RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 CTAGE9A4FU28 777 aa15.66■□□□□ 0.1
LIG1-203ENST00000536218 CHUKO15111 745 aa15.66■□□□□ 0.1
LIG1-203ENST00000536218 DEXIO95424 95 aa15.66■□□□□ 0.1
LIG1-203ENST00000536218 PDE6BP35913 854 aa15.66■□□□□ 0.1
LIG1-203ENST00000536218 GNGT1P63211 74 aa15.66■□□□□ 0.1
LIG1-203ENST00000536218 STIM1Q13586 685 aa15.66■□□□□ 0.1
LIG1-203ENST00000536218 NBPF20Q3BBV1 942 aa15.66■□□□□ 0.1
LIG1-203ENST00000536218 NOSTRINQ8IVI9 506 aa15.66■□□□□ 0.1
LIG1-203ENST00000536218 TGFBRAP1Q8WUH2 860 aa15.66■□□□□ 0.1
LIG1-203ENST00000536218 MCM8Q9UJA3 840 aa15.66■□□□□ 0.1
LIG1-203ENST00000536218 LEMD3Q9Y2U8 911 aa15.66■□□□□ 0.1
LIG1-203ENST00000536218 C21orf2O43822 256 aa15.65■□□□□ 0.1
LIG1-203ENST00000536218 PRPF6O94906 941 aaKnown RBP15.65■□□□□ 0.1
LIG1-203ENST00000536218 MMP1P03956 469 aa15.65■□□□□ 0.1
LIG1-203ENST00000536218 SPTY2D1Q68D10 685 aaPredicted RBP15.65■□□□□ 0.1
LIG1-203ENST00000536218 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.65■□□□□ 0.1
LIG1-203ENST00000536218 ZNF804AQ7Z570 1209 aa15.65■□□□□ 0.1
LIG1-203ENST00000536218 MSL3Q8N5Y2 521 aaKnown RBP15.65■□□□□ 0.1
LIG1-203ENST00000536218 HINFPQ9BQA5 517 aa15.65■□□□□ 0.1
LIG1-203ENST00000536218 HSD3B7Q9H2F3 369 aa15.65■□□□□ 0.1
LIG1-203ENST00000536218 RBM28Q9NW13 759 aaKnown RBP15.65■□□□□ 0.1
LIG1-203ENST00000536218 MROH7-TTC4A0A0A0MT08 1334 aa15.65■□□□□ 0.1
LIG1-203ENST00000536218 CLNS1AP54105 237 aaKnown RBP15.65■□□□□ 0.1
LIG1-203ENST00000536218 RNF187Q5TA31 235 aaPredicted RBP15.65■□□□□ 0.1
LIG1-203ENST00000536218 TEX11Q8IYF3 940 aa15.65■□□□□ 0.1
LIG1-203ENST00000536218 TRIM6Q9C030 488 aaPredicted RBP15.65■□□□□ 0.1
LIG1-203ENST00000536218 CABP5Q9NP86 173 aa15.65■□□□□ 0.1
LIG1-203ENST00000536218 RIMBP2O15034 1052 aa15.65■□□□□ 0.1
LIG1-203ENST00000536218 SKAP2O75563 359 aaPredicted RBP15.65■□□□□ 0.1
LIG1-203ENST00000536218 GCFC2P16383 781 aaKnown RBP15.65■□□□□ 0.1
LIG1-203ENST00000536218 SEMA3FQ13275 785 aa15.65■□□□□ 0.1
LIG1-203ENST00000536218 MAPKAPK5Q8IW41 473 aa15.65■□□□□ 0.1
LIG1-203ENST00000536218 WDR66Q8TBY9 1149 aa15.65■□□□□ 0.1
LIG1-203ENST00000536218 CAPS2Q9BXY5 557 aa15.65■□□□□ 0.1
LIG1-203ENST00000536218 ATP8A2Q9NTI2 1148 aa15.65■□□□□ 0.1
LIG1-203ENST00000536218 MYH2Q9UKX2 1941 aa15.64■□□□□ 0.09
LIG1-203ENST00000536218 CACNA1SQ13698 1873 aa15.64■□□□□ 0.09
LIG1-203ENST00000536218 SCN7AQ01118 1682 aa15.64■□□□□ 0.09
LIG1-203ENST00000536218 SYKP43405 635 aa15.64■□□□□ 0.09
LIG1-203ENST00000536218 DDR1Q08345 913 aa15.64■□□□□ 0.09
LIG1-203ENST00000536218 NCAPH2Q6IBW4 605 aa15.64■□□□□ 0.09
LIG1-203ENST00000536218 GSPT2Q8IYD1 628 aaKnown RBP15.64■□□□□ 0.09
LIG1-203ENST00000536218 JMYQ8N9B5 988 aa15.64■□□□□ 0.09
LIG1-203ENST00000536218 TC2NQ8N9U0 490 aa15.64■□□□□ 0.09
LIG1-203ENST00000536218 TBC1D22AQ8WUA7 517 aa15.64■□□□□ 0.09
LIG1-203ENST00000536218 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.64■□□□□ 0.09
LIG1-203ENST00000536218 FAM205CA6NFA0 338 aa15.64■□□□□ 0.09
LIG1-203ENST00000536218 NDUFAB1O14561 156 aa15.64■□□□□ 0.09
LIG1-203ENST00000536218 IKBKBO14920 756 aa15.64■□□□□ 0.09
LIG1-203ENST00000536218 SSBP05455 408 aaKnown RBP eCLIP15.64■□□□□ 0.09
LIG1-203ENST00000536218 CMA1P23946 247 aa15.64■□□□□ 0.09
LIG1-203ENST00000536218 PTPAQ15257 358 aa15.64■□□□□ 0.09
LIG1-203ENST00000536218 SHC4Q6S5L8 630 aa15.64■□□□□ 0.09
LIG1-203ENST00000536218 FMNL3Q8IVF7 1028 aa15.64■□□□□ 0.09
LIG1-203ENST00000536218 SLC35F6Q8N357 371 aa15.64■□□□□ 0.09
LIG1-203ENST00000536218 SLC44A5Q8NCS7 719 aa15.64■□□□□ 0.09
LIG1-203ENST00000536218 GGA1Q9UJY5 639 aa15.64■□□□□ 0.09
LIG1-203ENST00000536218 PDE4BQ07343 736 aa15.63■□□□□ 0.09
LIG1-203ENST00000536218 CCDC148Q8NFR7 591 aa15.63■□□□□ 0.09
LIG1-203ENST00000536218 MAP3K14Q99558 947 aa15.63■□□□□ 0.09
LIG1-203ENST00000536218 MKNK2Q9HBH9 465 aa15.63■□□□□ 0.09
LIG1-203ENST00000536218 HPCAL4Q9UM19 191 aa15.63■□□□□ 0.09
LIG1-203ENST00000536218 STK36Q9NRP7 1315 aa15.63■□□□□ 0.09
LIG1-203ENST00000536218 C4AP0C0L4 1744 aa15.63■□□□□ 0.09
LIG1-203ENST00000536218 C4BP0C0L5 1744 aa15.63■□□□□ 0.09
LIG1-203ENST00000536218 ADRA2BP18089 450 aa15.63■□□□□ 0.09
LIG1-203ENST00000536218 TOB1P50616 345 aaPredicted RBP15.63■□□□□ 0.09
LIG1-203ENST00000536218 TFAP4Q01664 338 aa15.63■□□□□ 0.09
LIG1-203ENST00000536218 GRIN1Q05586 938 aa15.63■□□□□ 0.09
LIG1-203ENST00000536218 NAA25Q14CX7 972 aa15.63■□□□□ 0.09
LIG1-203ENST00000536218 TXNRD1Q16881 649 aa15.63■□□□□ 0.09
LIG1-203ENST00000536218 OLFM4Q6UX06 510 aa15.63■□□□□ 0.09
LIG1-203ENST00000536218 RBM17Q96I25 401 aaKnown RBP15.63■□□□□ 0.09
LIG1-203ENST00000536218 CD209Q9NNX6 404 aa15.63■□□□□ 0.09
LIG1-203ENST00000536218 PCDHB6Q9Y5E3 794 aa15.63■□□□□ 0.09
LIG1-203ENST00000536218 MYH13Q9UKX3 1938 aa15.63■□□□□ 0.09
LIG1-203ENST00000536218 TROAPQ12815 778 aa15.63■□□□□ 0.09
LIG1-203ENST00000536218 PROM2Q8N271 834 aa15.63■□□□□ 0.09
LIG1-203ENST00000536218 INTS13Q9NVM9 706 aa15.63■□□□□ 0.09
LIG1-203ENST00000536218 THSD7AQ9UPZ6 1657 aa15.62■□□□□ 0.09
LIG1-203ENST00000536218 F8W031 263 aaPredicted RBP15.62■□□□□ 0.09
LIG1-203ENST00000536218 NHSQ6T4R5 1651 aa15.62■□□□□ 0.09
LIG1-203ENST00000536218 CHD4Q14839 1912 aa15.62■□□□□ 0.09
LIG1-203ENST00000536218 CEP85LQ5SZL2 805 aa15.62■□□□□ 0.09
LIG1-203ENST00000536218 SPECC1LQ69YQ0 1117 aa15.62■□□□□ 0.09
LIG1-203ENST00000536218 SHISA4Q96DD7 197 aa15.62■□□□□ 0.09
LIG1-203ENST00000536218 A1CFQ9NQ94 594 aaKnown RBP15.62■□□□□ 0.09
LIG1-203ENST00000536218 ARPP21Q9UBL0 812 aaPredicted RBP15.62■□□□□ 0.09
LIG1-203ENST00000536218 POLLQ9UGP5 575 aa15.62■□□□□ 0.09
LIG1-203ENST00000536218 IRS2Q9Y4H2 1338 aa15.62■□□□□ 0.09
LIG1-203ENST00000536218 VEGFAP15692 232 aaPredicted RBP15.61■□□□□ 0.09
LIG1-203ENST00000536218 TACO1Q9BSH4 297 aaKnown RBP15.61■□□□□ 0.09
LIG1-203ENST00000536218 POLD4Q9HCU8 107 aa15.61■□□□□ 0.09
LIG1-203ENST00000536218 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.61■□□□□ 0.09
LIG1-203ENST00000536218 TNRC6CQ9HCJ0 1690 aaKnown RBP15.61■□□□□ 0.09
LIG1-203ENST00000536218 USP17L3A6NCW0 530 aa15.61■□□□□ 0.09
LIG1-203ENST00000536218 USP17L4A6NCW7 530 aa15.61■□□□□ 0.09
LIG1-203ENST00000536218 KIF3CO14782 793 aa15.61■□□□□ 0.09
LIG1-203ENST00000536218 BAG3O95817 575 aa15.61■□□□□ 0.09
LIG1-203ENST00000536218 CDR1P51861 262 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms