RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 WTAPQ15007 396 aa21.91■■□□□ 1.1
PRPF40B-206ENST00000547764 TMEM67Q5HYA8 995 aa21.91■■□□□ 1.1
PRPF40B-206ENST00000547764 IGDCC4Q8TDY8 1250 aa21.91■■□□□ 1.1
PRPF40B-206ENST00000547764 UBA5Q9GZZ9 404 aa21.91■■□□□ 1.1
PRPF40B-206ENST00000547764 CPVLQ9H3G5 476 aa21.91■■□□□ 1.1
PRPF40B-206ENST00000547764 HMX1Q9NP08 348 aaPredicted RBP21.91■■□□□ 1.1
PRPF40B-206ENST00000547764 PAK6Q9NQU5 681 aaPredicted RBP21.91■■□□□ 1.1
PRPF40B-206ENST00000547764 HOMER2Q9NSB8 354 aa21.91■■□□□ 1.1
PRPF40B-206ENST00000547764 FBXO40Q9UH90 709 aa21.91■■□□□ 1.1
PRPF40B-206ENST00000547764 PRC1O43663 620 aa21.9■■□□□ 1.1
PRPF40B-206ENST00000547764 IGHA2P01877 340 aa21.9■■□□□ 1.1
PRPF40B-206ENST00000547764 PARP1P09874 1014 aaKnown RBP21.9■■□□□ 1.1
PRPF40B-206ENST00000547764 MCM5P33992 734 aa21.9■■□□□ 1.1
PRPF40B-206ENST00000547764 GJA8P48165 433 aa21.9■■□□□ 1.1
PRPF40B-206ENST00000547764 MLLT1Q03111 559 aaPredicted RBP21.9■■□□□ 1.1
PRPF40B-206ENST00000547764 ASPRV1Q53RT3 343 aa21.9■■□□□ 1.1
PRPF40B-206ENST00000547764 MFSD14CQ5VZR4 134 aa21.9■■□□□ 1.1
PRPF40B-206ENST00000547764 OLFML2BQ68BL8 750 aa21.9■■□□□ 1.1
PRPF40B-206ENST00000547764 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.9■■□□□ 1.1
PRPF40B-206ENST00000547764 RASEFQ8IZ41 740 aa21.9■■□□□ 1.1
PRPF40B-206ENST00000547764 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.9■■□□□ 1.1
PRPF40B-206ENST00000547764 ICAM1P05362 532 aa21.89■■□□□ 1.09
PRPF40B-206ENST00000547764 ALAS1P13196 640 aa21.89■■□□□ 1.09
PRPF40B-206ENST00000547764 CYP2C19P33261 490 aa21.89■■□□□ 1.09
PRPF40B-206ENST00000547764 ZNF792Q3KQV3 632 aa21.89■■□□□ 1.09
PRPF40B-206ENST00000547764 TKFCQ3LXA3 575 aa21.89■■□□□ 1.09
PRPF40B-206ENST00000547764 TSGA10IPQ3SY00 556 aa21.89■■□□□ 1.09
PRPF40B-206ENST00000547764 U2AF1L4Q8WU68 220 aaKnown RBP21.89■■□□□ 1.09
PRPF40B-206ENST00000547764 SHISA4Q96DD7 197 aa21.89■■□□□ 1.09
PRPF40B-206ENST00000547764 DDX11Q96FC9 970 aa21.89■■□□□ 1.09
PRPF40B-206ENST00000547764 MAML3Q96JK9 1138 aa21.89■■□□□ 1.09
PRPF40B-206ENST00000547764 DEFB118Q96PH6 123 aa21.89■■□□□ 1.09
PRPF40B-206ENST00000547764 TRERF1Q96PN7 1200 aa21.89■■□□□ 1.09
PRPF40B-206ENST00000547764 ACAD9Q9H845 621 aa21.89■■□□□ 1.09
PRPF40B-206ENST00000547764 GPHNQ9NQX3 736 aaPredicted RBP21.89■■□□□ 1.09
PRPF40B-206ENST00000547764 RNF146Q9NTX7 359 aa21.89■■□□□ 1.09
PRPF40B-206ENST00000547764 CCPG1Q9ULG6 757 aa21.89■■□□□ 1.09
PRPF40B-206ENST00000547764 REC8O95072 547 aa21.88■■□□□ 1.09
PRPF40B-206ENST00000547764 SGPL1O95470 568 aa21.88■■□□□ 1.09
PRPF40B-206ENST00000547764 TAL1P17542 331 aaPredicted RBP21.88■■□□□ 1.09
PRPF40B-206ENST00000547764 ANKRD35Q8N283 1001 aa21.88■■□□□ 1.09
PRPF40B-206ENST00000547764 MTA3Q9BTC8 594 aa21.88■■□□□ 1.09
PRPF40B-206ENST00000547764 LY9Q9HBG7 655 aa21.88■■□□□ 1.09
PRPF40B-206ENST00000547764 DIS3Q9Y2L1 958 aaKnown RBP21.88■■□□□ 1.09
PRPF40B-206ENST00000547764 DNAJC25-GNG10A0A024R161 153 aa21.87■■□□□ 1.09
PRPF40B-206ENST00000547764 CCND3P30281 292 aaPredicted RBP21.87■■□□□ 1.09
PRPF40B-206ENST00000547764 STAG2Q8N3U4 1231 aa21.87■■□□□ 1.09
PRPF40B-206ENST00000547764 SMCHD1A6NHR9 2005 aa21.86■■□□□ 1.09
PRPF40B-206ENST00000547764 HSPA4P34932 840 aa21.86■■□□□ 1.09
PRPF40B-206ENST00000547764 TROAPQ12815 778 aa21.86■■□□□ 1.09
PRPF40B-206ENST00000547764 ADCK5Q3MIX3 580 aa21.86■■□□□ 1.09
PRPF40B-206ENST00000547764 MUM1L1Q5H9M0 696 aa21.86■■□□□ 1.09
PRPF40B-206ENST00000547764 ADGRF4Q8IZF3 695 aa21.86■■□□□ 1.09
PRPF40B-206ENST00000547764 TMEM87BQ96K49 555 aa21.86■■□□□ 1.09
PRPF40B-206ENST00000547764 NEK1Q96PY6 1258 aa21.86■■□□□ 1.09
PRPF40B-206ENST00000547764 MAD2L2Q9UI95 211 aa21.86■■□□□ 1.09
PRPF40B-206ENST00000547764 PALM3A6NDB9 673 aaPredicted RBP21.85■■□□□ 1.09
PRPF40B-206ENST00000547764 KLRF2D3W0D1 207 aa21.85■■□□□ 1.09
PRPF40B-206ENST00000547764 SH2B2O14492 632 aaPredicted RBP21.85■■□□□ 1.09
PRPF40B-206ENST00000547764 GRM4Q14833 912 aa21.85■■□□□ 1.09
PRPF40B-206ENST00000547764 CATIPQ7Z7H3 387 aa21.85■■□□□ 1.09
PRPF40B-206ENST00000547764 TRPV1Q8NER1 839 aa21.85■■□□□ 1.09
PRPF40B-206ENST00000547764 KCNB2Q92953 911 aa21.85■■□□□ 1.09
PRPF40B-206ENST00000547764 LRRC2Q9BYS8 371 aa21.85■■□□□ 1.09
PRPF40B-206ENST00000547764 A1CFQ9NQ94 594 aaKnown RBP21.85■■□□□ 1.09
PRPF40B-206ENST00000547764 WDR19Q8NEZ3 1342 aa21.84■■□□□ 1.09
PRPF40B-206ENST00000547764 TFRCP02786 760 aaKnown RBP21.84■■□□□ 1.09
PRPF40B-206ENST00000547764 KRT32Q14532 448 aa21.84■■□□□ 1.09
PRPF40B-206ENST00000547764 CDC37Q16543 378 aaPredicted RBP21.84■■□□□ 1.09
PRPF40B-206ENST00000547764 TMTC2Q8N394 836 aa21.84■■□□□ 1.09
PRPF40B-206ENST00000547764 TINF2Q9BSI4 451 aa21.84■■□□□ 1.09
PRPF40B-206ENST00000547764 CRISPLD2Q9H0B8 497 aa21.84■■□□□ 1.09
PRPF40B-206ENST00000547764 JMJD4Q9H9V9 463 aa21.84■■□□□ 1.09
PRPF40B-206ENST00000547764 VAT1LQ9HCJ6 419 aa21.84■■□□□ 1.09
PRPF40B-206ENST00000547764 PNMA2Q9UL42 364 aa21.84■■□□□ 1.09
PRPF40B-206ENST00000547764 PLXNA1Q9UIW2 1896 aa21.83■■□□□ 1.09
PRPF40B-206ENST00000547764 DHX16O60231 1041 aaKnown RBP21.83■■□□□ 1.09
PRPF40B-206ENST00000547764 CYBAP13498 195 aa21.83■■□□□ 1.09
PRPF40B-206ENST00000547764 LIFRP42702 1097 aa21.83■■□□□ 1.09
PRPF40B-206ENST00000547764 PRAMEF19Q5SWL8 479 aa21.83■■□□□ 1.09
PRPF40B-206ENST00000547764 NFXL1Q6ZNB6 911 aa21.83■■□□□ 1.09
PRPF40B-206ENST00000547764 ZNF654Q8IZM8 581 aa21.83■■□□□ 1.09
PRPF40B-206ENST00000547764 MKI67P46013 3256 aaKnown RBP21.83■■□□□ 1.08
PRPF40B-206ENST00000547764 CNGA1P29973 690 aa21.82■■□□□ 1.08
PRPF40B-206ENST00000547764 EXOSC10Q01780 885 aaKnown RBP21.82■■□□□ 1.08
PRPF40B-206ENST00000547764 CNTN2Q02246 1040 aa21.82■■□□□ 1.08
PRPF40B-206ENST00000547764 NSMFQ6X4W1 530 aa21.82■■□□□ 1.08
PRPF40B-206ENST00000547764 DHX32Q7L7V1 743 aaKnown RBP21.82■■□□□ 1.08
PRPF40B-206ENST00000547764 NUP133Q8WUM0 1156 aa21.82■■□□□ 1.08
PRPF40B-206ENST00000547764 FGD4Q96M96 766 aa21.82■■□□□ 1.08
PRPF40B-206ENST00000547764 MYL10Q9BUA6 226 aa21.82■■□□□ 1.08
PRPF40B-206ENST00000547764 CYP39A1Q9NYL5 469 aa21.82■■□□□ 1.08
PRPF40B-206ENST00000547764 SNX14Q9Y5W7 946 aa21.82■■□□□ 1.08
PRPF40B-206ENST00000547764 PFASO15067 1338 aa21.81■■□□□ 1.08
PRPF40B-206ENST00000547764 CCDC69A6NI79 296 aa21.81■■□□□ 1.08
PRPF40B-206ENST00000547764 POTEB2H3BUK9 544 aa21.81■■□□□ 1.08
PRPF40B-206ENST00000547764 NFIBO00712 420 aa21.81■■□□□ 1.08
PRPF40B-206ENST00000547764 EPB41L2O43491 1005 aaKnown RBP21.81■■□□□ 1.08
PRPF40B-206ENST00000547764 DDAH1O94760 285 aa21.81■■□□□ 1.08
PRPF40B-206ENST00000547764 CAPN2P17655 700 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms