RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 ADAM21Q9UKJ8 722 aa13.47□□□□□ -0.25
NPC1L1-204ENST00000546276 PCDHB6Q9Y5E3 794 aa13.47□□□□□ -0.25
NPC1L1-204ENST00000546276 LIFRP42702 1097 aa13.47□□□□□ -0.25
NPC1L1-204ENST00000546276 EHHADHQ08426 723 aa13.47□□□□□ -0.25
NPC1L1-204ENST00000546276 TOGARAM2Q6ZUX3 1019 aa13.47□□□□□ -0.25
NPC1L1-204ENST00000546276 LAD1O00515 517 aa13.46□□□□□ -0.25
NPC1L1-204ENST00000546276 RIMBP2O15034 1052 aa13.46□□□□□ -0.25
NPC1L1-204ENST00000546276 BIRC3Q13489 604 aa13.46□□□□□ -0.25
NPC1L1-204ENST00000546276 UAP1Q16222 522 aaPredicted RBP13.46□□□□□ -0.25
NPC1L1-204ENST00000546276 CCDC170Q8IYT3 715 aa13.46□□□□□ -0.25
NPC1L1-204ENST00000546276 PAGE5Q96GU1 130 aa13.46□□□□□ -0.25
NPC1L1-204ENST00000546276 KRT12Q99456 494 aa13.46□□□□□ -0.25
NPC1L1-204ENST00000546276 DPH5Q9H2P9 285 aa13.46□□□□□ -0.25
NPC1L1-204ENST00000546276 H2AFZP0C0S5 128 aa13.46□□□□□ -0.25
NPC1L1-204ENST00000546276 HHATQ5VTY9 493 aa13.46□□□□□ -0.25
NPC1L1-204ENST00000546276 H2AFVQ71UI9 128 aa13.46□□□□□ -0.25
NPC1L1-204ENST00000546276 ATP8A2Q9NTI2 1148 aa13.46□□□□□ -0.25
NPC1L1-204ENST00000546276 PCDHB13Q9Y5F0 798 aa13.46□□□□□ -0.25
NPC1L1-204ENST00000546276 ABCC12Q96J65 1359 aa13.46□□□□□ -0.25
NPC1L1-204ENST00000546276 GYG1P46976 350 aa13.46□□□□□ -0.26
NPC1L1-204ENST00000546276 NEDD9Q14511 834 aa13.46□□□□□ -0.26
NPC1L1-204ENST00000546276 FNBP1Q96RU3 617 aa13.46□□□□□ -0.26
NPC1L1-204ENST00000546276 EYA3Q99504 573 aa13.46□□□□□ -0.26
NPC1L1-204ENST00000546276 SLC8A1P32418 973 aa13.46□□□□□ -0.26
NPC1L1-204ENST00000546276 SLC1A4P43007 532 aa13.46□□□□□ -0.26
NPC1L1-204ENST00000546276 SMTNP53814 917 aa13.46□□□□□ -0.26
NPC1L1-204ENST00000546276 C2orf54Q08AI8 447 aa13.46□□□□□ -0.26
NPC1L1-204ENST00000546276 FAM26FQ5R3K3 315 aa13.46□□□□□ -0.26
NPC1L1-204ENST00000546276 WDR78Q5VTH9 848 aa13.46□□□□□ -0.26
NPC1L1-204ENST00000546276 ARHGEF25Q86VW2 580 aa13.46□□□□□ -0.26
NPC1L1-204ENST00000546276 MRRFQ96E11 262 aaKnown RBP13.46□□□□□ -0.26
NPC1L1-204ENST00000546276 UIMC1Q96RL1 719 aa13.46□□□□□ -0.26
NPC1L1-204ENST00000546276 PANK4Q9NVE7 773 aa13.46□□□□□ -0.26
NPC1L1-204ENST00000546276 GLI2P10070 1586 aa13.45□□□□□ -0.26
NPC1L1-204ENST00000546276 KLRF2D3W0D1 207 aa13.45□□□□□ -0.26
NPC1L1-204ENST00000546276 HEXIM1O94992 359 aaKnown RBP13.45□□□□□ -0.26
NPC1L1-204ENST00000546276 GAS8O95995 478 aa13.45□□□□□ -0.26
NPC1L1-204ENST00000546276 ABCB4P21439 1286 aa13.45□□□□□ -0.26
NPC1L1-204ENST00000546276 ZBED6P86452 979 aa13.45□□□□□ -0.26
NPC1L1-204ENST00000546276 ARHGAP44Q17R89 818 aa13.45□□□□□ -0.26
NPC1L1-204ENST00000546276 PI16Q6UXB8 463 aa13.45□□□□□ -0.26
NPC1L1-204ENST00000546276 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.45□□□□□ -0.26
NPC1L1-204ENST00000546276 MAIP1Q8WWC4 291 aa13.45□□□□□ -0.26
NPC1L1-204ENST00000546276 PKD2L1Q9P0L9 805 aa13.45□□□□□ -0.26
NPC1L1-204ENST00000546276 JRKLQ9Y4A0 524 aa13.45□□□□□ -0.26
NPC1L1-204ENST00000546276 MAP3K15Q6ZN16 1313 aa13.45□□□□□ -0.26
NPC1L1-204ENST00000546276 TMEM232C9JQI7 657 aa13.45□□□□□ -0.26
NPC1L1-204ENST00000546276 SEMA3EO15041 775 aa13.45□□□□□ -0.26
NPC1L1-204ENST00000546276 MYL1P05976 194 aa13.45□□□□□ -0.26
NPC1L1-204ENST00000546276 ZNF131P52739 623 aa13.45□□□□□ -0.26
NPC1L1-204ENST00000546276 MGARPQ8TDB4 240 aa13.45□□□□□ -0.26
NPC1L1-204ENST00000546276 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.45□□□□□ -0.26
NPC1L1-204ENST00000546276 FEZ2Q9UHY8 353 aaPredicted RBP13.45□□□□□ -0.26
NPC1L1-204ENST00000546276 EXOC7Q9UPT5 735 aa13.45□□□□□ -0.26
NPC1L1-204ENST00000546276 SPHKAPQ2M3C7 1700 aa13.45□□□□□ -0.26
NPC1L1-204ENST00000546276 STX2P32856 288 aa13.45□□□□□ -0.26
NPC1L1-204ENST00000546276 ANKRD42Q8N9B4 389 aa13.45□□□□□ -0.26
NPC1L1-204ENST00000546276 MCUR1Q96AQ8 359 aa13.45□□□□□ -0.26
NPC1L1-204ENST00000546276 ZSWIM5Q9P217 1185 aa13.45□□□□□ -0.26
NPC1L1-204ENST00000546276 RFX7Q2KHR2 1363 aa13.45□□□□□ -0.26
NPC1L1-204ENST00000546276 GYS2P54840 703 aa13.45□□□□□ -0.26
NPC1L1-204ENST00000546276 KRT31Q15323 416 aa13.45□□□□□ -0.26
NPC1L1-204ENST00000546276 PTPROQ16827 1216 aa13.45□□□□□ -0.26
NPC1L1-204ENST00000546276 EPB41L5Q9HCM4 733 aa13.45□□□□□ -0.26
NPC1L1-204ENST00000546276 GJB4Q9NTQ9 266 aa13.45□□□□□ -0.26
NPC1L1-204ENST00000546276 RNF14Q9UBS8 474 aa13.45□□□□□ -0.26
NPC1L1-204ENST00000546276 RIPOR2Q9Y4F9 1068 aa13.45□□□□□ -0.26
NPC1L1-204ENST00000546276 CCDC169A6NNP5 214 aa13.44□□□□□ -0.26
NPC1L1-204ENST00000546276 MYO1CO00159 1063 aa13.44□□□□□ -0.26
NPC1L1-204ENST00000546276 ARHGEF2Q92974 986 aaKnown RBP13.44□□□□□ -0.26
NPC1L1-204ENST00000546276 AK8Q96MA6 479 aa13.44□□□□□ -0.26
NPC1L1-204ENST00000546276 THAP9Q9H5L6 903 aa13.44□□□□□ -0.26
NPC1L1-204ENST00000546276 CPSF2Q9P2I0 782 aaKnown RBP13.44□□□□□ -0.26
NPC1L1-204ENST00000546276 TXNDC16Q9P2K2 825 aa13.44□□□□□ -0.26
NPC1L1-204ENST00000546276 PCDHA12Q9UN75 941 aa13.44□□□□□ -0.26
NPC1L1-204ENST00000546276 AGTPBP1Q9UPW5 1226 aa13.44□□□□□ -0.26
NPC1L1-204ENST00000546276 ABCC3O15438 1527 aa13.44□□□□□ -0.26
NPC1L1-204ENST00000546276 KRT15P19012 456 aa13.44□□□□□ -0.26
NPC1L1-204ENST00000546276 PTPREP23469 700 aa13.44□□□□□ -0.26
NPC1L1-204ENST00000546276 IFT88Q13099 833 aa13.44□□□□□ -0.26
NPC1L1-204ENST00000546276 SNCBQ16143 134 aa13.44□□□□□ -0.26
NPC1L1-204ENST00000546276 CNBD1Q8NA66 436 aa13.44□□□□□ -0.26
NPC1L1-204ENST00000546276 FAM212AQ96EL1 285 aa13.44□□□□□ -0.26
NPC1L1-204ENST00000546276 EPSTI1Q96J88 318 aa13.44□□□□□ -0.26
NPC1L1-204ENST00000546276 PCDHA4Q9UN74 947 aa13.44□□□□□ -0.26
NPC1L1-204ENST00000546276 GNPATO15228 680 aa13.44□□□□□ -0.26
NPC1L1-204ENST00000546276 ADAM9Q13443 819 aa13.44□□□□□ -0.26
NPC1L1-204ENST00000546276 MAN2A1Q16706 1144 aa13.44□□□□□ -0.26
NPC1L1-204ENST00000546276 ANKRD7Q92527 254 aa13.44□□□□□ -0.26
NPC1L1-204ENST00000546276 NHEJ1Q9H9Q4 299 aaPredicted RBP13.44□□□□□ -0.26
NPC1L1-204ENST00000546276 EFCC1Q9HA90 598 aa13.44□□□□□ -0.26
NPC1L1-204ENST00000546276 TSGA10IPQ3SY00 556 aa13.43□□□□□ -0.26
NPC1L1-204ENST00000546276 OGFOD1Q8N543 542 aa13.43□□□□□ -0.26
NPC1L1-204ENST00000546276 RBM17Q96I25 401 aaKnown RBP13.43□□□□□ -0.26
NPC1L1-204ENST00000546276 KLHL14Q9P2G3 628 aa13.43□□□□□ -0.26
NPC1L1-204ENST00000546276 GGA1Q9UJY5 639 aa13.43□□□□□ -0.26
NPC1L1-204ENST00000546276 TCP11X2Q5H9J9 407 aa13.43□□□□□ -0.26
NPC1L1-204ENST00000546276 ALS2CLQ60I27 953 aa13.43□□□□□ -0.26
NPC1L1-204ENST00000546276 CDCA7Q9BWT1 371 aaPredicted RBP13.43□□□□□ -0.26
NPC1L1-204ENST00000546276 PPP1R12CQ9BZL4 782 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms