RNA–Protein interactions for RNA: ENST00000527064.1

NXF1-204, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-204ENST00000527064 RIPK3Q9Y572 518 aa16.83■□□□□ 0.28
NXF1-204ENST00000527064 ANTXR2P58335 489 aa16.82■□□□□ 0.28
NXF1-204ENST00000527064 MAP3K21Q5TCX8 1036 aa16.82■□□□□ 0.28
NXF1-204ENST00000527064 CHST3Q7LGC8 479 aa16.82■□□□□ 0.28
NXF1-204ENST00000527064 CATIPQ7Z7H3 387 aa16.82■□□□□ 0.28
NXF1-204ENST00000527064 ANKRD35Q8N283 1001 aa16.82■□□□□ 0.28
NXF1-204ENST00000527064 NPLOC4Q8TAT6 608 aa16.82■□□□□ 0.28
NXF1-204ENST00000527064 TMEM87BQ96K49 555 aa16.82■□□□□ 0.28
NXF1-204ENST00000527064 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.82■□□□□ 0.28
NXF1-204ENST00000527064 PAK6Q9NQU5 681 aaPredicted RBP16.82■□□□□ 0.28
NXF1-204ENST00000527064 HOMER2Q9NSB8 354 aa16.82■□□□□ 0.28
NXF1-204ENST00000527064 RNF146Q9NTX7 359 aa16.82■□□□□ 0.28
NXF1-204ENST00000527064 DIS3Q9Y2L1 958 aaKnown RBP16.82■□□□□ 0.28
NXF1-204ENST00000527064 BRCA2P51587 3418 aa16.82■□□□□ 0.28
NXF1-204ENST00000527064 EPB41L2O43491 1005 aaKnown RBP16.81■□□□□ 0.28
NXF1-204ENST00000527064 PRC1O43663 620 aa16.81■□□□□ 0.28
NXF1-204ENST00000527064 COBLO75128 1261 aa16.81■□□□□ 0.28
NXF1-204ENST00000527064 GOLGA8HP0CJ92 632 aa16.81■□□□□ 0.28
NXF1-204ENST00000527064 ALAS1P13196 640 aa16.81■□□□□ 0.28
NXF1-204ENST00000527064 GJA8P48165 433 aa16.81■□□□□ 0.28
NXF1-204ENST00000527064 MLLT1Q03111 559 aaPredicted RBP16.81■□□□□ 0.28
NXF1-204ENST00000527064 TSGA10IPQ3SY00 556 aa16.81■□□□□ 0.28
NXF1-204ENST00000527064 TMTC2Q8N394 836 aa16.81■□□□□ 0.28
NXF1-204ENST00000527064 DDX11Q96FC9 970 aa16.81■□□□□ 0.28
NXF1-204ENST00000527064 AGBL1Q96MI9 1066 aa16.81■□□□□ 0.28
NXF1-204ENST00000527064 FLRT1Q9NZU1 646 aa16.81■□□□□ 0.28
NXF1-204ENST00000527064 PFASO15067 1338 aa16.8■□□□□ 0.28
NXF1-204ENST00000527064 WDR19Q8NEZ3 1342 aa16.8■□□□□ 0.28
NXF1-204ENST00000527064 PGK2P07205 417 aa16.8■□□□□ 0.28
NXF1-204ENST00000527064 EN2P19622 333 aaPredicted RBP16.8■□□□□ 0.28
NXF1-204ENST00000527064 SNAP25P60880 206 aa16.8■□□□□ 0.28
NXF1-204ENST00000527064 CACNB2Q08289 660 aaPredicted RBP16.8■□□□□ 0.28
NXF1-204ENST00000527064 TRIM32Q13049 653 aa16.8■□□□□ 0.28
NXF1-204ENST00000527064 IGDCC4Q8TDY8 1250 aa16.8■□□□□ 0.28
NXF1-204ENST00000527064 U2AF1L4Q8WU68 220 aaKnown RBP16.8■□□□□ 0.28
NXF1-204ENST00000527064 MAML3Q96JK9 1138 aa16.8■□□□□ 0.28
NXF1-204ENST00000527064 TRERF1Q96PN7 1200 aa16.8■□□□□ 0.28
NXF1-204ENST00000527064 NEK1Q96PY6 1258 aa16.8■□□□□ 0.28
NXF1-204ENST00000527064 DHX16O60231 1041 aaKnown RBP16.79■□□□□ 0.28
NXF1-204ENST00000527064 DDAH1O94760 285 aa16.79■□□□□ 0.28
NXF1-204ENST00000527064 SGPL1O95470 568 aa16.79■□□□□ 0.28
NXF1-204ENST00000527064 HMGB1P09429 215 aaKnown RBP16.79■□□□□ 0.28
NXF1-204ENST00000527064 GRM4Q14833 912 aa16.79■□□□□ 0.28
NXF1-204ENST00000527064 ZNF792Q3KQV3 632 aa16.79■□□□□ 0.28
NXF1-204ENST00000527064 NFXL1Q6ZNB6 911 aa16.79■□□□□ 0.28
NXF1-204ENST00000527064 MSL3Q8N5Y2 521 aaKnown RBP16.79■□□□□ 0.28
NXF1-204ENST00000527064 DEFB118Q96PH6 123 aa16.79■□□□□ 0.28
NXF1-204ENST00000527064 LY9Q9HBG7 655 aa16.79■□□□□ 0.28
NXF1-204ENST00000527064 CCDC69A6NI79 296 aa16.78■□□□□ 0.28
NXF1-204ENST00000527064 SH2B2O14492 632 aaPredicted RBP16.78■□□□□ 0.28
NXF1-204ENST00000527064 EIF5BO60841 1220 aaKnown RBP16.78■□□□□ 0.28
NXF1-204ENST00000527064 IGHA2P01877 340 aa16.78■□□□□ 0.28
NXF1-204ENST00000527064 HSPA4P34932 840 aa16.78■□□□□ 0.28
NXF1-204ENST00000527064 LIFRP42702 1097 aa16.78■□□□□ 0.28
NXF1-204ENST00000527064 CDC37Q16543 378 aaPredicted RBP16.78■□□□□ 0.28
NXF1-204ENST00000527064 ADGRF4Q8IZF3 695 aa16.78■□□□□ 0.28
NXF1-204ENST00000527064 MAP3K14Q99558 947 aa16.78■□□□□ 0.28
NXF1-204ENST00000527064 UBA5Q9GZZ9 404 aa16.78■□□□□ 0.28
NXF1-204ENST00000527064 NRBP1Q9UHY1 535 aa16.78■□□□□ 0.28
NXF1-204ENST00000527064 MAD2L2Q9UI95 211 aa16.78■□□□□ 0.28
NXF1-204ENST00000527064 DNAJC25-GNG10A0A024R161 153 aa16.77■□□□□ 0.28
NXF1-204ENST00000527064 PALM3A6NDB9 673 aaPredicted RBP16.77■□□□□ 0.28
NXF1-204ENST00000527064 MSCO60682 206 aa16.77■□□□□ 0.28
NXF1-204ENST00000527064 CALM1P0DP23 149 aa16.77■□□□□ 0.28
NXF1-204ENST00000527064 CALM2P0DP24 149 aa16.77■□□□□ 0.28
NXF1-204ENST00000527064 CALM3P0DP25 149 aa16.77■□□□□ 0.28
NXF1-204ENST00000527064 KIF5BP33176 963 aa16.77■□□□□ 0.28
NXF1-204ENST00000527064 CYP2C19P33261 490 aa16.77■□□□□ 0.28
NXF1-204ENST00000527064 TROAPQ12815 778 aa16.77■□□□□ 0.28
NXF1-204ENST00000527064 ZNF467Q7Z7K2 595 aaPredicted RBP16.77■□□□□ 0.28
NXF1-204ENST00000527064 RASEFQ8IZ41 740 aa16.77■□□□□ 0.28
NXF1-204ENST00000527064 ZNF654Q8IZM8 581 aa16.77■□□□□ 0.28
NXF1-204ENST00000527064 CTCFLQ8NI51 663 aaPredicted RBP16.77■□□□□ 0.28
NXF1-204ENST00000527064 KCNB2Q92953 911 aa16.77■□□□□ 0.28
NXF1-204ENST00000527064 SHISA4Q96DD7 197 aa16.77■□□□□ 0.28
NXF1-204ENST00000527064 TINF2Q9BSI4 451 aa16.77■□□□□ 0.28
NXF1-204ENST00000527064 SENP2Q9HC62 589 aa16.77■□□□□ 0.28
NXF1-204ENST00000527064 A1CFQ9NQ94 594 aaKnown RBP16.77■□□□□ 0.28
NXF1-204ENST00000527064 PLXNA1Q9UIW2 1896 aa16.77■□□□□ 0.27
NXF1-204ENST00000527064 SYNGAP1Q96PV0 1343 aa16.76■□□□□ 0.27
NXF1-204ENST00000527064 KLRF2D3W0D1 207 aa16.76■□□□□ 0.27
NXF1-204ENST00000527064 POTEB2H3BUK9 544 aa16.76■□□□□ 0.27
NXF1-204ENST00000527064 TFRCP02786 760 aaKnown RBP16.76■□□□□ 0.27
NXF1-204ENST00000527064 CYBAP13498 195 aa16.76■□□□□ 0.27
NXF1-204ENST00000527064 CCND3P30281 292 aaPredicted RBP16.76■□□□□ 0.27
NXF1-204ENST00000527064 DHX32Q7L7V1 743 aaKnown RBP16.76■□□□□ 0.27
NXF1-204ENST00000527064 STAG2Q8N3U4 1231 aa16.76■□□□□ 0.27
NXF1-204ENST00000527064 NUP133Q8WUM0 1156 aa16.76■□□□□ 0.27
NXF1-204ENST00000527064 CRISPLD2Q9H0B8 497 aa16.76■□□□□ 0.27
NXF1-204ENST00000527064 CPVLQ9H3G5 476 aa16.76■□□□□ 0.27
NXF1-204ENST00000527064 ABCB11O95342 1321 aa16.75■□□□□ 0.27
NXF1-204ENST00000527064 ZNFX1Q9P2E3 1918 aaKnown RBP16.75■□□□□ 0.27
NXF1-204ENST00000527064 CNGA1P29973 690 aa16.75■□□□□ 0.27
NXF1-204ENST00000527064 TRAF1Q13077 416 aa16.75■□□□□ 0.27
NXF1-204ENST00000527064 ADCK5Q3MIX3 580 aa16.75■□□□□ 0.27
NXF1-204ENST00000527064 MUM1L1Q5H9M0 696 aa16.75■□□□□ 0.27
NXF1-204ENST00000527064 MAMDC4Q6UXC1 1216 aa16.75■□□□□ 0.27
NXF1-204ENST00000527064 NSMFQ6X4W1 530 aa16.75■□□□□ 0.27
NXF1-204ENST00000527064 SYNE3Q6ZMZ3 975 aa16.75■□□□□ 0.27
NXF1-204ENST00000527064 SGMS1Q86VZ5 419 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms