RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 GPHNQ9NQX3 736 aaPredicted RBP21.44■■□□□ 1.02
SNRPA1-203ENST00000540017 HOMER2Q9NSB8 354 aa21.44■■□□□ 1.02
SNRPA1-203ENST00000540017 CYP2C19P33261 490 aa21.43■■□□□ 1.02
SNRPA1-203ENST00000540017 GJA8P48165 433 aa21.43■■□□□ 1.02
SNRPA1-203ENST00000540017 MLLT1Q03111 559 aaPredicted RBP21.43■■□□□ 1.02
SNRPA1-203ENST00000540017 KCTD2Q14681 263 aa21.43■■□□□ 1.02
SNRPA1-203ENST00000540017 DEFB118Q96PH6 123 aa21.43■■□□□ 1.02
SNRPA1-203ENST00000540017 UBA5Q9GZZ9 404 aa21.43■■□□□ 1.02
SNRPA1-203ENST00000540017 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.43■■□□□ 1.02
SNRPA1-203ENST00000540017 RPTORQ8N122 1335 aa21.43■■□□□ 1.02
SNRPA1-203ENST00000540017 SMCHD1A6NHR9 2005 aa21.42■■□□□ 1.02
SNRPA1-203ENST00000540017 ZNF792Q3KQV3 632 aa21.42■■□□□ 1.02
SNRPA1-203ENST00000540017 GPATCH4Q5T3I0 446 aaKnown RBP21.42■■□□□ 1.02
SNRPA1-203ENST00000540017 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.42■■□□□ 1.02
SNRPA1-203ENST00000540017 RASEFQ8IZ41 740 aa21.42■■□□□ 1.02
SNRPA1-203ENST00000540017 U2AF1L4Q8WU68 220 aaKnown RBP21.42■■□□□ 1.02
SNRPA1-203ENST00000540017 MAML3Q96JK9 1138 aa21.42■■□□□ 1.02
SNRPA1-203ENST00000540017 HMX1Q9NP08 348 aaPredicted RBP21.42■■□□□ 1.02
SNRPA1-203ENST00000540017 DNAJC25-GNG10A0A024R161 153 aa21.41■■□□□ 1.02
SNRPA1-203ENST00000540017 SGPL1O95470 568 aa21.41■■□□□ 1.02
SNRPA1-203ENST00000540017 ALAS1P13196 640 aa21.41■■□□□ 1.02
SNRPA1-203ENST00000540017 CCND3P30281 292 aaPredicted RBP21.41■■□□□ 1.02
SNRPA1-203ENST00000540017 MUM1L1Q5H9M0 696 aa21.41■■□□□ 1.02
SNRPA1-203ENST00000540017 MFSD14CQ5VZR4 134 aa21.41■■□□□ 1.02
SNRPA1-203ENST00000540017 OLFML2BQ68BL8 750 aa21.41■■□□□ 1.02
SNRPA1-203ENST00000540017 STAG2Q8N3U4 1231 aa21.41■■□□□ 1.02
SNRPA1-203ENST00000540017 CHST13Q8NET6 341 aa21.41■■□□□ 1.02
SNRPA1-203ENST00000540017 RNF146Q9NTX7 359 aa21.41■■□□□ 1.02
SNRPA1-203ENST00000540017 PRC1O43663 620 aa21.4■■□□□ 1.02
SNRPA1-203ENST00000540017 ICAM1P05362 532 aa21.4■■□□□ 1.02
SNRPA1-203ENST00000540017 WTAPQ15007 396 aa21.4■■□□□ 1.02
SNRPA1-203ENST00000540017 TMEM67Q5HYA8 995 aa21.4■■□□□ 1.02
SNRPA1-203ENST00000540017 TRPV1Q8NER1 839 aa21.4■■□□□ 1.02
SNRPA1-203ENST00000540017 TRERF1Q96PN7 1200 aa21.4■■□□□ 1.02
SNRPA1-203ENST00000540017 FBXO40Q9UH90 709 aa21.4■■□□□ 1.02
SNRPA1-203ENST00000540017 CCPG1Q9ULG6 757 aa21.4■■□□□ 1.02
SNRPA1-203ENST00000540017 PLXNA1Q9UIW2 1896 aa21.39■■□□□ 1.02
SNRPA1-203ENST00000540017 ERICH2A1L162 156 aa21.39■■□□□ 1.01
SNRPA1-203ENST00000540017 PARP1P09874 1014 aaKnown RBP21.39■■□□□ 1.01
SNRPA1-203ENST00000540017 ADCK5Q3MIX3 580 aa21.39■■□□□ 1.01
SNRPA1-203ENST00000540017 ASPRV1Q53RT3 343 aa21.39■■□□□ 1.01
SNRPA1-203ENST00000540017 DDX11Q96FC9 970 aa21.39■■□□□ 1.01
SNRPA1-203ENST00000540017 CRISPLD2Q9H0B8 497 aa21.39■■□□□ 1.01
SNRPA1-203ENST00000540017 ACAD9Q9H845 621 aa21.39■■□□□ 1.01
SNRPA1-203ENST00000540017 LY9Q9HBG7 655 aa21.39■■□□□ 1.01
SNRPA1-203ENST00000540017 SLC5A4Q9NY91 659 aa21.39■■□□□ 1.01
SNRPA1-203ENST00000540017 MAD2L2Q9UI95 211 aa21.39■■□□□ 1.01
SNRPA1-203ENST00000540017 MCM5P33992 734 aa21.38■■□□□ 1.01
SNRPA1-203ENST00000540017 SART3Q15020 963 aaKnown RBP21.38■■□□□ 1.01
SNRPA1-203ENST00000540017 TKFCQ3LXA3 575 aa21.38■■□□□ 1.01
SNRPA1-203ENST00000540017 TSGA10IPQ3SY00 556 aa21.38■■□□□ 1.01
SNRPA1-203ENST00000540017 PRAMEF19Q5SWL8 479 aa21.38■■□□□ 1.01
SNRPA1-203ENST00000540017 RNF20Q5VTR2 975 aa21.38■■□□□ 1.01
SNRPA1-203ENST00000540017 ADGRF4Q8IZF3 695 aa21.38■■□□□ 1.01
SNRPA1-203ENST00000540017 ANKRD35Q8N283 1001 aa21.38■■□□□ 1.01
SNRPA1-203ENST00000540017 FGD4Q96M96 766 aa21.38■■□□□ 1.01
SNRPA1-203ENST00000540017 A1CFQ9NQ94 594 aaKnown RBP21.38■■□□□ 1.01
SNRPA1-203ENST00000540017 DIS3Q9Y2L1 958 aaKnown RBP21.38■■□□□ 1.01
SNRPA1-203ENST00000540017 SH2B2O14492 632 aaPredicted RBP21.37■■□□□ 1.01
SNRPA1-203ENST00000540017 CYBAP13498 195 aa21.37■■□□□ 1.01
SNRPA1-203ENST00000540017 TROAPQ12815 778 aa21.37■■□□□ 1.01
SNRPA1-203ENST00000540017 SLC35G1Q2M3R5 365 aa21.37■■□□□ 1.01
SNRPA1-203ENST00000540017 KCNB2Q92953 911 aa21.37■■□□□ 1.01
SNRPA1-203ENST00000540017 LRRC2Q9BYS8 371 aa21.37■■□□□ 1.01
SNRPA1-203ENST00000540017 PALM3A6NDB9 673 aaPredicted RBP21.36■■□□□ 1.01
SNRPA1-203ENST00000540017 KLRF2D3W0D1 207 aa21.36■■□□□ 1.01
SNRPA1-203ENST00000540017 TFRCP02786 760 aaKnown RBP21.36■■□□□ 1.01
SNRPA1-203ENST00000540017 CNTN2Q02246 1040 aa21.36■■□□□ 1.01
SNRPA1-203ENST00000540017 GRM4Q14833 912 aa21.36■■□□□ 1.01
SNRPA1-203ENST00000540017 LHX8Q68G74 356 aa21.36■■□□□ 1.01
SNRPA1-203ENST00000540017 UBE2Q1Q7Z7E8 422 aa21.36■■□□□ 1.01
SNRPA1-203ENST00000540017 NEK1Q96PY6 1258 aa21.36■■□□□ 1.01
SNRPA1-203ENST00000540017 MTA3Q9BTC8 594 aa21.36■■□□□ 1.01
SNRPA1-203ENST00000540017 JMJD4Q9H9V9 463 aa21.36■■□□□ 1.01
SNRPA1-203ENST00000540017 NFIBO00712 420 aa21.35■■□□□ 1.01
SNRPA1-203ENST00000540017 HSPA4P34932 840 aa21.35■■□□□ 1.01
SNRPA1-203ENST00000540017 CDC37Q16543 378 aaPredicted RBP21.35■■□□□ 1.01
SNRPA1-203ENST00000540017 CLEC4DQ8WXI8 215 aa21.35■■□□□ 1.01
SNRPA1-203ENST00000540017 TMEM87BQ96K49 555 aa21.35■■□□□ 1.01
SNRPA1-203ENST00000540017 TCEANC2Q96MN5 208 aa21.35■■□□□ 1.01
SNRPA1-203ENST00000540017 TINF2Q9BSI4 451 aa21.35■■□□□ 1.01
SNRPA1-203ENST00000540017 MYL10Q9BUA6 226 aa21.35■■□□□ 1.01
SNRPA1-203ENST00000540017 VAT1LQ9HCJ6 419 aa21.35■■□□□ 1.01
SNRPA1-203ENST00000540017 WDR19Q8NEZ3 1342 aa21.34■■□□□ 1.01
SNRPA1-203ENST00000540017 REC8O95072 547 aa21.34■■□□□ 1.01
SNRPA1-203ENST00000540017 CNGA1P29973 690 aa21.34■■□□□ 1.01
SNRPA1-203ENST00000540017 EXOSC10Q01780 885 aaKnown RBP21.34■■□□□ 1.01
SNRPA1-203ENST00000540017 ZNF654Q8IZM8 581 aa21.34■■□□□ 1.01
SNRPA1-203ENST00000540017 FAM133AQ8N9E0 248 aa21.34■■□□□ 1.01
SNRPA1-203ENST00000540017 PURBQ96QR8 312 aaKnown RBP21.34■■□□□ 1.01
SNRPA1-203ENST00000540017 CYP39A1Q9NYL5 469 aa21.34■■□□□ 1.01
SNRPA1-203ENST00000540017 SNX14Q9Y5W7 946 aa21.34■■□□□ 1.01
SNRPA1-203ENST00000540017 SOWAHBA6NEL2 793 aa21.33■■□□□ 1.01
SNRPA1-203ENST00000540017 MNX1P50219 401 aaPredicted RBP21.33■■□□□ 1.01
SNRPA1-203ENST00000540017 QRICH1Q2TAL8 776 aa21.33■■□□□ 1.01
SNRPA1-203ENST00000540017 USH1GQ495M9 461 aa21.33■■□□□ 1.01
SNRPA1-203ENST00000540017 NSMFQ6X4W1 530 aa21.33■■□□□ 1.01
SNRPA1-203ENST00000540017 CATIPQ7Z7H3 387 aa21.33■■□□□ 1.01
SNRPA1-203ENST00000540017 OGDHLQ9ULD0 1010 aa21.33■■□□□ 1.01
SNRPA1-203ENST00000540017 ASTN1O14525 1302 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms