RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 TAL1P17542 331 aaPredicted RBP23.29■■□□□ 1.32
TSPAN3-210ENST00000561277 SLC5A4Q9NY91 659 aa23.29■■□□□ 1.32
TSPAN3-210ENST00000561277 PARP1P09874 1014 aaKnown RBP23.28■■□□□ 1.32
TSPAN3-210ENST00000561277 ALAS1P13196 640 aa23.28■■□□□ 1.32
TSPAN3-210ENST00000561277 MCM5P33992 734 aa23.28■■□□□ 1.32
TSPAN3-210ENST00000561277 ASPRV1Q53RT3 343 aa23.28■■□□□ 1.32
TSPAN3-210ENST00000561277 GPHNQ9NQX3 736 aaPredicted RBP23.28■■□□□ 1.32
TSPAN3-210ENST00000561277 RNF146Q9NTX7 359 aa23.28■■□□□ 1.32
TSPAN3-210ENST00000561277 CCPG1Q9ULG6 757 aa23.28■■□□□ 1.32
TSPAN3-210ENST00000561277 RGS19P49795 217 aa23.27■■□□□ 1.32
TSPAN3-210ENST00000561277 MFSD14CQ5VZR4 134 aa23.27■■□□□ 1.32
TSPAN3-210ENST00000561277 RASEFQ8IZ41 740 aa23.27■■□□□ 1.32
TSPAN3-210ENST00000561277 CHST13Q8NET6 341 aa23.27■■□□□ 1.32
TSPAN3-210ENST00000561277 IGDCC4Q8TDY8 1250 aa23.27■■□□□ 1.32
TSPAN3-210ENST00000561277 DDX11Q96FC9 970 aa23.27■■□□□ 1.32
TSPAN3-210ENST00000561277 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.27■■□□□ 1.324e-7■■■□□ 14.7
TSPAN3-210ENST00000561277 HMX1Q9NP08 348 aaPredicted RBP23.27■■□□□ 1.32
TSPAN3-210ENST00000561277 FBXO40Q9UH90 709 aa23.27■■□□□ 1.32
TSPAN3-210ENST00000561277 ICAM1P05362 532 aa23.27■■□□□ 1.32
TSPAN3-210ENST00000561277 GJB1P08034 283 aa23.27■■□□□ 1.32
TSPAN3-210ENST00000561277 CYP2C19P33261 490 aa23.27■■□□□ 1.32
TSPAN3-210ENST00000561277 CACNB2Q08289 660 aaPredicted RBP23.27■■□□□ 1.32
TSPAN3-210ENST00000561277 ANKRD35Q8N283 1001 aa23.27■■□□□ 1.32
TSPAN3-210ENST00000561277 ACAD9Q9H845 621 aa23.27■■□□□ 1.32
TSPAN3-210ENST00000561277 RPTORQ8N122 1335 aa23.26■■□□□ 1.31
TSPAN3-210ENST00000561277 ZNFX1Q9P2E3 1918 aaKnown RBP23.26■■□□□ 1.31
TSPAN3-210ENST00000561277 DHX16O60231 1041 aaKnown RBP23.26■■□□□ 1.31
TSPAN3-210ENST00000561277 MAP3K21Q5TCX8 1036 aa23.26■■□□□ 1.31
TSPAN3-210ENST00000561277 STAG2Q8N3U4 1231 aa23.26■■□□□ 1.31
TSPAN3-210ENST00000561277 MAML3Q96JK9 1138 aa23.26■■□□□ 1.31
TSPAN3-210ENST00000561277 DEFB118Q96PH6 123 aa23.26■■□□□ 1.31
TSPAN3-210ENST00000561277 TRERF1Q96PN7 1200 aa23.26■■□□□ 1.31
TSPAN3-210ENST00000561277 LRRC2Q9BYS8 371 aa23.26■■□□□ 1.31
TSPAN3-210ENST00000561277 LY9Q9HBG7 655 aa23.26■■□□□ 1.31
TSPAN3-210ENST00000561277 TKFCQ3LXA3 575 aa23.25■■□□□ 1.31
TSPAN3-210ENST00000561277 ADCK5Q3MIX3 580 aa23.25■■□□□ 1.31
TSPAN3-210ENST00000561277 OLFML2BQ68BL8 750 aa23.25■■□□□ 1.31
TSPAN3-210ENST00000561277 U2AF1L4Q8WU68 220 aaKnown RBP23.25■■□□□ 1.31
TSPAN3-210ENST00000561277 NEK1Q96PY6 1258 aa23.25■■□□□ 1.31
TSPAN3-210ENST00000561277 PAK6Q9NQU5 681 aaPredicted RBP23.25■■□□□ 1.31
TSPAN3-210ENST00000561277 SH2B2O14492 632 aaPredicted RBP23.24■■□□□ 1.31
TSPAN3-210ENST00000561277 GJA8P48165 433 aa23.24■■□□□ 1.31
TSPAN3-210ENST00000561277 MLLT1Q03111 559 aaPredicted RBP23.24■■□□□ 1.31
TSPAN3-210ENST00000561277 ZNF792Q3KQV3 632 aa23.24■■□□□ 1.31
TSPAN3-210ENST00000561277 NFXL1Q6ZNB6 911 aa23.24■■□□□ 1.31
TSPAN3-210ENST00000561277 CATIPQ7Z7H3 387 aa23.24■■□□□ 1.31
TSPAN3-210ENST00000561277 ADGRF4Q8IZF3 695 aa23.24■■□□□ 1.31
TSPAN3-210ENST00000561277 SHISA4Q96DD7 197 aa23.24■■□□□ 1.31
TSPAN3-210ENST00000561277 TMEM87BQ96K49 555 aa23.24■■□□□ 1.31
TSPAN3-210ENST00000561277 MAD2L2Q9UI95 211 aa23.24■■□□□ 1.31
TSPAN3-210ENST00000561277 PLXNA1Q9UIW2 1896 aa23.24■■□□□ 1.31
TSPAN3-210ENST00000561277 KLRF2D3W0D1 207 aa23.23■■□□□ 1.31
TSPAN3-210ENST00000561277 CCND3P30281 292 aaPredicted RBP23.23■■□□□ 1.31
TSPAN3-210ENST00000561277 HSPA4P34932 840 aa23.23■■□□□ 1.31
TSPAN3-210ENST00000561277 KRT32Q14532 448 aa23.23■■□□□ 1.31
TSPAN3-210ENST00000561277 CDC37Q16543 378 aaPredicted RBP23.23■■□□□ 1.31
TSPAN3-210ENST00000561277 MUM1L1Q5H9M0 696 aa23.23■■□□□ 1.31
TSPAN3-210ENST00000561277 NUP133Q8WUM0 1156 aa23.23■■□□□ 1.31
TSPAN3-210ENST00000561277 MYL10Q9BUA6 226 aa23.23■■□□□ 1.31
TSPAN3-210ENST00000561277 VAT1LQ9HCJ6 419 aa23.23■■□□□ 1.31
TSPAN3-210ENST00000561277 TROAPQ12815 778 aa23.23■■□□□ 1.31
TSPAN3-210ENST00000561277 GRM4Q14833 912 aa23.23■■□□□ 1.31
TSPAN3-210ENST00000561277 TSGA10IPQ3SY00 556 aa23.23■■□□□ 1.31
TSPAN3-210ENST00000561277 TCEANC2Q96MN5 208 aa23.23■■□□□ 1.31
TSPAN3-210ENST00000561277 MTA3Q9BTC8 594 aa23.23■■□□□ 1.31
TSPAN3-210ENST00000561277 A1CFQ9NQ94 594 aaKnown RBP23.23■■□□□ 1.31
TSPAN3-210ENST00000561277 SGPL1O95470 568 aa23.22■■□□□ 1.31
TSPAN3-210ENST00000561277 USH1GQ495M9 461 aa23.22■■□□□ 1.31
TSPAN3-210ENST00000561277 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.22■■□□□ 1.31
TSPAN3-210ENST00000561277 ZNF654Q8IZM8 581 aa23.22■■□□□ 1.31
TSPAN3-210ENST00000561277 SMCHD1A6NHR9 2005 aa23.21■■□□□ 1.31
TSPAN3-210ENST00000561277 DNAJC25-GNG10A0A024R161 153 aa23.21■■□□□ 1.31
TSPAN3-210ENST00000561277 PALM3A6NDB9 673 aaPredicted RBP23.21■■□□□ 1.31
TSPAN3-210ENST00000561277 CCDC69A6NI79 296 aa23.21■■□□□ 1.31
TSPAN3-210ENST00000561277 CNGA1P29973 690 aa23.21■■□□□ 1.31
TSPAN3-210ENST00000561277 NSMFQ6X4W1 530 aa23.21■■□□□ 1.31
TSPAN3-210ENST00000561277 DIS3Q9Y2L1 958 aaKnown RBP23.21■■□□□ 1.31
TSPAN3-210ENST00000561277 SNX14Q9Y5W7 946 aa23.21■■□□□ 1.31
TSPAN3-210ENST00000561277 WDR19Q8NEZ3 1342 aa23.21■■□□□ 1.31
TSPAN3-210ENST00000561277 IGHA2P01877 340 aa23.2■■□□□ 1.3
TSPAN3-210ENST00000561277 TFRCP02786 760 aaKnown RBP23.2■■□□□ 1.3
TSPAN3-210ENST00000561277 TMTC2Q8N394 836 aa23.2■■□□□ 1.3
TSPAN3-210ENST00000561277 JMJD4Q9H9V9 463 aa23.2■■□□□ 1.3
TSPAN3-210ENST00000561277 POTEB2H3BUK9 544 aa23.19■■□□□ 1.3
TSPAN3-210ENST00000561277 NFIBO00712 420 aa23.19■■□□□ 1.3
TSPAN3-210ENST00000561277 TNRC18O15417 2968 aaPredicted RBP23.19■■□□□ 1.3
TSPAN3-210ENST00000561277 LIFRP42702 1097 aa23.19■■□□□ 1.3
TSPAN3-210ENST00000561277 CNTN2Q02246 1040 aa23.19■■□□□ 1.3
TSPAN3-210ENST00000561277 QRICH1Q2TAL8 776 aa23.19■■□□□ 1.3
TSPAN3-210ENST00000561277 PRAMEF19Q5SWL8 479 aa23.19■■□□□ 1.3
TSPAN3-210ENST00000561277 DHX32Q7L7V1 743 aaKnown RBP23.19■■□□□ 1.3
TSPAN3-210ENST00000561277 RAB11FIP4Q86YS3 637 aa23.19■■□□□ 1.3
TSPAN3-210ENST00000561277 TRPV1Q8NER1 839 aa23.19■■□□□ 1.3
TSPAN3-210ENST00000561277 KCNB2Q92953 911 aa23.19■■□□□ 1.3
TSPAN3-210ENST00000561277 JAKMIP1Q96N16 626 aaKnown RBP23.19■■□□□ 1.3
TSPAN3-210ENST00000561277 TINF2Q9BSI4 451 aa23.19■■□□□ 1.3
TSPAN3-210ENST00000561277 PNMA2Q9UL42 364 aa23.19■■□□□ 1.3
TSPAN3-210ENST00000561277 PFASO15067 1338 aa23.19■■□□□ 1.3
TSPAN3-210ENST00000561277 DDAH1O94760 285 aa23.18■■□□□ 1.3
TSPAN3-210ENST00000561277 CYBAP13498 195 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms