RNA–Protein interactions for RNA: ENST00000531238.1

RELA-216, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 4

Gene RELA, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-216ENST00000531238 GPHNQ9NQX3 736 aaPredicted RBP19.05■□□□□ 0.64
RELA-216ENST00000531238 RASEFQ8IZ41 740 aa19.04■□□□□ 0.64
RELA-216ENST00000531238 U2AF1L4Q8WU68 220 aaKnown RBP19.04■□□□□ 0.64
RELA-216ENST00000531238 MAML3Q96JK9 1138 aa19.04■□□□□ 0.64
RELA-216ENST00000531238 UBAC1Q9BSL1 405 aa19.04■□□□□ 0.64
RELA-216ENST00000531238 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.04■□□□□ 0.641e-14■■■■■ 30.6
RELA-216ENST00000531238 HMX1Q9NP08 348 aaPredicted RBP19.04■□□□□ 0.64
RELA-216ENST00000531238 CTDP1Q9Y5B0 961 aaPredicted RBP19.04■□□□□ 0.64
RELA-216ENST00000531238 DNAJC25-GNG10A0A024R161 153 aa19.03■□□□□ 0.64
RELA-216ENST00000531238 IFIT3O14879 490 aaKnown RBP19.03■□□□□ 0.64
RELA-216ENST00000531238 PRAMEF19Q5SWL8 479 aa19.03■□□□□ 0.64
RELA-216ENST00000531238 IFIT1BQ5T764 474 aaKnown RBP19.03■□□□□ 0.64
RELA-216ENST00000531238 OLFML2BQ68BL8 750 aa19.03■□□□□ 0.64
RELA-216ENST00000531238 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.03■□□□□ 0.64
RELA-216ENST00000531238 STAG2Q8N3U4 1231 aa19.03■□□□□ 0.64
RELA-216ENST00000531238 CRISPLD2Q9H0B8 497 aa19.03■□□□□ 0.64
RELA-216ENST00000531238 HOMER2Q9NSB8 354 aa19.03■□□□□ 0.64
RELA-216ENST00000531238 COPB2P35606 906 aa19.02■□□□□ 0.64
RELA-216ENST00000531238 KCTD2Q14681 263 aa19.02■□□□□ 0.64
RELA-216ENST00000531238 MUM1L1Q5H9M0 696 aa19.02■□□□□ 0.64
RELA-216ENST00000531238 LHX8Q68G74 356 aa19.02■□□□□ 0.64
RELA-216ENST00000531238 RALYLQ86SE5 291 aaKnown RBP19.02■□□□□ 0.64
RELA-216ENST00000531238 CHST13Q8NET6 341 aa19.02■□□□□ 0.64
RELA-216ENST00000531238 ZNFX1Q9P2E3 1918 aaKnown RBP19.02■□□□□ 0.63
RELA-216ENST00000531238 RBBP6Q7Z6E9 1792 aaKnown RBP19.01■□□□□ 0.63
RELA-216ENST00000531238 ALAS1P13196 640 aa19.01■□□□□ 0.63
RELA-216ENST00000531238 MFSD14CQ5VZR4 134 aa19.01■□□□□ 0.63
RELA-216ENST00000531238 CASC1Q6TDU7 716 aa19.01■□□□□ 0.63
RELA-216ENST00000531238 UBE2Q1Q7Z7E8 422 aa19.01■□□□□ 0.63
RELA-216ENST00000531238 FGD4Q96M96 766 aa19.01■□□□□ 0.63
RELA-216ENST00000531238 TRERF1Q96PN7 1200 aa19.01■□□□□ 0.63
RELA-216ENST00000531238 MAD2L2Q9UI95 211 aa19.01■□□□□ 0.63
RELA-216ENST00000531238 SMCHD1A6NHR9 2005 aa19.01■□□□□ 0.63
RELA-216ENST00000531238 ZNF236Q9UL36 1845 aa19■□□□□ 0.63
RELA-216ENST00000531238 TFRCP02786 760 aaKnown RBP19■□□□□ 0.63
RELA-216ENST00000531238 ICAM1P05362 532 aa19■□□□□ 0.63
RELA-216ENST00000531238 MNX1P50219 401 aaPredicted RBP19■□□□□ 0.63
RELA-216ENST00000531238 SLC35G1Q2M3R5 365 aa19■□□□□ 0.63
RELA-216ENST00000531238 ADCK5Q3MIX3 580 aa19■□□□□ 0.63
RELA-216ENST00000531238 GPATCH4Q5T3I0 446 aaKnown RBP19■□□□□ 0.63
RELA-216ENST00000531238 ADGRF4Q8IZF3 695 aa19■□□□□ 0.63
RELA-216ENST00000531238 LY9Q9HBG7 655 aa19■□□□□ 0.63
RELA-216ENST00000531238 RNF146Q9NTX7 359 aa19■□□□□ 0.63
RELA-216ENST00000531238 DIS3Q9Y2L1 958 aaKnown RBP19■□□□□ 0.63
RELA-216ENST00000531238 PALM3A6NDB9 673 aaPredicted RBP18.99■□□□□ 0.63
RELA-216ENST00000531238 PRC1O43663 620 aa18.99■□□□□ 0.63
RELA-216ENST00000531238 CNTN2Q02246 1040 aa18.99■□□□□ 0.63
RELA-216ENST00000531238 TROAPQ12815 778 aa18.99■□□□□ 0.63
RELA-216ENST00000531238 WTAPQ15007 396 aa18.99■□□□□ 0.63
RELA-216ENST00000531238 TSGA10IPQ3SY00 556 aa18.99■□□□□ 0.63
RELA-216ENST00000531238 TMEM67Q5HYA8 995 aa18.99■□□□□ 0.63
RELA-216ENST00000531238 ANKRD35Q8N283 1001 aa18.99■□□□□ 0.63
RELA-216ENST00000531238 DDX11Q96FC9 970 aa18.99■□□□□ 0.63
RELA-216ENST00000531238 A1CFQ9NQ94 594 aaKnown RBP18.99■□□□□ 0.63
RELA-216ENST00000531238 SLC5A4Q9NY91 659 aa18.99■□□□□ 0.63
RELA-216ENST00000531238 CCPG1Q9ULG6 757 aa18.99■□□□□ 0.63
RELA-216ENST00000531238 PARP1P09874 1014 aaKnown RBP18.98■□□□□ 0.63
RELA-216ENST00000531238 CYBAP13498 195 aa18.98■□□□□ 0.63
RELA-216ENST00000531238 TKFCQ3LXA3 575 aa18.98■□□□□ 0.63
RELA-216ENST00000531238 ASPRV1Q53RT3 343 aa18.98■□□□□ 0.63
RELA-216ENST00000531238 CLEC4DQ8WXI8 215 aa18.98■□□□□ 0.63
RELA-216ENST00000531238 KCNB2Q92953 911 aa18.98■□□□□ 0.63
RELA-216ENST00000531238 PURBQ96QR8 312 aaKnown RBP18.98■□□□□ 0.63
RELA-216ENST00000531238 TINF2Q9BSI4 451 aa18.98■□□□□ 0.63
RELA-216ENST00000531238 LRRC2Q9BYS8 371 aa18.98■□□□□ 0.63
RELA-216ENST00000531238 ACAD9Q9H845 621 aa18.98■□□□□ 0.63
RELA-216ENST00000531238 JMJD4Q9H9V9 463 aa18.98■□□□□ 0.63
RELA-216ENST00000531238 VAT1LQ9HCJ6 419 aa18.98■□□□□ 0.63
RELA-216ENST00000531238 FBXO40Q9UH90 709 aa18.98■□□□□ 0.63
RELA-216ENST00000531238 OGDHLQ9ULD0 1010 aa18.98■□□□□ 0.63
RELA-216ENST00000531238 SOWAHBA6NEL2 793 aa18.97■□□□□ 0.63
RELA-216ENST00000531238 SH2B2O14492 632 aaPredicted RBP18.97■□□□□ 0.63
RELA-216ENST00000531238 SNAI1O95863 264 aaPredicted RBP18.97■□□□□ 0.63
RELA-216ENST00000531238 MCM5P33992 734 aa18.97■□□□□ 0.63
RELA-216ENST00000531238 EXOSC10Q01780 885 aaKnown RBP18.97■□□□□ 0.63
RELA-216ENST00000531238 ASTN1O14525 1302 aa18.97■□□□□ 0.63
RELA-216ENST00000531238 ERICH2A1L162 156 aa18.96■□□□□ 0.63
RELA-216ENST00000531238 KLRF2D3W0D1 207 aa18.96■□□□□ 0.63
RELA-216ENST00000531238 NFIBO00712 420 aa18.96■□□□□ 0.63
RELA-216ENST00000531238 GRM4Q14833 912 aa18.96■□□□□ 0.63
RELA-216ENST00000531238 FAM133AQ8N9E0 248 aa18.96■□□□□ 0.63
RELA-216ENST00000531238 DIS3LQ8TF46 1054 aaKnown RBP18.96■□□□□ 0.63
RELA-216ENST00000531238 NEK1Q96PY6 1258 aa18.96■□□□□ 0.63
RELA-216ENST00000531238 CYP39A1Q9NYL5 469 aa18.96■□□□□ 0.63
RELA-216ENST00000531238 DDX49Q9Y6V7 483 aaKnown RBP18.96■□□□□ 0.63
RELA-216ENST00000531238 DNAH12Q6ZR08 3092 aa18.96■□□□□ 0.63
RELA-216ENST00000531238 ZNF865P0CJ78 1059 aaPredicted RBP18.95■□□□□ 0.62
RELA-216ENST00000531238 CNGA1P29973 690 aa18.95■□□□□ 0.62
RELA-216ENST00000531238 HSPA4P34932 840 aa18.95■□□□□ 0.62
RELA-216ENST00000531238 SART3Q15020 963 aaKnown RBP18.95■□□□□ 0.62
RELA-216ENST00000531238 ANO1Q5XXA6 986 aa18.95■□□□□ 0.62
RELA-216ENST00000531238 MAMDC4Q6UXC1 1216 aa18.95■□□□□ 0.62
RELA-216ENST00000531238 TBC1D5Q92609 795 aa18.95■□□□□ 0.62
RELA-216ENST00000531238 MTMR8Q96EF0 704 aa18.95■□□□□ 0.62
RELA-216ENST00000531238 MTA3Q9BTC8 594 aa18.95■□□□□ 0.62
RELA-216ENST00000531238 MYL10Q9BUA6 226 aa18.95■□□□□ 0.62
RELA-216ENST00000531238 POTEB2H3BUK9 544 aa18.94■□□□□ 0.62
RELA-216ENST00000531238 CYTH3O43739 400 aa18.94■□□□□ 0.62
RELA-216ENST00000531238 CPA1P15085 419 aa18.94■□□□□ 0.62
RELA-216ENST00000531238 BAATQ14032 418 aaPredicted RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms