RNA–Protein interactions for RNA: ENST00000556636.5

GABRB3-211, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-211ENST00000556636 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.57□□□□□ -0.4
GABRB3-211ENST00000556636 CPVLQ9H3G5 476 aa12.57□□□□□ -0.4
GABRB3-211ENST00000556636 KAT14Q9H8E8 782 aa12.57□□□□□ -0.4
GABRB3-211ENST00000556636 HMX1Q9NP08 348 aaPredicted RBP12.57□□□□□ -0.4
GABRB3-211ENST00000556636 GPHNQ9NQX3 736 aaPredicted RBP12.57□□□□□ -0.4
GABRB3-211ENST00000556636 ISY1Q9ULR0 285 aaKnown RBP12.57□□□□□ -0.4
GABRB3-211ENST00000556636 DIS3Q9Y2L1 958 aaKnown RBP12.57□□□□□ -0.4
GABRB3-211ENST00000556636 LAMA4Q16363 1823 aa12.56□□□□□ -0.4
GABRB3-211ENST00000556636 IFIT3O14879 490 aaKnown RBP12.56□□□□□ -0.4
GABRB3-211ENST00000556636 TAL1P17542 331 aaPredicted RBP12.56□□□□□ -0.4
GABRB3-211ENST00000556636 CCND3P30281 292 aaPredicted RBP12.56□□□□□ -0.4
GABRB3-211ENST00000556636 SLC4A3P48751 1232 aa12.56□□□□□ -0.4
GABRB3-211ENST00000556636 KCTD2Q14681 263 aa12.56□□□□□ -0.4
GABRB3-211ENST00000556636 TSGA10IPQ3SY00 556 aa12.56□□□□□ -0.4
GABRB3-211ENST00000556636 GPATCH4Q5T3I0 446 aaKnown RBP12.56□□□□□ -0.4
GABRB3-211ENST00000556636 IFIT1BQ5T764 474 aaKnown RBP12.56□□□□□ -0.4
GABRB3-211ENST00000556636 CCDC174Q6PII3 467 aa12.56□□□□□ -0.4
GABRB3-211ENST00000556636 STAG2Q8N3U4 1231 aa12.56□□□□□ -0.4
GABRB3-211ENST00000556636 MAML3Q96JK9 1138 aa12.56□□□□□ -0.4
GABRB3-211ENST00000556636 FGD4Q96M96 766 aa12.56□□□□□ -0.4
GABRB3-211ENST00000556636 CTDP1Q9Y5B0 961 aaPredicted RBP12.56□□□□□ -0.4
GABRB3-211ENST00000556636 ICAM1P05362 532 aa12.55□□□□□ -0.4
GABRB3-211ENST00000556636 MNX1P50219 401 aaPredicted RBP12.55□□□□□ -0.4
GABRB3-211ENST00000556636 TROAPQ12815 778 aa12.55□□□□□ -0.4
GABRB3-211ENST00000556636 SLC35G1Q2M3R5 365 aa12.55□□□□□ -0.4
GABRB3-211ENST00000556636 TKFCQ3LXA3 575 aa12.55□□□□□ -0.4
GABRB3-211ENST00000556636 MUM1L1Q5H9M0 696 aa12.55□□□□□ -0.4
GABRB3-211ENST00000556636 PRAMEF19Q5SWL8 479 aa12.55□□□□□ -0.4
GABRB3-211ENST00000556636 MFSD14CQ5VZR4 134 aa12.55□□□□□ -0.4
GABRB3-211ENST00000556636 LHX8Q68G74 356 aa12.55□□□□□ -0.4
GABRB3-211ENST00000556636 CASC1Q6TDU7 716 aa12.55□□□□□ -0.4
GABRB3-211ENST00000556636 RALYLQ86SE5 291 aaKnown RBP12.55□□□□□ -0.4
GABRB3-211ENST00000556636 KCNB2Q92953 911 aa12.55□□□□□ -0.4
GABRB3-211ENST00000556636 TRERF1Q96PN7 1200 aa12.55□□□□□ -0.4
GABRB3-211ENST00000556636 FBXO40Q9UH90 709 aa12.55□□□□□ -0.4
GABRB3-211ENST00000556636 COL11A1P12107 1806 aaPredicted RBP12.55□□□□□ -0.4
GABRB3-211ENST00000556636 PALM3A6NDB9 673 aaPredicted RBP12.54□□□□□ -0.4
GABRB3-211ENST00000556636 ALAS1P13196 640 aa12.54□□□□□ -0.4
GABRB3-211ENST00000556636 CYBAP13498 195 aa12.54□□□□□ -0.4
GABRB3-211ENST00000556636 ADCK5Q3MIX3 580 aa12.54□□□□□ -0.4
GABRB3-211ENST00000556636 ASPRV1Q53RT3 343 aa12.54□□□□□ -0.4
GABRB3-211ENST00000556636 ADGRF4Q8IZF3 695 aa12.54□□□□□ -0.4
GABRB3-211ENST00000556636 CLEC4DQ8WXI8 215 aa12.54□□□□□ -0.4
GABRB3-211ENST00000556636 MTA3Q9BTC8 594 aa12.54□□□□□ -0.4
GABRB3-211ENST00000556636 LY9Q9HBG7 655 aa12.54□□□□□ -0.4
GABRB3-211ENST00000556636 A1CFQ9NQ94 594 aaKnown RBP12.54□□□□□ -0.4
GABRB3-211ENST00000556636 HOMER2Q9NSB8 354 aa12.54□□□□□ -0.4
GABRB3-211ENST00000556636 RNF146Q9NTX7 359 aa12.54□□□□□ -0.4
GABRB3-211ENST00000556636 SLC5A4Q9NY91 659 aa12.54□□□□□ -0.4
GABRB3-211ENST00000556636 MAD2L2Q9UI95 211 aa12.54□□□□□ -0.4
GABRB3-211ENST00000556636 OGDHLQ9ULD0 1010 aa12.54□□□□□ -0.4
GABRB3-211ENST00000556636 PRC1O43663 620 aa12.53□□□□□ -0.4
GABRB3-211ENST00000556636 SNAI1O95863 264 aaPredicted RBP12.53□□□□□ -0.4
GABRB3-211ENST00000556636 TFRCP02786 760 aaKnown RBP12.53□□□□□ -0.4
GABRB3-211ENST00000556636 PARP1P09874 1014 aaKnown RBP12.53□□□□□ -0.4
GABRB3-211ENST00000556636 CAPN2P17655 700 aa12.53□□□□□ -0.4
GABRB3-211ENST00000556636 MCM5P33992 734 aa12.53□□□□□ -0.4
GABRB3-211ENST00000556636 EXOSC10Q01780 885 aaKnown RBP12.53□□□□□ -0.4
GABRB3-211ENST00000556636 WTAPQ15007 396 aa12.53□□□□□ -0.4
GABRB3-211ENST00000556636 TMEM67Q5HYA8 995 aa12.53□□□□□ -0.4
GABRB3-211ENST00000556636 MAMDC4Q6UXC1 1216 aa12.53□□□□□ -0.4
GABRB3-211ENST00000556636 ANKRD35Q8N283 1001 aa12.53□□□□□ -0.4
GABRB3-211ENST00000556636 FAM133AQ8N9E0 248 aa12.53□□□□□ -0.4
GABRB3-211ENST00000556636 MTMR8Q96EF0 704 aa12.53□□□□□ -0.4
GABRB3-211ENST00000556636 DDX11Q96FC9 970 aa12.53□□□□□ -0.4
GABRB3-211ENST00000556636 NEK1Q96PY6 1258 aa12.53□□□□□ -0.4
GABRB3-211ENST00000556636 TINF2Q9BSI4 451 aa12.53□□□□□ -0.4
GABRB3-211ENST00000556636 ACAD9Q9H845 621 aa12.53□□□□□ -0.4
GABRB3-211ENST00000556636 JMJD4Q9H9V9 463 aa12.53□□□□□ -0.4
GABRB3-211ENST00000556636 CCPG1Q9ULG6 757 aa12.53□□□□□ -0.4
GABRB3-211ENST00000556636 ERICH2A1L162 156 aa12.52□□□□□ -0.41
GABRB3-211ENST00000556636 SOWAHBA6NEL2 793 aa12.52□□□□□ -0.41
GABRB3-211ENST00000556636 KLRF2D3W0D1 207 aa12.52□□□□□ -0.41
GABRB3-211ENST00000556636 SH2B2O14492 632 aaPredicted RBP12.52□□□□□ -0.41
GABRB3-211ENST00000556636 HSPA4P34932 840 aa12.52□□□□□ -0.41
GABRB3-211ENST00000556636 CNTN2Q02246 1040 aa12.52□□□□□ -0.41
GABRB3-211ENST00000556636 GRM4Q14833 912 aa12.52□□□□□ -0.41
GABRB3-211ENST00000556636 RNF20Q5VTR2 975 aa12.52□□□□□ -0.41
GABRB3-211ENST00000556636 ZNF467Q7Z7K2 595 aaPredicted RBP12.52□□□□□ -0.41
GABRB3-211ENST00000556636 TMEM87BQ96K49 555 aa12.52□□□□□ -0.41
GABRB3-211ENST00000556636 PURBQ96QR8 312 aaKnown RBP12.52□□□□□ -0.41
GABRB3-211ENST00000556636 VAT1LQ9HCJ6 419 aa12.52□□□□□ -0.41
GABRB3-211ENST00000556636 ZNF236Q9UL36 1845 aa12.52□□□□□ -0.41
GABRB3-211ENST00000556636 ASTN1O14525 1302 aa12.52□□□□□ -0.41
GABRB3-211ENST00000556636 WDR19Q8NEZ3 1342 aa12.52□□□□□ -0.41
GABRB3-211ENST00000556636 TNRC18O15417 2968 aaPredicted RBP12.52□□□□□ -0.41
GABRB3-211ENST00000556636 SMCHD1A6NHR9 2005 aa12.52□□□□□ -0.41
GABRB3-211ENST00000556636 RBBP6Q7Z6E9 1792 aaKnown RBP12.51□□□□□ -0.41
GABRB3-211ENST00000556636 NFIBO00712 420 aa12.51□□□□□ -0.41
GABRB3-211ENST00000556636 CYTH3O43739 400 aa12.51□□□□□ -0.41
GABRB3-211ENST00000556636 ZNF865P0CJ78 1059 aaPredicted RBP12.51□□□□□ -0.41
GABRB3-211ENST00000556636 LIFRP42702 1097 aa12.51□□□□□ -0.41
GABRB3-211ENST00000556636 SART3Q15020 963 aaKnown RBP12.51□□□□□ -0.41
GABRB3-211ENST00000556636 TMTC2Q8N394 836 aa12.51□□□□□ -0.41
GABRB3-211ENST00000556636 MSL3Q8N5Y2 521 aaKnown RBP12.51□□□□□ -0.41
GABRB3-211ENST00000556636 USP26Q9BXU7 913 aa12.51□□□□□ -0.41
GABRB3-211ENST00000556636 LRRC2Q9BYS8 371 aa12.51□□□□□ -0.41
GABRB3-211ENST00000556636 RIOX1Q9H6W3 641 aa12.51□□□□□ -0.41
GABRB3-211ENST00000556636 CYP39A1Q9NYL5 469 aa12.51□□□□□ -0.41
GABRB3-211ENST00000556636 DDX20Q9UHI6 824 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms