RNA–Protein interactions for RNA: ENST00000515198.5

PTCD2-210, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 5

Gene PTCD2, Length 881 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-210ENST00000515198 PNMA2Q9UL42 364 aa14.6□□□□□ -0.07
PTCD2-210ENST00000515198 RIPK3Q9Y572 518 aa14.6□□□□□ -0.07
PTCD2-210ENST00000515198 PLXNA1Q9UIW2 1896 aa14.6□□□□□ -0.07
PTCD2-210ENST00000515198 RPTORQ8N122 1335 aa14.6□□□□□ -0.07
PTCD2-210ENST00000515198 PRC1O43663 620 aa14.59□□□□□ -0.07
PTCD2-210ENST00000515198 COBLO75128 1261 aa14.59□□□□□ -0.07
PTCD2-210ENST00000515198 GOLGA8HP0CJ92 632 aa14.59□□□□□ -0.07
PTCD2-210ENST00000515198 PRKAR2AP13861 404 aaKnown RBP14.59□□□□□ -0.07
PTCD2-210ENST00000515198 CAPN2P17655 700 aa14.59□□□□□ -0.07
PTCD2-210ENST00000515198 MCM5P33992 734 aa14.59□□□□□ -0.07
PTCD2-210ENST00000515198 ANTXR2P58335 489 aa14.59□□□□□ -0.07
PTCD2-210ENST00000515198 SNAP25P60880 206 aa14.59□□□□□ -0.07
PTCD2-210ENST00000515198 MLLT1Q03111 559 aaPredicted RBP14.59□□□□□ -0.07
PTCD2-210ENST00000515198 TRIM32Q13049 653 aa14.59□□□□□ -0.07
PTCD2-210ENST00000515198 OLFML2BQ68BL8 750 aa14.59□□□□□ -0.07
PTCD2-210ENST00000515198 CHST3Q7LGC8 479 aa14.59□□□□□ -0.07
PTCD2-210ENST00000515198 AGBL1Q96MI9 1066 aa14.59□□□□□ -0.07
PTCD2-210ENST00000515198 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.59□□□□□ -0.07
PTCD2-210ENST00000515198 RANBP17Q9H2T7 1088 aaKnown RBP14.59□□□□□ -0.07
PTCD2-210ENST00000515198 ACAD9Q9H845 621 aa14.59□□□□□ -0.07
PTCD2-210ENST00000515198 HOMER2Q9NSB8 354 aa14.59□□□□□ -0.07
PTCD2-210ENST00000515198 CCPG1Q9ULG6 757 aa14.59□□□□□ -0.07
PTCD2-210ENST00000515198 ZNF536O15090 1300 aa14.59□□□□□ -0.07
PTCD2-210ENST00000515198 ICAM1P05362 532 aa14.58□□□□□ -0.08
PTCD2-210ENST00000515198 ALAS1P13196 640 aa14.58□□□□□ -0.08
PTCD2-210ENST00000515198 EN2P19622 333 aaPredicted RBP14.58□□□□□ -0.08
PTCD2-210ENST00000515198 GJA8P48165 433 aa14.58□□□□□ -0.08
PTCD2-210ENST00000515198 CACNB2Q08289 660 aaPredicted RBP14.58□□□□□ -0.08
PTCD2-210ENST00000515198 KRT32Q14532 448 aa14.58□□□□□ -0.08
PTCD2-210ENST00000515198 MAP3K21Q5TCX8 1036 aa14.58□□□□□ -0.08
PTCD2-210ENST00000515198 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.58□□□□□ -0.08
PTCD2-210ENST00000515198 ANKRD35Q8N283 1001 aa14.58□□□□□ -0.08
PTCD2-210ENST00000515198 TMTC2Q8N394 836 aa14.58□□□□□ -0.08
PTCD2-210ENST00000515198 IGDCC4Q8TDY8 1250 aa14.58□□□□□ -0.08
PTCD2-210ENST00000515198 U2AF1L4Q8WU68 220 aaKnown RBP14.58□□□□□ -0.08
PTCD2-210ENST00000515198 MAML3Q96JK9 1138 aa14.58□□□□□ -0.08
PTCD2-210ENST00000515198 TMEM87BQ96K49 555 aa14.58□□□□□ -0.08
PTCD2-210ENST00000515198 PAK6Q9NQU5 681 aaPredicted RBP14.58□□□□□ -0.08
PTCD2-210ENST00000515198 RNF146Q9NTX7 359 aa14.58□□□□□ -0.08
PTCD2-210ENST00000515198 FLRT1Q9NZU1 646 aa14.58□□□□□ -0.08
PTCD2-210ENST00000515198 DIS3Q9Y2L1 958 aaKnown RBP14.58□□□□□ -0.08
PTCD2-210ENST00000515198 HTTP42858 3142 aa14.58□□□□□ -0.08
PTCD2-210ENST00000515198 DHX16O60231 1041 aaKnown RBP14.57□□□□□ -0.08
PTCD2-210ENST00000515198 SGPL1O95470 568 aa14.57□□□□□ -0.08
PTCD2-210ENST00000515198 PGK2P07205 417 aa14.57□□□□□ -0.08
PTCD2-210ENST00000515198 ZNF792Q3KQV3 632 aa14.57□□□□□ -0.08
PTCD2-210ENST00000515198 TSGA10IPQ3SY00 556 aa14.57□□□□□ -0.08
PTCD2-210ENST00000515198 CATIPQ7Z7H3 387 aa14.57□□□□□ -0.08
PTCD2-210ENST00000515198 DEFB118Q96PH6 123 aa14.57□□□□□ -0.08
PTCD2-210ENST00000515198 TRERF1Q96PN7 1200 aa14.57□□□□□ -0.08
PTCD2-210ENST00000515198 NEK1Q96PY6 1258 aa14.57□□□□□ -0.08
PTCD2-210ENST00000515198 UBA5Q9GZZ9 404 aa14.57□□□□□ -0.08
PTCD2-210ENST00000515198 KLRF2D3W0D1 207 aa14.56□□□□□ -0.08
PTCD2-210ENST00000515198 EPB41L2O43491 1005 aaKnown RBP14.56□□□□□ -0.08
PTCD2-210ENST00000515198 CYP2C19P33261 490 aa14.56□□□□□ -0.08
PTCD2-210ENST00000515198 NFXL1Q6ZNB6 911 aa14.56□□□□□ -0.08
PTCD2-210ENST00000515198 LY9Q9HBG7 655 aa14.56□□□□□ -0.08
PTCD2-210ENST00000515198 PFASO15067 1338 aa14.56□□□□□ -0.08
PTCD2-210ENST00000515198 WDR19Q8NEZ3 1342 aa14.56□□□□□ -0.08
PTCD2-210ENST00000515198 MYH6P13533 1939 aa14.56□□□□□ -0.08
PTCD2-210ENST00000515198 KIAA0100Q14667 2235 aaKnown RBP14.56□□□□□ -0.08
PTCD2-210ENST00000515198 DNAJC25-GNG10A0A024R161 153 aa14.55□□□□□ -0.08
PTCD2-210ENST00000515198 CCDC69A6NI79 296 aa14.55□□□□□ -0.08
PTCD2-210ENST00000515198 SH2B2O14492 632 aaPredicted RBP14.55□□□□□ -0.08
PTCD2-210ENST00000515198 TFRCP02786 760 aaKnown RBP14.55□□□□□ -0.08
PTCD2-210ENST00000515198 HMGB1P09429 215 aaKnown RBP14.55□□□□□ -0.08
PTCD2-210ENST00000515198 HSPA4P34932 840 aa14.55□□□□□ -0.08
PTCD2-210ENST00000515198 GRM4Q14833 912 aa14.55□□□□□ -0.08
PTCD2-210ENST00000515198 RASEFQ8IZ41 740 aa14.55□□□□□ -0.08
PTCD2-210ENST00000515198 ADGRF4Q8IZF3 695 aa14.55□□□□□ -0.08
PTCD2-210ENST00000515198 SHISA4Q96DD7 197 aa14.55□□□□□ -0.08
PTCD2-210ENST00000515198 CPVLQ9H3G5 476 aa14.55□□□□□ -0.08
PTCD2-210ENST00000515198 SENP2Q9HC62 589 aa14.55□□□□□ -0.08
PTCD2-210ENST00000515198 MAD2L2Q9UI95 211 aa14.55□□□□□ -0.08
PTCD2-210ENST00000515198 PALM3A6NDB9 673 aaPredicted RBP14.54□□□□□ -0.08
PTCD2-210ENST00000515198 MSCO60682 206 aa14.54□□□□□ -0.08
PTCD2-210ENST00000515198 DDAH1O94760 285 aa14.54□□□□□ -0.08
PTCD2-210ENST00000515198 IGHA2P01877 340 aa14.54□□□□□ -0.08
PTCD2-210ENST00000515198 CYBAP13498 195 aa14.54□□□□□ -0.08
PTCD2-210ENST00000515198 CNGA1P29973 690 aa14.54□□□□□ -0.08
PTCD2-210ENST00000515198 CCND3P30281 292 aaPredicted RBP14.54□□□□□ -0.08
PTCD2-210ENST00000515198 LIFRP42702 1097 aa14.54□□□□□ -0.08
PTCD2-210ENST00000515198 TROAPQ12815 778 aa14.54□□□□□ -0.08
PTCD2-210ENST00000515198 CDC37Q16543 378 aaPredicted RBP14.54□□□□□ -0.08
PTCD2-210ENST00000515198 MUM1L1Q5H9M0 696 aa14.54□□□□□ -0.08
PTCD2-210ENST00000515198 NSMFQ6X4W1 530 aa14.54□□□□□ -0.08
PTCD2-210ENST00000515198 ZNF654Q8IZM8 581 aa14.54□□□□□ -0.08
PTCD2-210ENST00000515198 STAG2Q8N3U4 1231 aa14.54□□□□□ -0.08
PTCD2-210ENST00000515198 MSL3Q8N5Y2 521 aaKnown RBP14.54□□□□□ -0.08
PTCD2-210ENST00000515198 CTCFLQ8NI51 663 aaPredicted RBP14.54□□□□□ -0.08
PTCD2-210ENST00000515198 TINF2Q9BSI4 451 aa14.54□□□□□ -0.08
PTCD2-210ENST00000515198 VAT1LQ9HCJ6 419 aa14.54□□□□□ -0.08
PTCD2-210ENST00000515198 A1CFQ9NQ94 594 aaKnown RBP14.54□□□□□ -0.08
PTCD2-210ENST00000515198 FOXD4L1Q9NU39 408 aa14.54□□□□□ -0.08
PTCD2-210ENST00000515198 SMCHD1A6NHR9 2005 aa14.53□□□□□ -0.08
PTCD2-210ENST00000515198 POTEB2H3BUK9 544 aa14.53□□□□□ -0.08
PTCD2-210ENST00000515198 CALM1P0DP23 149 aa14.53□□□□□ -0.08
PTCD2-210ENST00000515198 CALM2P0DP24 149 aa14.53□□□□□ -0.08
PTCD2-210ENST00000515198 CALM3P0DP25 149 aa14.53□□□□□ -0.08
PTCD2-210ENST00000515198 KIF5BP33176 963 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms