RNA–Protein interactions for RNA: ENST00000494655.5

CCDC12-207, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-207ENST00000494655 PAK6Q9NQU5 681 aaPredicted RBP24.28■■□□□ 1.48
CCDC12-207ENST00000494655 DHX16O60231 1041 aaKnown RBP24.27■■□□□ 1.48
CCDC12-207ENST00000494655 ICAM1P05362 532 aa24.27■■□□□ 1.48
CCDC12-207ENST00000494655 ALAS1P13196 640 aa24.27■■□□□ 1.48
CCDC12-207ENST00000494655 MCM5P33992 734 aa24.27■■□□□ 1.48
CCDC12-207ENST00000494655 NECTIN1Q15223 517 aa24.27■■□□□ 1.48
CCDC12-207ENST00000494655 MAP3K21Q5TCX8 1036 aa24.27■■□□□ 1.48
CCDC12-207ENST00000494655 TTBK2Q6IQ55 1244 aa24.27■■□□□ 1.48
CCDC12-207ENST00000494655 MB21D2Q8IYB1 491 aaPredicted RBP24.27■■□□□ 1.48
CCDC12-207ENST00000494655 NPLOC4Q8TAT6 608 aa24.27■■□□□ 1.48
CCDC12-207ENST00000494655 RANBP17Q9H2T7 1088 aaKnown RBP24.27■■□□□ 1.48
CCDC12-207ENST00000494655 RNF146Q9NTX7 359 aa24.27■■□□□ 1.48
CCDC12-207ENST00000494655 RIPK3Q9Y572 518 aa24.27■■□□□ 1.48
CCDC12-207ENST00000494655 TAF6LQ9Y6J9 622 aa24.27■■□□□ 1.48
CCDC12-207ENST00000494655 GOLGA8HP0CJ92 632 aa24.26■■□□□ 1.47
CCDC12-207ENST00000494655 CACNB2Q08289 660 aaPredicted RBP24.26■■□□□ 1.47
CCDC12-207ENST00000494655 TRIM32Q13049 653 aa24.26■■□□□ 1.47
CCDC12-207ENST00000494655 SEC23AQ15436 765 aa24.26■■□□□ 1.47
CCDC12-207ENST00000494655 MTA3Q9BTC8 594 aa24.26■■□□□ 1.47
CCDC12-207ENST00000494655 DIS3Q9Y2L1 958 aaKnown RBP24.26■■□□□ 1.47
CCDC12-207ENST00000494655 COBLO75128 1261 aa24.25■■□□□ 1.47
CCDC12-207ENST00000494655 SGPL1O95470 568 aa24.25■■□□□ 1.47
CCDC12-207ENST00000494655 PGK2P07205 417 aa24.25■■□□□ 1.47
CCDC12-207ENST00000494655 KRT32Q14532 448 aa24.25■■□□□ 1.47
CCDC12-207ENST00000494655 CATIPQ7Z7H3 387 aa24.25■■□□□ 1.47
CCDC12-207ENST00000494655 MAML3Q96JK9 1138 aa24.25■■□□□ 1.47
CCDC12-207ENST00000494655 AGBL1Q96MI9 1066 aa24.25■■□□□ 1.47
CCDC12-207ENST00000494655 PFASO15067 1338 aa24.25■■□□□ 1.47
CCDC12-207ENST00000494655 ZNF536O15090 1300 aa24.25■■□□□ 1.47
CCDC12-207ENST00000494655 PRC1O43663 620 aa24.24■■□□□ 1.47
CCDC12-207ENST00000494655 TFRCP02786 760 aaKnown RBP24.24■■□□□ 1.47
CCDC12-207ENST00000494655 SNAP25P60880 206 aa24.24■■□□□ 1.47
CCDC12-207ENST00000494655 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.24■■□□□ 1.47
CCDC12-207ENST00000494655 CHST3Q7LGC8 479 aa24.24■■□□□ 1.47
CCDC12-207ENST00000494655 TMEM87BQ96K49 555 aa24.24■■□□□ 1.47
CCDC12-207ENST00000494655 TRERF1Q96PN7 1200 aa24.24■■□□□ 1.47
CCDC12-207ENST00000494655 FLRT1Q9NZU1 646 aa24.24■■□□□ 1.47
CCDC12-207ENST00000494655 CYP2C19P33261 490 aa24.23■■□□□ 1.47
CCDC12-207ENST00000494655 MYH6P13533 1939 aa24.23■■□□□ 1.47
CCDC12-207ENST00000494655 WDR19Q8NEZ3 1342 aa24.22■■□□□ 1.47
CCDC12-207ENST00000494655 MSCO60682 206 aa24.22■■□□□ 1.47
CCDC12-207ENST00000494655 CNGA1P29973 690 aa24.22■■□□□ 1.47
CCDC12-207ENST00000494655 NFXL1Q6ZNB6 911 aa24.22■■□□□ 1.47
CCDC12-207ENST00000494655 FRMPD3Q5JV73 1810 aa24.21■■□□□ 1.47
CCDC12-207ENST00000494655 ANTXR2P58335 489 aa24.21■■□□□ 1.47
CCDC12-207ENST00000494655 ZNF792Q3KQV3 632 aa24.21■■□□□ 1.47
CCDC12-207ENST00000494655 TMTC2Q8N394 836 aa24.21■■□□□ 1.47
CCDC12-207ENST00000494655 MSL3Q8N5Y2 521 aaKnown RBP24.21■■□□□ 1.47
CCDC12-207ENST00000494655 SHISA4Q96DD7 197 aa24.21■■□□□ 1.47
CCDC12-207ENST00000494655 CNPY2Q9Y2B0 182 aa24.21■■□□□ 1.47
CCDC12-207ENST00000494655 CCDC69A6NI79 296 aa24.2■■□□□ 1.46
CCDC12-207ENST00000494655 POTEB2H3BUK9 544 aa24.2■■□□□ 1.46
CCDC12-207ENST00000494655 FARP2O94887 1054 aaPredicted RBP24.2■■□□□ 1.46
CCDC12-207ENST00000494655 CCND3P30281 292 aaPredicted RBP24.2■■□□□ 1.46
CCDC12-207ENST00000494655 CDC37Q16543 378 aaPredicted RBP24.2■■□□□ 1.46
CCDC12-207ENST00000494655 NEK1Q96PY6 1258 aa24.2■■□□□ 1.46
CCDC12-207ENST00000494655 TINF2Q9BSI4 451 aa24.2■■□□□ 1.46
CCDC12-207ENST00000494655 UBA5Q9GZZ9 404 aa24.2■■□□□ 1.46
CCDC12-207ENST00000494655 NRBP1Q9UHY1 535 aa24.2■■□□□ 1.46
CCDC12-207ENST00000494655 KLRF2D3W0D1 207 aa24.19■■□□□ 1.46
CCDC12-207ENST00000494655 DDAH1O94760 285 aa24.19■■□□□ 1.46
CCDC12-207ENST00000494655 HMGB1P09429 215 aaKnown RBP24.19■■□□□ 1.46
CCDC12-207ENST00000494655 CYBAP13498 195 aa24.19■■□□□ 1.46
CCDC12-207ENST00000494655 GRM4Q14833 912 aa24.19■■□□□ 1.46
CCDC12-207ENST00000494655 NSMFQ6X4W1 530 aa24.19■■□□□ 1.46
CCDC12-207ENST00000494655 ZNF467Q7Z7K2 595 aaPredicted RBP24.19■■□□□ 1.46
CCDC12-207ENST00000494655 ADGRF4Q8IZF3 695 aa24.19■■□□□ 1.46
CCDC12-207ENST00000494655 ANKLE1Q8NAG6 615 aa24.19■■□□□ 1.46
CCDC12-207ENST00000494655 CTCFLQ8NI51 663 aaPredicted RBP24.19■■□□□ 1.46
CCDC12-207ENST00000494655 CRISPLD2Q9H0B8 497 aa24.19■■□□□ 1.46
CCDC12-207ENST00000494655 A1CFQ9NQ94 594 aaKnown RBP24.19■■□□□ 1.46
CCDC12-207ENST00000494655 DNAJC25-GNG10A0A024R161 153 aa24.18■■□□□ 1.46
CCDC12-207ENST00000494655 KIF5BP33176 963 aa24.18■■□□□ 1.46
CCDC12-207ENST00000494655 IGDCC4Q8TDY8 1250 aa24.18■■□□□ 1.46
CCDC12-207ENST00000494655 NUP133Q8WUM0 1156 aa24.18■■□□□ 1.46
CCDC12-207ENST00000494655 CPVLQ9H3G5 476 aa24.18■■□□□ 1.46
CCDC12-207ENST00000494655 LY9Q9HBG7 655 aa24.18■■□□□ 1.46
CCDC12-207ENST00000494655 DDX20Q9UHI6 824 aaKnown RBP24.18■■□□□ 1.46
CCDC12-207ENST00000494655 SYNGAP1Q96PV0 1343 aa24.17■■□□□ 1.46
CCDC12-207ENST00000494655 SH2B2O14492 632 aaPredicted RBP24.17■■□□□ 1.46
CCDC12-207ENST00000494655 EPB41L2O43491 1005 aaKnown RBP24.17■■□□□ 1.46
CCDC12-207ENST00000494655 CALM1P0DP23 149 aa24.17■■□□□ 1.46
CCDC12-207ENST00000494655 CALM2P0DP24 149 aa24.17■■□□□ 1.46
CCDC12-207ENST00000494655 CALM3P0DP25 149 aa24.17■■□□□ 1.46
CCDC12-207ENST00000494655 USH1GQ495M9 461 aa24.17■■□□□ 1.46
CCDC12-207ENST00000494655 ZNF654Q8IZM8 581 aa24.17■■□□□ 1.46
CCDC12-207ENST00000494655 ABCB11O95342 1321 aa24.16■■□□□ 1.46
CCDC12-207ENST00000494655 EIF5BO60841 1220 aaKnown RBP24.16■■□□□ 1.46
CCDC12-207ENST00000494655 LIFRP42702 1097 aa24.16■■□□□ 1.46
CCDC12-207ENST00000494655 FGD1P98174 961 aa24.16■■□□□ 1.46
CCDC12-207ENST00000494655 TRAF1Q13077 416 aa24.16■■□□□ 1.46
CCDC12-207ENST00000494655 TSGA10IPQ3SY00 556 aa24.16■■□□□ 1.46
CCDC12-207ENST00000494655 MUM1L1Q5H9M0 696 aa24.16■■□□□ 1.46
CCDC12-207ENST00000494655 SYNE3Q6ZMZ3 975 aa24.16■■□□□ 1.46
CCDC12-207ENST00000494655 VAT1LQ9HCJ6 419 aa24.16■■□□□ 1.46
CCDC12-207ENST00000494655 MAD2L2Q9UI95 211 aa24.16■■□□□ 1.46
CCDC12-207ENST00000494655 SLC12A7Q9Y666 1083 aa24.16■■□□□ 1.46
CCDC12-207ENST00000494655 BRCA2P51587 3418 aa24.15■■□□□ 1.46
CCDC12-207ENST00000494655 PTPDC1A2A3K4 754 aa24.15■■□□□ 1.46
CCDC12-207ENST00000494655 PALM3A6NDB9 673 aaPredicted RBP24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms