□□□□□ -0.57
GTF3C1-212ENST00000570129 RBAK-RBAKDNI3L0D1 243 aa11.5□□□□□ -0.57
GTF3C1-212ENST00000570129 NFIBO00712 420 aa11.5□□□□□ -0.57
GTF3C1-212ENST00000570129 SH2B2O14492 632 aaPredicted RBP11.5□□□□□ -0.57
GTF3C1-212ENST00000570129 PRKAR2AP13861 404 aaKnown RBP11.5□□□□□ -0.57
GTF3C1-212ENST00000570129 PRMT2P55345 433 aa11.5□□□□□ -0.57
GTF3C1-212ENST00000570129 CCNA1P78396 465 aa11.5□□□□□ -0.57
GTF3C1-212ENST00000570129 ZNF792Q3KQV3 632 aa11.5□□□□□ -0.57
GTF3C1-212ENST00000570129 DPP9Q86TI2 863 aa11.5□□□□□ -0.57
GTF3C1-212ENST00000570129 IQCA1Q86XH1 822 aa11.5□□□□□ -0.57
GTF3C1-212ENST00000570129 SLAIN1Q8ND83 568 aa11.5□□□□□ -0.57
GTF3C1-212ENST00000570129 SHCBP1Q8NEM2 672 aa11.5□□□□□ -0.57
GTF3C1-212ENST00000570129 GTF3C2Q8WUA4 911 aaPredicted RBP11.5□□□□□ -0.57
GTF3C1-212ENST00000570129 CLEC4DQ8WXI8 215 aa11.5□□□□□ -0.57
GTF3C1-212ENST00000570129 KCNB2Q92953 911 aa11.5□□□□□ -0.57
GTF3C1-212ENST00000570129 LENG1Q96BZ8 264 aaPredicted RBP11.5□□□□□ -0.57
GTF3C1-212ENST00000570129 DEFB118Q96PH6 123 aa11.5□□□□□ -0.57
GTF3C1-212ENST00000570129 TEX13BQ9BXU2 312 aa11.5□□□□□ -0.57
GTF3C1-212ENST00000570129 RANBP17Q9H2T7 1088 aaKnown RBP11.5□□□□□ -0.57
GTF3C1-212ENST00000570129 JMJD4Q9H9V9 463 aa11.5□□□□□ -0.57
GTF3C1-212ENST00000570129 SYNPO2Q9UMS6 1093 aa11.5□□□□□ -0.57
GTF3C1-212ENST00000570129 LAMA4Q16363 1823 aa11.5□□□□□ -0.57
GTF3C1-212ENST00000570129 PARP14Q460N5 1801 aa11.5□□□□□ -0.57
GTF3C1-212ENST00000570129 TNRC18O15417 2968 aaPredicted RBP11.49□□□□□ -0.57
GTF3C1-212ENST00000570129 A0A0G2JMZ2 1700 aa11.49□□□□□ -0.57
GTF3C1-212ENST00000570129 COL11A1P12107 1806 aaPredicted RBP11.49□□□□□ -0.57
GTF3C1-212ENST00000570129 PALM3A6NDB9 673 aaPredicted RBP11.49□□□□□ -0.57
GTF3C1-212ENST00000570129 ATP2A1O14983 1001 aa11.49□□□□□ -0.57
GTF3C1-212ENST00000570129 CYTH3O43739 400 aa11.49□□□□□ -0.57
GTF3C1-212ENST00000570129 PLA2G6O60733 806 aa11.49□□□□□ -0.57
GTF3C1-212ENST00000570129 PLEKHA8P1O95397 391 aa11.49□□□□□ -0.57
GTF3C1-212ENST00000570129 FCER1AP12319 257 aa11.49□□□□□ -0.57
GTF3C1-212ENST00000570129 RGS2P41220 211 aa11.49□□□□□ -0.57
GTF3C1-212ENST00000570129 RGS19P49795 217 aa11.49□□□□□ -0.57
GTF3C1-212ENST00000570129 MNX1P50219 401 aaPredicted RBP11.49□□□□□ -0.57
GTF3C1-212ENST00000570129 TROAPQ12815 778 aa11.49□□□□□ -0.57
GTF3C1-212ENST00000570129 TRDNQ13061 729 aa11.49□□□□□ -0.57
GTF3C1-212ENST00000570129 WTAPQ15007 396 aa11.49□□□□□ -0.57
GTF3C1-212ENST00000570129 MAP3K21Q5TCX8 1036 aa11.49□□□□□ -0.57
GTF3C1-212ENST00000570129 RALYLQ86SE5 291 aaKnown RBP11.49□□□□□ -0.57
GTF3C1-212ENST00000570129 FAM160B2Q86V87 743 aa11.49□□□□□ -0.57
GTF3C1-212ENST00000570129 PXYLP1Q8TE99 480 aa11.49□□□□□ -0.57
GTF3C1-212ENST00000570129 DIS3LQ8TF46 1054 aaKnown RBP11.49□□□□□ -0.57
GTF3C1-212ENST00000570129 TRERF1Q96PN7 1200 aa11.49□□□□□ -0.57
GTF3C1-212ENST00000570129 MROH8Q9H579 483 aa11.49□□□□□ -0.57
GTF3C1-212ENST00000570129 RNF146Q9NTX7 359 aa11.49□□□□□ -0.57
GTF3C1-212ENST00000570129 MKI67P46013 3256 aaKnown RBP11.49□□□□□ -0.57
GTF3C1-212ENST00000570129 DNAJC25-GNG10A0A024R161 153 aa11.48□□□□□ -0.57
GTF3C1-212ENST00000570129 KLRF2D3W0D1 207 aa11.48□□□□□ -0.57
GTF3C1-212ENST00000570129 PPFIA3O75145 1194 aa11.48□□□□□ -0.57
GTF3C1-212ENST00000570129 SLC25A27O95847 323 aa11.48□□□□□ -0.57
GTF3C1-212ENST00000570129 HMGCRP04035 888 aa11.48□□□□□ -0.57
GTF3C1-212ENST00000570129 HOXC6P09630 235 aa11.48□□□□□ -0.57
GTF3C1-212ENST00000570129 PARP1P09874 1014 aaKnown RBP11.48□□□□□ -0.57
GTF3C1-212ENST00000570129 XRCC5P13010 732 aaKnown RBP11.48□□□□□ -0.57
GTF3C1-212ENST00000570129 ZKSCAN1P17029 563 aaPredicted RBP11.48□□□□□ -0.57
GTF3C1-212ENST00000570129 HSPA4P34932 840 aa11.48□□□□□ -0.57
GTF3C1-212ENST00000570129 GRM4Q14833 912 aa11.48□□□□□ -0.57
GTF3C1-212ENST00000570129 USH1GQ495M9 461 aa11.48□□□□□ -0.57
GTF3C1-212ENST00000570129 NUP133Q8WUM0 1156 aa11.48□□□□□ -0.57
GTF3C1-212ENST00000570129 MAML3Q96JK9 1138 aa11.48□□□□□ -0.57
GTF3C1-212ENST00000570129 JAKMIP1Q96N16 626 aaKnown RBP11.48□□□□□ -0.57
GTF3C1-212ENST00000570129 NEK1Q96PY6 1258 aa11.48□□□□□ -0.57
GTF3C1-212ENST00000570129 APBA2Q99767 749 aa11.48□□□□□ -0.57
GTF3C1-212ENST00000570129 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.48□□□□□ -0.57
GTF3C1-212ENST00000570129 A1CFQ9NQ94 594 aaKnown RBP11.48□□□□□ -0.57
GTF3C1-212ENST00000570129 CCPG1Q9ULG6 757 aa11.48□□□□□ -0.57
GTF3C1-212ENST00000570129 CTDP1Q9Y5B0 961 aaPredicted RBP11.48□□□□□ -0.57
GTF3C1-212ENST00000570129 IVNS1ABPQ9Y6Y0 642 aa11.48□□□□□ -0.57
GTF3C1-212ENST00000570129 OPLAHO14841 1288 aa11.47□□□□□ -0.57
GTF3C1-212ENST00000570129 ADCY6O43306 1168 aa11.47□□□□□ -0.57
GTF3C1-212ENST00000570129 SNAI1O95863 264 aaPredicted RBP11.47□□□□□ -0.57
GTF3C1-212ENST00000570129 MCM5P33992 734 aa11.47□□□□□ -0.57
GTF3C1-212ENST00000570129 BAATQ14032 418 aaPredicted RBP11.47□□□□□ -0.57
GTF3C1-212ENST00000570129 QRICH1Q2TAL8 776 aa11.47□□□□□ -0.57
GTF3C1-212ENST00000570129 TSGA10IPQ3SY00 556 aa11.47□□□□□ -0.57
GTF3C1-212ENST00000570129 LHX8Q68G74 356 aa11.47□□□□□ -0.57
GTF3C1-212ENST00000570129 SLC30A10Q6XR72 485 aa11.47□□□□□ -0.57
GTF3C1-212ENST00000570129 ZNF654Q8IZM8 581 aa11.47□□□□□ -0.57
GTF3C1-212ENST00000570129 CCDC82Q8N4S0 544 aa11.47□□□□□ -0.57
GTF3C1-212ENST00000570129 SRBD1Q8N5C6 995 aaKnown RBP11.47□□□□□ -0.57
GTF3C1-212ENST00000570129 U2AF1L4Q8WU68 220 aaKnown RBP11.47□□□□□ -0.57
GTF3C1-212ENST00000570129 SOCS4Q8WXH5 440 aa11.47□□□□□ -0.57
GTF3C1-212ENST00000570129 PIGSQ96S52 555 aa11.47□□□□□ -0.57
GTF3C1-212ENST00000570129 TMEM106CQ9BVX2 250 aa11.47□□□□□ -0.57
GTF3C1-212ENST00000570129 PAK6Q9NQU5 681 aaPredicted RBP11.47□□□□□ -0.57
GTF3C1-212ENST00000570129 FAM217BQ9NTX9 383 aaPredicted RBP11.47□□□□□ -0.57
GTF3C1-212ENST00000570129 STRNO43815 780 aa11.46□□□□□ -0.57
GTF3C1-212ENST00000570129 ICAM1P05362 532 aa11.46□□□□□ -0.57
GTF3C1-212ENST00000570129 GJB1P08034 283 aa11.46□□□□□ -0.57
GTF3C1-212ENST00000570129 CNGA1P29973 690 aa11.46□□□□□ -0.57
GTF3C1-212ENST00000570129 APOBRQ0VD83 1088 aa11.46□□□□□ -0.57
GTF3C1-212ENST00000570129 KCTD2Q14681 263 aa11.46□□□□□ -0.57
GTF3C1-212ENST00000570129 CDC37Q16543 378 aaPredicted RBP11.46□□□□□ -0.57
GTF3C1-212ENST00000570129 PPP4R3BQ5MIZ7 849 aa11.46□□□□□ -0.57
GTF3C1-212ENST00000570129 CASC1Q6TDU7 716 aa11.46□□□□□ -0.57
GTF3C1-212ENST00000570129 NSMFQ6X4W1 530 aa11.46□□□□□ -0.57
GTF3C1-212ENST00000570129 ANKRD35Q8N283 1001 aa11.46□□□□□ -0.57
GTF3C1-212ENST00000570129 DDX11Q96FC9 970 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms