RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 ICAM1P05362 532 aa30.3■■■□□ 2.44
CPSF6-205ENST00000550075 TSGA10IPQ3SY00 556 aa30.3■■■□□ 2.44
CPSF6-205ENST00000550075 OLFML2BQ68BL8 750 aa30.3■■■□□ 2.44
CPSF6-205ENST00000550075 CATIPQ7Z7H3 387 aa30.3■■■□□ 2.44
CPSF6-205ENST00000550075 DDX11Q96FC9 970 aa30.3■■■□□ 2.44
CPSF6-205ENST00000550075 HMX1Q9NP08 348 aaPredicted RBP30.3■■■□□ 2.44
CPSF6-205ENST00000550075 HOMER2Q9NSB8 354 aa30.3■■■□□ 2.44
CPSF6-205ENST00000550075 RNF146Q9NTX7 359 aa30.3■■■□□ 2.44
CPSF6-205ENST00000550075 RPTORQ8N122 1335 aa30.29■■■□□ 2.44
CPSF6-205ENST00000550075 POTEFA5A3E0 1075 aa30.29■■■□□ 2.44
CPSF6-205ENST00000550075 GJB1P08034 283 aa30.29■■■□□ 2.44
CPSF6-205ENST00000550075 PRKAR2AP13861 404 aaKnown RBP30.29■■■□□ 2.44
CPSF6-205ENST00000550075 RGS19P49795 217 aa30.29■■■□□ 2.44
CPSF6-205ENST00000550075 TMTC2Q8N394 836 aa30.29■■■□□ 2.44
CPSF6-205ENST00000550075 NPLOC4Q8TAT6 608 aa30.29■■■□□ 2.44
CPSF6-205ENST00000550075 AGBL1Q96MI9 1066 aa30.29■■■□□ 2.44
CPSF6-205ENST00000550075 NEK1Q96PY6 1258 aa30.29■■■□□ 2.44
CPSF6-205ENST00000550075 XRN2Q9H0D6 950 aaKnown RBP eCLIP30.29■■■□□ 2.442e-6■■■□□ 15.6
CPSF6-205ENST00000550075 PLXNA1Q9UIW2 1896 aa30.29■■■□□ 2.44
CPSF6-205ENST00000550075 COBLO75128 1261 aa30.28■■■□□ 2.44
CPSF6-205ENST00000550075 ALAS1P13196 640 aa30.28■■■□□ 2.44
CPSF6-205ENST00000550075 SNAP25P60880 206 aa30.28■■■□□ 2.44
CPSF6-205ENST00000550075 MAP3K21Q5TCX8 1036 aa30.28■■■□□ 2.44
CPSF6-205ENST00000550075 ANKRD35Q8N283 1001 aa30.28■■■□□ 2.44
CPSF6-205ENST00000550075 IGDCC4Q8TDY8 1250 aa30.28■■■□□ 2.44
CPSF6-205ENST00000550075 WDR19Q8NEZ3 1342 aa30.27■■■□□ 2.44
CPSF6-205ENST00000550075 DHX16O60231 1041 aaKnown RBP30.27■■■□□ 2.44
CPSF6-205ENST00000550075 CAPN2P17655 700 aa30.27■■■□□ 2.44
CPSF6-205ENST00000550075 TRERF1Q96PN7 1200 aa30.27■■■□□ 2.44
CPSF6-205ENST00000550075 LY9Q9HBG7 655 aa30.27■■■□□ 2.44
CPSF6-205ENST00000550075 DIS3Q9Y2L1 958 aaKnown RBP30.27■■■□□ 2.44
CPSF6-205ENST00000550075 SH2B2O14492 632 aaPredicted RBP30.26■■■□□ 2.43
CPSF6-205ENST00000550075 HMGB1P09429 215 aaKnown RBP30.26■■■□□ 2.43
CPSF6-205ENST00000550075 HSPA4P34932 840 aa30.26■■■□□ 2.43
CPSF6-205ENST00000550075 TRIM32Q13049 653 aa30.26■■■□□ 2.43
CPSF6-205ENST00000550075 NFXL1Q6ZNB6 911 aa30.26■■■□□ 2.43
CPSF6-205ENST00000550075 MAML3Q96JK9 1138 aa30.26■■■□□ 2.43
CPSF6-205ENST00000550075 UBA5Q9GZZ9 404 aa30.26■■■□□ 2.43
CPSF6-205ENST00000550075 PAK6Q9NQU5 681 aaPredicted RBP30.26■■■□□ 2.43
CPSF6-205ENST00000550075 PFASO15067 1338 aa30.25■■■□□ 2.43
CPSF6-205ENST00000550075 CCDC69A6NI79 296 aa30.25■■■□□ 2.43
CPSF6-205ENST00000550075 EIF5BO60841 1220 aaKnown RBP30.25■■■□□ 2.43
CPSF6-205ENST00000550075 DDAH1O94760 285 aa30.25■■■□□ 2.43
CPSF6-205ENST00000550075 PGK2P07205 417 aa30.25■■■□□ 2.43
CPSF6-205ENST00000550075 CACNB2Q08289 660 aaPredicted RBP30.25■■■□□ 2.43
CPSF6-205ENST00000550075 GRM4Q14833 912 aa30.25■■■□□ 2.43
CPSF6-205ENST00000550075 RASEFQ8IZ41 740 aa30.25■■■□□ 2.43
CPSF6-205ENST00000550075 FLRT1Q9NZU1 646 aa30.25■■■□□ 2.43
CPSF6-205ENST00000550075 KLRF2D3W0D1 207 aa30.24■■■□□ 2.43
CPSF6-205ENST00000550075 LIFRP42702 1097 aa30.24■■■□□ 2.43
CPSF6-205ENST00000550075 GJA8P48165 433 aa30.24■■■□□ 2.43
CPSF6-205ENST00000550075 ZNF792Q3KQV3 632 aa30.24■■■□□ 2.43
CPSF6-205ENST00000550075 KCNB2Q92953 911 aa30.24■■■□□ 2.43
CPSF6-205ENST00000550075 SENP2Q9HC62 589 aa30.24■■■□□ 2.43
CPSF6-205ENST00000550075 TROAPQ12815 778 aa30.23■■■□□ 2.43
CPSF6-205ENST00000550075 ADGRF4Q8IZF3 695 aa30.23■■■□□ 2.43
CPSF6-205ENST00000550075 ZNF654Q8IZM8 581 aa30.23■■■□□ 2.43
CPSF6-205ENST00000550075 U2AF1L4Q8WU68 220 aaKnown RBP30.23■■■□□ 2.43
CPSF6-205ENST00000550075 DEFB118Q96PH6 123 aa30.23■■■□□ 2.43
CPSF6-205ENST00000550075 MAD2L2Q9UI95 211 aa30.23■■■□□ 2.43
CPSF6-205ENST00000550075 MYH6P13533 1939 aa30.22■■■□□ 2.43
CPSF6-205ENST00000550075 DNAJC25-GNG10A0A024R161 153 aa30.22■■■□□ 2.43
CPSF6-205ENST00000550075 EN2P19622 333 aaPredicted RBP30.22■■■□□ 2.43
CPSF6-205ENST00000550075 KIF5BP33176 963 aa30.22■■■□□ 2.43
CPSF6-205ENST00000550075 CYP2C19P33261 490 aa30.22■■■□□ 2.43
CPSF6-205ENST00000550075 MLLT1Q03111 559 aaPredicted RBP30.22■■■□□ 2.43
CPSF6-205ENST00000550075 CDC37Q16543 378 aaPredicted RBP30.22■■■□□ 2.43
CPSF6-205ENST00000550075 DHX32Q7L7V1 743 aaKnown RBP30.22■■■□□ 2.43
CPSF6-205ENST00000550075 CTCFLQ8NI51 663 aaPredicted RBP30.22■■■□□ 2.43
CPSF6-205ENST00000550075 MAP3K14Q99558 947 aa30.22■■■□□ 2.43
CPSF6-205ENST00000550075 CPVLQ9H3G5 476 aa30.22■■■□□ 2.43
CPSF6-205ENST00000550075 PALM3A6NDB9 673 aaPredicted RBP30.21■■■□□ 2.43
CPSF6-205ENST00000550075 STAG2Q8N3U4 1231 aa30.21■■■□□ 2.43
CPSF6-205ENST00000550075 MSL3Q8N5Y2 521 aaKnown RBP30.21■■■□□ 2.43
CPSF6-205ENST00000550075 NUP133Q8WUM0 1156 aa30.21■■■□□ 2.43
CPSF6-205ENST00000550075 A1CFQ9NQ94 594 aaKnown RBP30.21■■■□□ 2.43
CPSF6-205ENST00000550075 POTEB2H3BUK9 544 aa30.2■■■□□ 2.43
CPSF6-205ENST00000550075 SGPL1O95470 568 aa30.2■■■□□ 2.43
CPSF6-205ENST00000550075 CALM1P0DP23 149 aa30.2■■■□□ 2.43
CPSF6-205ENST00000550075 CALM2P0DP24 149 aa30.2■■■□□ 2.43
CPSF6-205ENST00000550075 CALM3P0DP25 149 aa30.2■■■□□ 2.43
CPSF6-205ENST00000550075 ADCK5Q3MIX3 580 aa30.2■■■□□ 2.43
CPSF6-205ENST00000550075 TINF2Q9BSI4 451 aa30.2■■■□□ 2.43
CPSF6-205ENST00000550075 GPHNQ9NQX3 736 aaPredicted RBP30.2■■■□□ 2.43
CPSF6-205ENST00000550075 SNX14Q9Y5W7 946 aa30.2■■■□□ 2.43
CPSF6-205ENST00000550075 IGHA2P01877 340 aa30.19■■■□□ 2.42
CPSF6-205ENST00000550075 MUM1L1Q5H9M0 696 aa30.19■■■□□ 2.42
CPSF6-205ENST00000550075 NSMFQ6X4W1 530 aa30.19■■■□□ 2.42
CPSF6-205ENST00000550075 SYNE3Q6ZMZ3 975 aa30.19■■■□□ 2.42
CPSF6-205ENST00000550075 ZNF467Q7Z7K2 595 aaPredicted RBP30.19■■■□□ 2.42
CPSF6-205ENST00000550075 JAKMIP1Q96N16 626 aaKnown RBP30.19■■■□□ 2.42
CPSF6-205ENST00000550075 LRRC2Q9BYS8 371 aa30.19■■■□□ 2.42
CPSF6-205ENST00000550075 JMJD4Q9H9V9 463 aa30.19■■■□□ 2.42
CPSF6-205ENST00000550075 NRBP1Q9UHY1 535 aa30.19■■■□□ 2.42
CPSF6-205ENST00000550075 SLC12A7Q9Y666 1083 aa30.19■■■□□ 2.42
CPSF6-205ENST00000550075 MSCO60682 206 aa30.18■■■□□ 2.42
CPSF6-205ENST00000550075 PSMA5P28066 241 aa30.18■■■□□ 2.42
CPSF6-205ENST00000550075 SGMS1Q86VZ5 419 aa30.18■■■□□ 2.42
CPSF6-205ENST00000550075 SHISA4Q96DD7 197 aa30.18■■■□□ 2.42
CPSF6-205ENST00000550075 VAT1LQ9HCJ6 419 aa30.18■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms