RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-228ENST00000554592 ZNF157P51786 506 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-228ENST00000554592 RNF43Q68DV7 783 aa6.59□□□□□ -1.35
ATXN3-228ENST00000554592 CDPF1Q6NVV7 123 aa6.59□□□□□ -1.35
ATXN3-228ENST00000554592 DTHD1Q6ZMT9 781 aa6.59□□□□□ -1.35
ATXN3-228ENST00000554592 ZDHHC13Q8IUH4 622 aa6.59□□□□□ -1.35
ATXN3-228ENST00000554592 KRTAP9-2Q9BYQ4 174 aa6.59□□□□□ -1.35
ATXN3-228ENST00000554592 GSX1Q9H4S2 264 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-228ENST00000554592 RGPD2P0DJD1 1756 aa6.59□□□□□ -1.35
ATXN3-228ENST00000554592 SYNGAP1Q96PV0 1343 aa6.58□□□□□ -1.36
ATXN3-228ENST00000554592 WDR33Q9C0J8 1336 aaKnown RBP6.58□□□□□ -1.36
ATXN3-228ENST00000554592 PCNTO95613 3336 aa6.58□□□□□ -1.36
ATXN3-228ENST00000554592 PRR19A6NJB7 356 aa6.58□□□□□ -1.36
ATXN3-228ENST00000554592 GSC2O15499 205 aa6.58□□□□□ -1.36
ATXN3-228ENST00000554592 HYAL3O43820 417 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-228ENST00000554592 STARD3NLO95772 234 aa6.58□□□□□ -1.36
ATXN3-228ENST00000554592 CTSHP09668 335 aa6.58□□□□□ -1.36
ATXN3-228ENST00000554592 ADH5P11766 374 aa6.58□□□□□ -1.36
ATXN3-228ENST00000554592 XRCC5P13010 732 aaKnown RBP6.58□□□□□ -1.36
ATXN3-228ENST00000554592 TCF3P15923 654 aa6.58□□□□□ -1.36
ATXN3-228ENST00000554592 MAP4P27816 1152 aaKnown RBP6.58□□□□□ -1.36
ATXN3-228ENST00000554592 TNNT2P45379 298 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-228ENST00000554592 AP3B2Q13367 1082 aa6.58□□□□□ -1.36
ATXN3-228ENST00000554592 LRP8Q14114 963 aa6.58□□□□□ -1.36
ATXN3-228ENST00000554592 PDZD3Q86UT5 571 aa6.58□□□□□ -1.36
ATXN3-228ENST00000554592 PNMA8AQ86V59 439 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-228ENST00000554592 CNTROBQ8N137 903 aa6.58□□□□□ -1.36
ATXN3-228ENST00000554592 STK35Q8TDR2 534 aa6.58□□□□□ -1.36
ATXN3-228ENST00000554592 EZH1Q92800 747 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-228ENST00000554592 WDR89Q96FK6 387 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-228ENST00000554592 SLC52A2Q9HAB3 445 aa6.58□□□□□ -1.36
ATXN3-228ENST00000554592 ZFYVE1Q9HBF4 777 aa6.58□□□□□ -1.36
ATXN3-228ENST00000554592 HACL1Q9UJ83 578 aa6.58□□□□□ -1.36
ATXN3-228ENST00000554592 ZBTB1Q9Y2K1 713 aa6.58□□□□□ -1.36
ATXN3-228ENST00000554592 GIPC1O14908 333 aa6.57□□□□□ -1.36
ATXN3-228ENST00000554592 ZNF862O60290 1169 aa6.57□□□□□ -1.36
ATXN3-228ENST00000554592 MED26O95402 600 aa6.57□□□□□ -1.36
ATXN3-228ENST00000554592 EIF4BP23588 611 aaKnown RBP6.57□□□□□ -1.36
ATXN3-228ENST00000554592 CANXP27824 592 aaKnown RBP6.57□□□□□ -1.36
ATXN3-228ENST00000554592 EPHX2P34913 555 aa6.57□□□□□ -1.36
ATXN3-228ENST00000554592 EIF5P55010 431 aaKnown RBP6.57□□□□□ -1.36
ATXN3-228ENST00000554592 AKAP4Q5JQC9 854 aa6.57□□□□□ -1.36
ATXN3-228ENST00000554592 SULT6B1Q6IMI4 303 aa6.57□□□□□ -1.36
ATXN3-228ENST00000554592 STYK1Q6J9G0 422 aa6.57□□□□□ -1.36
ATXN3-228ENST00000554592 PRR5LQ6MZQ0 368 aa6.57□□□□□ -1.36
ATXN3-228ENST00000554592 MASTLQ96GX5 879 aa6.57□□□□□ -1.36
ATXN3-228ENST00000554592 DBNDD2Q9BQY9 259 aa6.57□□□□□ -1.36
ATXN3-228ENST00000554592 CORO1BQ9BR76 489 aa6.57□□□□□ -1.36
ATXN3-228ENST00000554592 WDR18Q9BV38 432 aa6.57□□□□□ -1.36
ATXN3-228ENST00000554592 KCNF1Q9H3M0 494 aa6.57□□□□□ -1.36
ATXN3-228ENST00000554592 CCDC86Q9H6F5 360 aaKnown RBP6.57□□□□□ -1.36
ATXN3-228ENST00000554592 C12orf49Q9H741 205 aa6.57□□□□□ -1.36
ATXN3-228ENST00000554592 LGR6Q9HBX8 967 aa6.57□□□□□ -1.36
ATXN3-228ENST00000554592 PPP4R2Q9NY27 417 aa6.57□□□□□ -1.36
ATXN3-228ENST00000554592 ABT1Q9ULW3 272 aaKnown RBP6.57□□□□□ -1.36
ATXN3-228ENST00000554592 ACTL7BQ9Y614 415 aa6.57□□□□□ -1.36
ATXN3-228ENST00000554592 TNRC6CQ9HCJ0 1690 aaKnown RBP6.57□□□□□ -1.36
ATXN3-228ENST00000554592 ITGB4P16144 1822 aa6.57□□□□□ -1.36
ATXN3-228ENST00000554592 PKD1L3Q7Z443 1732 aa6.56□□□□□ -1.36
ATXN3-228ENST00000554592 KRTAP9-6A0A140TA67 174 aa6.56□□□□□ -1.36
ATXN3-228ENST00000554592 RNMTO43148 476 aaKnown RBP6.56□□□□□ -1.36
ATXN3-228ENST00000554592 GAS2O43903 313 aaKnown RBP6.56□□□□□ -1.36
ATXN3-228ENST00000554592 AOC2O75106 756 aa6.56□□□□□ -1.36
ATXN3-228ENST00000554592 SRGNP10124 158 aa6.56□□□□□ -1.36
ATXN3-228ENST00000554592 ECE1P42892 770 aa6.56□□□□□ -1.36
ATXN3-228ENST00000554592 SLC39A6Q13433 755 aa6.56□□□□□ -1.36
ATXN3-228ENST00000554592 TBC1D9BQ66K14 1250 aa6.56□□□□□ -1.36
ATXN3-228ENST00000554592 SHISA5Q8N114 240 aa6.56□□□□□ -1.36
ATXN3-228ENST00000554592 TMEM87AQ8NBN3 555 aa6.56□□□□□ -1.36
ATXN3-228ENST00000554592 FBLIM1Q8WUP2 373 aa6.56□□□□□ -1.36
ATXN3-228ENST00000554592 GPR101Q96P66 508 aaPredicted RBP6.56□□□□□ -1.36
ATXN3-228ENST00000554592 TEX13AQ9BXU3 409 aaPredicted RBP6.56□□□□□ -1.36
ATXN3-228ENST00000554592 ZFP64Q9NPA5 681 aa6.56□□□□□ -1.36
ATXN3-228ENST00000554592 TMEM39AQ9NV64 488 aa6.56□□□□□ -1.36
ATXN3-228ENST00000554592 PCDHGC5Q9Y5F6 944 aa6.56□□□□□ -1.36
ATXN3-228ENST00000554592 COL15A1P39059 1388 aa6.56□□□□□ -1.36
ATXN3-228ENST00000554592 ARFGEF1Q9Y6D6 1849 aa6.55□□□□□ -1.36
ATXN3-228ENST00000554592 SCAMP3O14828 347 aaKnown RBP6.55□□□□□ -1.36
ATXN3-228ENST00000554592 NPHP1O15259 732 aa6.55□□□□□ -1.36
ATXN3-228ENST00000554592 TGFB1P01137 390 aa6.55□□□□□ -1.36
ATXN3-228ENST00000554592 MAP2K2P36507 400 aa6.55□□□□□ -1.36
ATXN3-228ENST00000554592 CD97P48960 835 aa6.55□□□□□ -1.36
ATXN3-228ENST00000554592 ST5P78524 1137 aa6.55□□□□□ -1.36
ATXN3-228ENST00000554592 CCDC93Q567U6 631 aa6.55□□□□□ -1.36
ATXN3-228ENST00000554592 MAP1SQ66K74 1059 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-228ENST00000554592 RTKN2Q8IZC4 609 aa6.55□□□□□ -1.36
ATXN3-228ENST00000554592 CNBD1Q8NA66 436 aa6.55□□□□□ -1.36
ATXN3-228ENST00000554592 NECAB3Q96P71 396 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-228ENST00000554592 SRCIN1Q9C0H9 1055 aa6.55□□□□□ -1.36
ATXN3-228ENST00000554592 DDX21Q9NR30 783 aaKnown RBP eCLIP6.55□□□□□ -1.36
ATXN3-228ENST00000554592 FAM105AQ9NUU6 356 aa6.55□□□□□ -1.36
ATXN3-228ENST00000554592 CACNA2D2Q9NY47 1150 aa6.55□□□□□ -1.36
ATXN3-228ENST00000554592 PPP1R9AQ9ULJ8 1098 aa6.55□□□□□ -1.36
ATXN3-228ENST00000554592 CARMIL3Q8ND23 1372 aa6.55□□□□□ -1.36
ATXN3-228ENST00000554592 ZNF831Q5JPB2 1677 aa6.55□□□□□ -1.36
ATXN3-228ENST00000554592 FZD9O00144 591 aa6.54□□□□□ -1.36
ATXN3-228ENST00000554592 GSTP1P09211 210 aaKnown RBP6.54□□□□□ -1.36
ATXN3-228ENST00000554592 USP17L7P0C7H9 530 aa6.54□□□□□ -1.36
ATXN3-228ENST00000554592 LIG1P18858 919 aa6.54□□□□□ -1.36
ATXN3-228ENST00000554592 IL13P35225 146 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms