RNA–Protein interactions for RNA: ENST00000511752.5

PTCD2-209, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 3

Gene PTCD2, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-209ENST00000511752 PLXNA1Q9UIW2 1896 aa14.6□□□□□ -0.07
PTCD2-209ENST00000511752 RPTORQ8N122 1335 aa14.6□□□□□ -0.07
PTCD2-209ENST00000511752 PRC1O43663 620 aa14.59□□□□□ -0.07
PTCD2-209ENST00000511752 COBLO75128 1261 aa14.59□□□□□ -0.07
PTCD2-209ENST00000511752 GOLGA8HP0CJ92 632 aa14.59□□□□□ -0.07
PTCD2-209ENST00000511752 PRKAR2AP13861 404 aaKnown RBP14.59□□□□□ -0.07
PTCD2-209ENST00000511752 CAPN2P17655 700 aa14.59□□□□□ -0.07
PTCD2-209ENST00000511752 MCM5P33992 734 aa14.59□□□□□ -0.07
PTCD2-209ENST00000511752 ANTXR2P58335 489 aa14.59□□□□□ -0.07
PTCD2-209ENST00000511752 SNAP25P60880 206 aa14.59□□□□□ -0.07
PTCD2-209ENST00000511752 MLLT1Q03111 559 aaPredicted RBP14.59□□□□□ -0.07
PTCD2-209ENST00000511752 TRIM32Q13049 653 aa14.59□□□□□ -0.07
PTCD2-209ENST00000511752 OLFML2BQ68BL8 750 aa14.59□□□□□ -0.07
PTCD2-209ENST00000511752 CHST3Q7LGC8 479 aa14.59□□□□□ -0.07
PTCD2-209ENST00000511752 AGBL1Q96MI9 1066 aa14.59□□□□□ -0.07
PTCD2-209ENST00000511752 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.59□□□□□ -0.07
PTCD2-209ENST00000511752 RANBP17Q9H2T7 1088 aaKnown RBP14.59□□□□□ -0.07
PTCD2-209ENST00000511752 ACAD9Q9H845 621 aa14.59□□□□□ -0.07
PTCD2-209ENST00000511752 HOMER2Q9NSB8 354 aa14.59□□□□□ -0.07
PTCD2-209ENST00000511752 CCPG1Q9ULG6 757 aa14.59□□□□□ -0.07
PTCD2-209ENST00000511752 ZNF536O15090 1300 aa14.59□□□□□ -0.07
PTCD2-209ENST00000511752 ICAM1P05362 532 aa14.58□□□□□ -0.08
PTCD2-209ENST00000511752 ALAS1P13196 640 aa14.58□□□□□ -0.08
PTCD2-209ENST00000511752 EN2P19622 333 aaPredicted RBP14.58□□□□□ -0.08
PTCD2-209ENST00000511752 GJA8P48165 433 aa14.58□□□□□ -0.08
PTCD2-209ENST00000511752 CACNB2Q08289 660 aaPredicted RBP14.58□□□□□ -0.08
PTCD2-209ENST00000511752 KRT32Q14532 448 aa14.58□□□□□ -0.08
PTCD2-209ENST00000511752 MAP3K21Q5TCX8 1036 aa14.58□□□□□ -0.08
PTCD2-209ENST00000511752 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.58□□□□□ -0.08
PTCD2-209ENST00000511752 ANKRD35Q8N283 1001 aa14.58□□□□□ -0.08
PTCD2-209ENST00000511752 TMTC2Q8N394 836 aa14.58□□□□□ -0.08
PTCD2-209ENST00000511752 IGDCC4Q8TDY8 1250 aa14.58□□□□□ -0.08
PTCD2-209ENST00000511752 U2AF1L4Q8WU68 220 aaKnown RBP14.58□□□□□ -0.08
PTCD2-209ENST00000511752 MAML3Q96JK9 1138 aa14.58□□□□□ -0.08
PTCD2-209ENST00000511752 TMEM87BQ96K49 555 aa14.58□□□□□ -0.08
PTCD2-209ENST00000511752 PAK6Q9NQU5 681 aaPredicted RBP14.58□□□□□ -0.08
PTCD2-209ENST00000511752 RNF146Q9NTX7 359 aa14.58□□□□□ -0.08
PTCD2-209ENST00000511752 FLRT1Q9NZU1 646 aa14.58□□□□□ -0.08
PTCD2-209ENST00000511752 DIS3Q9Y2L1 958 aaKnown RBP14.58□□□□□ -0.08
PTCD2-209ENST00000511752 HTTP42858 3142 aa14.58□□□□□ -0.08
PTCD2-209ENST00000511752 DHX16O60231 1041 aaKnown RBP14.57□□□□□ -0.08
PTCD2-209ENST00000511752 SGPL1O95470 568 aa14.57□□□□□ -0.08
PTCD2-209ENST00000511752 PGK2P07205 417 aa14.57□□□□□ -0.08
PTCD2-209ENST00000511752 ZNF792Q3KQV3 632 aa14.57□□□□□ -0.08
PTCD2-209ENST00000511752 TSGA10IPQ3SY00 556 aa14.57□□□□□ -0.08
PTCD2-209ENST00000511752 CATIPQ7Z7H3 387 aa14.57□□□□□ -0.08
PTCD2-209ENST00000511752 DEFB118Q96PH6 123 aa14.57□□□□□ -0.08
PTCD2-209ENST00000511752 TRERF1Q96PN7 1200 aa14.57□□□□□ -0.08
PTCD2-209ENST00000511752 NEK1Q96PY6 1258 aa14.57□□□□□ -0.08
PTCD2-209ENST00000511752 UBA5Q9GZZ9 404 aa14.57□□□□□ -0.08
PTCD2-209ENST00000511752 KLRF2D3W0D1 207 aa14.56□□□□□ -0.08
PTCD2-209ENST00000511752 EPB41L2O43491 1005 aaKnown RBP14.56□□□□□ -0.08
PTCD2-209ENST00000511752 CYP2C19P33261 490 aa14.56□□□□□ -0.08
PTCD2-209ENST00000511752 NFXL1Q6ZNB6 911 aa14.56□□□□□ -0.08
PTCD2-209ENST00000511752 LY9Q9HBG7 655 aa14.56□□□□□ -0.08
PTCD2-209ENST00000511752 PFASO15067 1338 aa14.56□□□□□ -0.08
PTCD2-209ENST00000511752 WDR19Q8NEZ3 1342 aa14.56□□□□□ -0.08
PTCD2-209ENST00000511752 MYH6P13533 1939 aa14.56□□□□□ -0.08
PTCD2-209ENST00000511752 KIAA0100Q14667 2235 aaKnown RBP14.56□□□□□ -0.08
PTCD2-209ENST00000511752 DNAJC25-GNG10A0A024R161 153 aa14.55□□□□□ -0.08
PTCD2-209ENST00000511752 CCDC69A6NI79 296 aa14.55□□□□□ -0.08
PTCD2-209ENST00000511752 SH2B2O14492 632 aaPredicted RBP14.55□□□□□ -0.08
PTCD2-209ENST00000511752 TFRCP02786 760 aaKnown RBP14.55□□□□□ -0.08
PTCD2-209ENST00000511752 HMGB1P09429 215 aaKnown RBP14.55□□□□□ -0.08
PTCD2-209ENST00000511752 HSPA4P34932 840 aa14.55□□□□□ -0.08
PTCD2-209ENST00000511752 GRM4Q14833 912 aa14.55□□□□□ -0.08
PTCD2-209ENST00000511752 RASEFQ8IZ41 740 aa14.55□□□□□ -0.08
PTCD2-209ENST00000511752 ADGRF4Q8IZF3 695 aa14.55□□□□□ -0.08
PTCD2-209ENST00000511752 SHISA4Q96DD7 197 aa14.55□□□□□ -0.08
PTCD2-209ENST00000511752 CPVLQ9H3G5 476 aa14.55□□□□□ -0.08
PTCD2-209ENST00000511752 SENP2Q9HC62 589 aa14.55□□□□□ -0.08
PTCD2-209ENST00000511752 MAD2L2Q9UI95 211 aa14.55□□□□□ -0.08
PTCD2-209ENST00000511752 PALM3A6NDB9 673 aaPredicted RBP14.54□□□□□ -0.08
PTCD2-209ENST00000511752 MSCO60682 206 aa14.54□□□□□ -0.08
PTCD2-209ENST00000511752 DDAH1O94760 285 aa14.54□□□□□ -0.08
PTCD2-209ENST00000511752 IGHA2P01877 340 aa14.54□□□□□ -0.08
PTCD2-209ENST00000511752 CYBAP13498 195 aa14.54□□□□□ -0.08
PTCD2-209ENST00000511752 CNGA1P29973 690 aa14.54□□□□□ -0.08
PTCD2-209ENST00000511752 CCND3P30281 292 aaPredicted RBP14.54□□□□□ -0.08
PTCD2-209ENST00000511752 LIFRP42702 1097 aa14.54□□□□□ -0.08
PTCD2-209ENST00000511752 TROAPQ12815 778 aa14.54□□□□□ -0.08
PTCD2-209ENST00000511752 CDC37Q16543 378 aaPredicted RBP14.54□□□□□ -0.08
PTCD2-209ENST00000511752 MUM1L1Q5H9M0 696 aa14.54□□□□□ -0.08
PTCD2-209ENST00000511752 NSMFQ6X4W1 530 aa14.54□□□□□ -0.08
PTCD2-209ENST00000511752 ZNF654Q8IZM8 581 aa14.54□□□□□ -0.08
PTCD2-209ENST00000511752 STAG2Q8N3U4 1231 aa14.54□□□□□ -0.08
PTCD2-209ENST00000511752 MSL3Q8N5Y2 521 aaKnown RBP14.54□□□□□ -0.08
PTCD2-209ENST00000511752 CTCFLQ8NI51 663 aaPredicted RBP14.54□□□□□ -0.08
PTCD2-209ENST00000511752 TINF2Q9BSI4 451 aa14.54□□□□□ -0.08
PTCD2-209ENST00000511752 VAT1LQ9HCJ6 419 aa14.54□□□□□ -0.08
PTCD2-209ENST00000511752 A1CFQ9NQ94 594 aaKnown RBP14.54□□□□□ -0.08
PTCD2-209ENST00000511752 SMCHD1A6NHR9 2005 aa14.53□□□□□ -0.08
PTCD2-209ENST00000511752 POTEB2H3BUK9 544 aa14.53□□□□□ -0.08
PTCD2-209ENST00000511752 CALM1P0DP23 149 aa14.53□□□□□ -0.08
PTCD2-209ENST00000511752 CALM2P0DP24 149 aa14.53□□□□□ -0.08
PTCD2-209ENST00000511752 CALM3P0DP25 149 aa14.53□□□□□ -0.08
PTCD2-209ENST00000511752 KIF5BP33176 963 aa14.53□□□□□ -0.08
PTCD2-209ENST00000511752 ADCK5Q3MIX3 580 aa14.53□□□□□ -0.08
PTCD2-209ENST00000511752 DHX32Q7L7V1 743 aaKnown RBP14.53□□□□□ -0.08
PTCD2-209ENST00000511752 ZNF467Q7Z7K2 595 aaPredicted RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms